RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 SPPL3Q8TCT6 385 aa21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 UBE2Q2Q8WVN8 375 aa21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 TCF25Q9BQ70 676 aa21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 TLR10Q9BXR5 811 aa21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 ENTPD7Q9NQZ7 604 aa21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 ASNSD1Q9NWL6 643 aa21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 HSFX1Q9UBD0 423 aa21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 SLC27A5Q9Y2P5 690 aa21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 HYOU1Q9Y4L1 999 aa21.47■■□□□ 1.03
VCPKMT-203ENST00000484763 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.46■■□□□ 1.03
VCPKMT-203ENST00000484763 TEX28O15482 410 aa21.46■■□□□ 1.03
VCPKMT-203ENST00000484763 SPOPO43791 374 aa21.46■■□□□ 1.03
VCPKMT-203ENST00000484763 HSF2BPO75031 334 aa21.46■■□□□ 1.03
VCPKMT-203ENST00000484763 ATF2P15336 505 aa21.46■■□□□ 1.03
VCPKMT-203ENST00000484763 GPR15P49685 360 aa21.46■■□□□ 1.03
VCPKMT-203ENST00000484763 RPL10AP62906 217 aaKnown RBP21.46■■□□□ 1.03
VCPKMT-203ENST00000484763 TAF5Q15542 800 aa21.46■■□□□ 1.03
VCPKMT-203ENST00000484763 PAPD7Q5XG87 772 aaKnown RBP21.46■■□□□ 1.03
VCPKMT-203ENST00000484763 NIPA2Q8N8Q9 360 aa21.46■■□□□ 1.03
VCPKMT-203ENST00000484763 POF1BQ8WVV4 589 aa21.46■■□□□ 1.03
VCPKMT-203ENST00000484763 KHSRPQ92945 711 aaKnown RBP eCLIP21.46■■□□□ 1.031e-6■■□□□ 11.9
VCPKMT-203ENST00000484763 TLR9Q9NR96 1032 aa21.46■■□□□ 1.03
VCPKMT-203ENST00000484763 PACSIN2Q9UNF0 486 aaPredicted RBP21.46■■□□□ 1.03
VCPKMT-203ENST00000484763 IRAK3Q9Y616 596 aa21.46■■□□□ 1.03
VCPKMT-203ENST00000484763 USP3Q9Y6I4 520 aa21.46■■□□□ 1.03
VCPKMT-203ENST00000484763 C2CD4BA6NLJ0 364 aa21.45■■□□□ 1.03
VCPKMT-203ENST00000484763 CXCL14O95715 111 aa21.45■■□□□ 1.03
VCPKMT-203ENST00000484763 GLI1P08151 1106 aa21.45■■□□□ 1.03
VCPKMT-203ENST00000484763 USP17L7P0C7H9 530 aa21.45■■□□□ 1.03
VCPKMT-203ENST00000484763 GPD1P21695 349 aa21.45■■□□□ 1.03
VCPKMT-203ENST00000484763 PSMA2P25787 234 aa21.45■■□□□ 1.03
VCPKMT-203ENST00000484763 FLT3P36888 993 aa21.45■■□□□ 1.03
VCPKMT-203ENST00000484763 RAB30Q15771 203 aa21.45■■□□□ 1.03
VCPKMT-203ENST00000484763 NUP93Q8N1F7 819 aa21.45■■□□□ 1.03
VCPKMT-203ENST00000484763 IRGQQ8WZA9 623 aa21.45■■□□□ 1.03
VCPKMT-203ENST00000484763 FAM149B1Q96BN6 582 aa21.45■■□□□ 1.03
VCPKMT-203ENST00000484763 SPATA17Q96L03 361 aa21.45■■□□□ 1.03
VCPKMT-203ENST00000484763 PBX4Q9BYU1 374 aa21.45■■□□□ 1.03
VCPKMT-203ENST00000484763 PDGFRAP16234 1089 aa21.45■■□□□ 1.02
VCPKMT-203ENST00000484763 BMP8BP34820 402 aa21.45■■□□□ 1.02
VCPKMT-203ENST00000484763 PBX2P40425 430 aa21.45■■□□□ 1.02
VCPKMT-203ENST00000484763 TUFMP49411 452 aaKnown RBP21.45■■□□□ 1.02
VCPKMT-203ENST00000484763 ZNF143P52747 638 aaPredicted RBP21.45■■□□□ 1.02
VCPKMT-203ENST00000484763 ERVFC1P60507 584 aa21.45■■□□□ 1.02
VCPKMT-203ENST00000484763 ERVK-21P61565 698 aa21.45■■□□□ 1.02
VCPKMT-203ENST00000484763 SMC1AQ14683 1233 aaKnown RBP21.45■■□□□ 1.02
VCPKMT-203ENST00000484763 RPS6KA1Q15418 735 aa21.45■■□□□ 1.02
VCPKMT-203ENST00000484763 SDHAF4Q5VUM1 108 aa21.45■■□□□ 1.02
VCPKMT-203ENST00000484763 PM20D1Q6GTS8 502 aa21.45■■□□□ 1.02
VCPKMT-203ENST00000484763 SCAMP5Q8TAC9 235 aa21.45■■□□□ 1.02
VCPKMT-203ENST00000484763 RXFP2Q8WXD0 754 aa21.45■■□□□ 1.02
VCPKMT-203ENST00000484763 HES6Q96HZ4 224 aa21.45■■□□□ 1.02
VCPKMT-203ENST00000484763 MAFFQ9ULX9 164 aa21.45■■□□□ 1.02
VCPKMT-203ENST00000484763 PLXNA3P51805 1871 aa21.44■■□□□ 1.02
VCPKMT-203ENST00000484763 MIF4GDA9UHW6 222 aaKnown RBP21.44■■□□□ 1.02
VCPKMT-203ENST00000484763 DAB1O75553 588 aa21.44■■□□□ 1.02
VCPKMT-203ENST00000484763 SOAT2O75908 522 aa21.44■■□□□ 1.02
VCPKMT-203ENST00000484763 URI1O94763 535 aaPredicted RBP21.44■■□□□ 1.02
VCPKMT-203ENST00000484763 CNPP09543 421 aaKnown RBP21.44■■□□□ 1.02
VCPKMT-203ENST00000484763 YWHAZP63104 245 aaKnown RBP21.44■■□□□ 1.02
VCPKMT-203ENST00000484763 AMPD2Q01433 879 aa21.44■■□□□ 1.02
VCPKMT-203ENST00000484763 DENND5BQ6ZUT9 1274 aa21.44■■□□□ 1.02
VCPKMT-203ENST00000484763 NDRG1Q92597 394 aaKnown RBP21.44■■□□□ 1.02
VCPKMT-203ENST00000484763 CEP295NLQ96MC4 621 aa21.44■■□□□ 1.02
VCPKMT-203ENST00000484763 FBXO44Q9H4M3 255 aa21.44■■□□□ 1.02
VCPKMT-203ENST00000484763 MSRAQ9UJ68 235 aa21.44■■□□□ 1.02
VCPKMT-203ENST00000484763 SNX12Q9UMY4 172 aa21.44■■□□□ 1.02
VCPKMT-203ENST00000484763 RANBP2P49792 3224 aaKnown RBP21.44■■□□□ 1.02
VCPKMT-203ENST00000484763 GREB1Q4ZG55 1949 aa21.44■■□□□ 1.02
VCPKMT-203ENST00000484763 DPYSL4O14531 572 aa21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 ADH1AP07327 375 aa21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 DESP17661 470 aa21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 DNAJB1P25685 340 aa21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 SDC4P31431 198 aa21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 IFRD2Q12894 506 aaPredicted RBP21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 ACAP1Q15027 740 aa21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 PLPP4Q5VZY2 271 aa21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 TRNP1Q6NT89 227 aa21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 CPNE8Q86YQ8 564 aa21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 CD101Q93033 1021 aa21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 CNPY3Q9BT09 278 aa21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 EMILIN2Q9BXX0 1053 aa21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 CYP4F11Q9HBI6 524 aa21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 POPDC2Q9HBU9 364 aa21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 NGRNQ9NPE2 291 aaKnown RBP21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 SAR1BQ9Y6B6 198 aa21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 YJEFN3A6XGL0 299 aa21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 E7ENQ6 273 aa21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 RTN3O95197 1032 aaPredicted RBP21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 SEC24AO95486 1093 aa21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 ATF6P18850 670 aa21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 DNA2P51530 1060 aa21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 BHLHA9Q7RTU4 235 aa21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 GOLGA1Q92805 767 aa21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 USTQ9Y2C2 406 aa21.43■■□□□ 1.02
VCPKMT-203ENST00000484763 GRM6O15303 877 aa21.42■■□□□ 1.02
VCPKMT-203ENST00000484763 LPXNO60711 386 aa21.42■■□□□ 1.02
VCPKMT-203ENST00000484763 LTFP02788 710 aa21.42■■□□□ 1.02
VCPKMT-203ENST00000484763 PRLRP16471 622 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms