RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 ZNF626Q68DY1 528 aa3.99□□□□□ -1.77
SFPQ-209ENST00000485454 FCRL6Q6DN72 434 aa3.99□□□□□ -1.77
SFPQ-209ENST00000485454 PPP4R4Q6NUP7 873 aa3.99□□□□□ -1.77
SFPQ-209ENST00000485454 CATSPERGQ6ZRH7 1159 aa3.99□□□□□ -1.77
SFPQ-209ENST00000485454 KCTD20Q7Z5Y7 419 aa3.99□□□□□ -1.77
SFPQ-209ENST00000485454 YTHDF3Q7Z739 585 aaKnown RBP3.99□□□□□ -1.77
SFPQ-209ENST00000485454 SFTPA1Q8IWL2 248 aa3.99□□□□□ -1.77
SFPQ-209ENST00000485454 GALNT4Q8N4A0 578 aa3.99□□□□□ -1.77
SFPQ-209ENST00000485454 RITA1Q96K30 269 aa3.99□□□□□ -1.77
SFPQ-209ENST00000485454 ZNF778Q96MU6 729 aa3.99□□□□□ -1.77
SFPQ-209ENST00000485454 VN1R3Q9BXE9 311 aa3.99□□□□□ -1.77
SFPQ-209ENST00000485454 CIPCQ9C0C6 399 aa3.99□□□□□ -1.77
SFPQ-209ENST00000485454 BHMT2Q9H2M3 363 aa3.99□□□□□ -1.77
SFPQ-209ENST00000485454 DHX36Q9H2U1 1008 aaKnown RBP3.99□□□□□ -1.77
SFPQ-209ENST00000485454 ZNF287Q9HBT7 754 aa3.99□□□□□ -1.77
SFPQ-209ENST00000485454 TFCP2L1Q9NZI6 479 aa3.99□□□□□ -1.77
SFPQ-209ENST00000485454 COL20A1Q9P218 1284 aa3.99□□□□□ -1.77
SFPQ-209ENST00000485454 RGS17Q9UGC6 210 aaPredicted RBP3.99□□□□□ -1.77
SFPQ-209ENST00000485454 HDAC9Q9UKV0 1011 aa3.99□□□□□ -1.77
SFPQ-209ENST00000485454 FRMPD2Q68DX3 1309 aaPredicted RBP3.98□□□□□ -1.77
SFPQ-209ENST00000485454 RRP9O43818 475 aaKnown RBP3.98□□□□□ -1.77
SFPQ-209ENST00000485454 CHRM5P08912 532 aaPredicted RBP3.98□□□□□ -1.77
SFPQ-209ENST00000485454 PTDSS1P48651 473 aaKnown RBP3.98□□□□□ -1.77
SFPQ-209ENST00000485454 MTHFSP49914 203 aa3.98□□□□□ -1.77
SFPQ-209ENST00000485454 TIRAPP58753 221 aa3.98□□□□□ -1.77
SFPQ-209ENST00000485454 PSG6Q00889 435 aa3.98□□□□□ -1.77
SFPQ-209ENST00000485454 SLC29A2Q14542 456 aa3.98□□□□□ -1.77
SFPQ-209ENST00000485454 NPY5RQ15761 445 aa3.98□□□□□ -1.77
SFPQ-209ENST00000485454 ZNF750Q32MQ0 723 aa3.98□□□□□ -1.77
SFPQ-209ENST00000485454 PAPD7Q5XG87 772 aaKnown RBP3.98□□□□□ -1.77
SFPQ-209ENST00000485454 SLC18B1Q6NT16 456 aa3.98□□□□□ -1.77
SFPQ-209ENST00000485454 SERPINA13PQ6UXR4 307 aa3.98□□□□□ -1.77
SFPQ-209ENST00000485454 SESTD1Q86VW0 696 aa3.98□□□□□ -1.77
SFPQ-209ENST00000485454 C8orf58Q8NAV2 365 aa3.98□□□□□ -1.77
SFPQ-209ENST00000485454 SMCR8Q8TEV9 937 aaPredicted RBP3.98□□□□□ -1.77
SFPQ-209ENST00000485454 TSR2Q969E8 191 aaKnown RBP3.98□□□□□ -1.77
SFPQ-209ENST00000485454 C5orf34Q96MH7 638 aa3.98□□□□□ -1.77
SFPQ-209ENST00000485454 SH2D3AQ9BRG2 576 aa3.98□□□□□ -1.77
SFPQ-209ENST00000485454 QTRT1Q9BXR0 403 aaKnown RBP3.98□□□□□ -1.77
SFPQ-209ENST00000485454 CHST8Q9H2A9 424 aa3.98□□□□□ -1.77
SFPQ-209ENST00000485454 RAB27BO00194 218 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 PIAS2O75928 621 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 USP1O94782 785 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 TXNP10599 105 aaKnown RBP3.97□□□□□ -1.77
SFPQ-209ENST00000485454 ACVR2AP27037 513 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 PEX2P28328 305 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 CPT1AP50416 773 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 ALDH5A1P51649 535 aaPredicted RBP3.97□□□□□ -1.77
SFPQ-209ENST00000485454 ITGA8P53708 1063 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 TIAL1Q01085 375 aaKnown RBP eCLIP3.97□□□□□ -1.77
SFPQ-209ENST00000485454 SUPT20HL1Q3ZLR7 823 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 MORN5Q5VZ52 161 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 DENND2CQ68D51 928 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 ZNF425Q6IV72 752 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 PTCHD4Q6ZW05 846 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 C14orf80Q86SX3 495 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 YAF2Q8IY57 180 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 GALNT16Q8N428 558 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 TTC8Q8TAM2 541 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 ADAMTS18Q8TE60 1221 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 SCARB1Q8WTV0 552 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 CTHRC1Q96CG8 243 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 ZBTB45Q96K62 511 aaPredicted RBP3.97□□□□□ -1.77
SFPQ-209ENST00000485454 FYTTD1Q96QD9 318 aaKnown RBP3.97□□□□□ -1.77
SFPQ-209ENST00000485454 MMS19Q96T76 1030 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 TRIM36Q9NQ86 728 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 PRDM11Q9NQV5 511 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 OBP2AQ9NY56 170 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 MID2Q9UJV3 735 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 BTBD3Q9Y2F9 522 aa3.97□□□□□ -1.77
SFPQ-209ENST00000485454 TCRBV5S1A1TA0A578 114 aa3.96□□□□□ -1.78
SFPQ-209ENST00000485454 AQP7P3A6NL99 342 aa3.96□□□□□ -1.78
SFPQ-209ENST00000485454 BTBD19C9JJ37 291 aa3.96□□□□□ -1.78
SFPQ-209ENST00000485454 GCATO75600 419 aa3.96□□□□□ -1.78
SFPQ-209ENST00000485454 INMTO95050 263 aa3.96□□□□□ -1.78
SFPQ-209ENST00000485454 CYP2A6P11509 494 aaPredicted RBP3.96□□□□□ -1.78
SFPQ-209ENST00000485454 HGFP14210 728 aa3.96□□□□□ -1.78
SFPQ-209ENST00000485454 IL1R1P14778 569 aa3.96□□□□□ -1.78
SFPQ-209ENST00000485454 PHKG2P15735 406 aa3.96□□□□□ -1.78
SFPQ-209ENST00000485454 TPH1P17752 444 aa3.96□□□□□ -1.78
SFPQ-209ENST00000485454 RHCEP18577 417 aa3.96□□□□□ -1.78
SFPQ-209ENST00000485454 RPL17P18621 184 aaKnown RBP3.96□□□□□ -1.78
SFPQ-209ENST00000485454 PGDP52209 483 aa3.96□□□□□ -1.78
SFPQ-209ENST00000485454 RHDQ02161 417 aa3.96□□□□□ -1.78
SFPQ-209ENST00000485454 LMAN2Q12907 356 aa3.96□□□□□ -1.78
SFPQ-209ENST00000485454 SEMA5AQ13591 1074 aa3.96□□□□□ -1.78
SFPQ-209ENST00000485454 FAM187BQ17R55 369 aa3.96□□□□□ -1.78
SFPQ-209ENST00000485454 C4orf46Q504U0 113 aa3.96□□□□□ -1.78
SFPQ-209ENST00000485454 MIS18BP1Q6P0N0 1132 aa3.96□□□□□ -1.78
SFPQ-209ENST00000485454 BCDIN3DQ7Z5W3 292 aaKnown RBP3.96□□□□□ -1.78
SFPQ-209ENST00000485454 IPCEF1Q8WWN9 437 aaPredicted RBP3.96□□□□□ -1.78
SFPQ-209ENST00000485454 RPL36ALQ969Q0 106 aaKnown RBP3.96□□□□□ -1.78
SFPQ-209ENST00000485454 ZNF668Q96K58 619 aaPredicted RBP3.96□□□□□ -1.78
SFPQ-209ENST00000485454 MSLNLQ96KJ4 702 aa3.96□□□□□ -1.78
SFPQ-209ENST00000485454 CCDC17Q96LX7 622 aa3.96□□□□□ -1.78
SFPQ-209ENST00000485454 FAM83DQ9H4H8 585 aa3.96□□□□□ -1.78
SFPQ-209ENST00000485454 SNX15Q9NRS6 342 aa3.96□□□□□ -1.78
SFPQ-209ENST00000485454 ASIC5Q9NY37 505 aa3.96□□□□□ -1.78
SFPQ-209ENST00000485454 DKK4Q9UBT3 224 aa3.96□□□□□ -1.78
SFPQ-209ENST00000485454 ITGB1BP2Q9UKP3 347 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms