RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 RGMAQ96B86 450 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 TMEM41AQ96HV5 264 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 FAM46AQ96IP4 442 aaKnown RBP6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 PPP1R16BQ96T49 567 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 RMDN3Q96TC7 470 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 SSBP4Q9BWG4 385 aaPredicted RBP6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 ZMYND12Q9H0C1 365 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 OGDHLQ9ULD0 1010 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 FAM184BQ9ULE4 1060 aa6.15□□□□□ -1.42
NHLRC3-205ENST00000485407 STK36Q9NRP7 1315 aa6.15□□□□□ -1.43
NHLRC3-205ENST00000485407 KIAA1217Q5T5P2 1943 aa6.15□□□□□ -1.43
NHLRC3-205ENST00000485407 A0A088AWK7 358 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 A0A1B0GVC2 190 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 FOXN3O00409 490 aaPredicted RBP6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 DDX3XO00571 662 aaKnown RBP eCLIP6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 MEIS2O14770 477 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 FIBPO43427 364 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 DUSP11O75319 330 aaKnown RBP6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 H2AFB1P0C5Y9 115 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 H2AFB2P0C5Z0 115 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 TGFB3P10600 412 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 RARBP10826 455 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 XBP1P17861 261 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 NAPAP54920 295 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 NKX3-2P78367 333 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 IL10RAQ13651 578 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 TRIM25Q14258 630 aaKnown RBP6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 STXBP2Q15833 593 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 PKN1Q16512 942 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 ME3Q16798 604 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 PRSS36Q5K4E3 855 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 TTC38Q5R3I4 469 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 THEMIS2Q5TEJ8 643 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 MROH9Q5TGP6 573 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 ARHGEF16Q5VV41 709 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 PRAMEF9Q5VWM5 478 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 FAM180BQ6P0A1 224 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 KLHDC10Q6PID8 442 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 CYP26C1Q6V0L0 522 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 SLC30A10Q6XR72 485 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 HEATR3Q7Z4Q2 680 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 VSIG10LQ86VR7 867 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 RAB11FIP4Q86YS3 637 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 ARRDC4Q8NCT1 418 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 HIPK4Q8NE63 616 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 SMARCC2Q8TAQ2 1214 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 SCFD2Q8WU76 684 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 TBC1D5Q92609 795 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 GTF3C6Q969F1 213 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 HDAC10Q969S8 669 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 UTP4Q969X6 686 aaKnown RBP6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 ERP27Q96DN0 273 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 UBXN10Q96LJ8 280 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 TAAR1Q96RJ0 339 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 UBL7Q96S82 380 aaPredicted RBP6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 PDCD2LQ9BRP1 358 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 LLPHQ9BRT6 129 aaKnown RBP6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 KATNBL1Q9H079 304 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 KCNH6Q9H252 994 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 C11orf49Q9H6J7 331 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 RC3H2Q9HBD1 1191 aaKnown RBP6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 C6orf50Q9HD87 102 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 PNPLA8Q9NP80 782 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 RIC8AQ9NPQ8 531 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 PXMP2Q9NR77 195 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 ERVK13-1Q9NX77 482 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 DUSP13Q9UII6 198 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 CRYL1Q9Y2S2 319 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 RWDD3Q9Y3V2 267 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 NUMBLQ9Y6R0 609 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 ASTN1O14525 1302 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 FRMPD4Q14CM0 1322 aa6.14□□□□□ -1.43
NHLRC3-205ENST00000485407 KMT2BQ9UMN6 2715 aaPredicted RBP6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 TMEM82A0PJX8 343 aa6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 SMCO2A6NFE2 343 aa6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 FAM90A27PA6NNH2 459 aa6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 H3BS24 57 aa6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 DNM1LO00429 736 aa6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 FFAR2O15552 330 aa6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 MAFKO60675 156 aa6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 C4BPAP04003 597 aaKnown RBP6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 MMEP08473 750 aa6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 DHRS4L1P0CG22 281 aa6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 CST5P28325 142 aaPredicted RBP6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 CCND2P30279 289 aa6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 CCND3P30281 292 aaPredicted RBP6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 ADCY7P51828 1080 aa6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 RAB1AP62820 205 aa6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 HMGN5P82970 282 aaKnown RBP6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 MALLQ13021 153 aa6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 PMS2P11Q13670 270 aa6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 FGL2Q14314 439 aa6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 DUSP28Q4G0W2 176 aa6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 STEAP3Q658P3 488 aa6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 FAAH2Q6GMR7 532 aa6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 TAPT1Q6NXT6 567 aa6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 PCSK9Q8NBP7 692 aaKnown RBP6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 TMEM52Q8NDY8 209 aa6.13□□□□□ -1.43
NHLRC3-205ENST00000485407 TRPV1Q8NER1 839 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms