RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 ARL14EPQ8N8R7 260 aaPredicted RBP28.12■■■□□ 2.09
SMDT1-203ENST00000484235 IRF7Q92985 503 aa28.12■■■□□ 2.09
SMDT1-203ENST00000484235 BRD9Q9H8M2 597 aa28.12■■■□□ 2.09
SMDT1-203ENST00000484235 KIF9Q9HAQ2 790 aa28.12■■■□□ 2.09
SMDT1-203ENST00000484235 KMT2EQ8IZD2 1858 aa28.11■■■□□ 2.09
SMDT1-203ENST00000484235 ZNF263O14978 683 aa28.11■■■□□ 2.09
SMDT1-203ENST00000484235 ZDHHC11BP0C7U3 371 aa28.11■■■□□ 2.09
SMDT1-203ENST00000484235 GDI1P31150 447 aa28.11■■■□□ 2.09
SMDT1-203ENST00000484235 BST2Q10589 180 aaKnown RBP28.11■■■□□ 2.09
SMDT1-203ENST00000484235 ZSCAN23Q3MJ62 389 aa28.11■■■□□ 2.09
SMDT1-203ENST00000484235 KLHDC7AQ5VTJ3 777 aa28.11■■■□□ 2.09
SMDT1-203ENST00000484235 PIGZQ86VD9 579 aa28.11■■■□□ 2.09
SMDT1-203ENST00000484235 BPIFB1Q8TDL5 484 aa28.11■■■□□ 2.09
SMDT1-203ENST00000484235 SHC3Q92529 594 aa28.11■■■□□ 2.09
SMDT1-203ENST00000484235 ZSWIM1Q9BR11 485 aa28.11■■■□□ 2.09
SMDT1-203ENST00000484235 THG1LQ9NWX6 298 aaKnown RBP28.11■■■□□ 2.09
SMDT1-203ENST00000484235 GMIPQ9P107 970 aa28.11■■■□□ 2.09
SMDT1-203ENST00000484235 CCL26Q9Y258 94 aa28.11■■■□□ 2.09
SMDT1-203ENST00000484235 USP3Q9Y6I4 520 aa28.11■■■□□ 2.09
SMDT1-203ENST00000484235 XPO1O14980 1071 aaKnown RBP28.1■■■□□ 2.09
SMDT1-203ENST00000484235 OAS1P00973 400 aaKnown RBP28.1■■■□□ 2.09
SMDT1-203ENST00000484235 SETSIPP0DME0 302 aa28.1■■■□□ 2.09
SMDT1-203ENST00000484235 BRD2P25440 801 aaKnown RBP28.1■■■□□ 2.09
SMDT1-203ENST00000484235 AVPR2P30518 371 aa28.1■■■□□ 2.09
SMDT1-203ENST00000484235 PDE4CQ08493 712 aa28.1■■■□□ 2.09
SMDT1-203ENST00000484235 PKDCCQ504Y2 493 aa28.1■■■□□ 2.09
SMDT1-203ENST00000484235 SIX5Q8N196 739 aa28.1■■■□□ 2.09
SMDT1-203ENST00000484235 UBA3Q8TBC4 463 aa28.1■■■□□ 2.09
SMDT1-203ENST00000484235 TRPV5Q9NQA5 729 aa28.1■■■□□ 2.09
SMDT1-203ENST00000484235 TLR8Q9NR97 1041 aaKnown RBP28.1■■■□□ 2.09
SMDT1-203ENST00000484235 WDR3Q9UNX4 943 aaKnown RBP eCLIP28.1■■■□□ 2.09
SMDT1-203ENST00000484235 CHADO15335 359 aa28.09■■■□□ 2.09
SMDT1-203ENST00000484235 CAVIN2O95810 425 aa28.09■■■□□ 2.09
SMDT1-203ENST00000484235 USP8P40818 1118 aa28.09■■■□□ 2.09
SMDT1-203ENST00000484235 TUBP50607 506 aa28.09■■■□□ 2.09
SMDT1-203ENST00000484235 ARHGAP29Q52LW3 1261 aa28.09■■■□□ 2.09
SMDT1-203ENST00000484235 SLC44A4Q53GD3 710 aa28.09■■■□□ 2.09
SMDT1-203ENST00000484235 RAB41Q5JT25 222 aa28.09■■■□□ 2.09
SMDT1-203ENST00000484235 HECTD3Q5T447 861 aa28.09■■■□□ 2.09
SMDT1-203ENST00000484235 DNASE1L2Q92874 299 aa28.09■■■□□ 2.09
SMDT1-203ENST00000484235 RNF38Q9H0F5 515 aa28.09■■■□□ 2.09
SMDT1-203ENST00000484235 PLCB1Q9NQ66 1216 aa28.09■■■□□ 2.09
SMDT1-203ENST00000484235 CA14Q9ULX7 337 aa28.09■■■□□ 2.09
SMDT1-203ENST00000484235 ARHGAP26Q9UNA1 814 aa28.09■■■□□ 2.09
SMDT1-203ENST00000484235 KRBA1A5PL33 1030 aa28.08■■■□□ 2.09
SMDT1-203ENST00000484235 BECN2A8MW95 431 aa28.08■■■□□ 2.09
SMDT1-203ENST00000484235 OLFM2O95897 454 aa28.08■■■□□ 2.09
SMDT1-203ENST00000484235 PDGFBP01127 241 aaPredicted RBP28.08■■■□□ 2.09
SMDT1-203ENST00000484235 CALCAP01258 141 aa28.08■■■□□ 2.09
SMDT1-203ENST00000484235 RFX1P22670 979 aa28.08■■■□□ 2.09
SMDT1-203ENST00000484235 SLC7A9P82251 487 aa28.08■■■□□ 2.09
SMDT1-203ENST00000484235 APTXQ7Z2E3 356 aaKnown RBP28.08■■■□□ 2.09
SMDT1-203ENST00000484235 CCDC186Q7Z3E2 898 aa28.08■■■□□ 2.09
SMDT1-203ENST00000484235 LSM14BQ9BX40 385 aaKnown RBP28.08■■■□□ 2.09
SMDT1-203ENST00000484235 ARHGEF3Q9NR81 526 aa28.08■■■□□ 2.09
SMDT1-203ENST00000484235 LGALS16A8MUM7 142 aa28.07■■■□□ 2.08
SMDT1-203ENST00000484235 FOXN3O00409 490 aaPredicted RBP28.07■■■□□ 2.08
SMDT1-203ENST00000484235 CYP26A1O43174 497 aa28.07■■■□□ 2.08
SMDT1-203ENST00000484235 MED7O43513 233 aa28.07■■■□□ 2.08
SMDT1-203ENST00000484235 ATP1A3P13637 1013 aa28.07■■■□□ 2.08
SMDT1-203ENST00000484235 UCHL3P15374 230 aa28.07■■■□□ 2.08
SMDT1-203ENST00000484235 PLA2G4AP47712 749 aa28.07■■■□□ 2.08
SMDT1-203ENST00000484235 PLCB2Q00722 1185 aa28.07■■■□□ 2.08
SMDT1-203ENST00000484235 IQCB1Q15051 598 aa28.07■■■□□ 2.08
SMDT1-203ENST00000484235 SLC35F5Q8WV83 523 aa28.07■■■□□ 2.08
SMDT1-203ENST00000484235 ZNF606Q8WXB4 792 aa28.07■■■□□ 2.08
SMDT1-203ENST00000484235 KCTD13Q8WZ19 329 aa28.07■■■□□ 2.08
SMDT1-203ENST00000484235 SHDQ96IW2 340 aa28.07■■■□□ 2.08
SMDT1-203ENST00000484235 MFSD1Q9H3U5 465 aa28.07■■■□□ 2.08
SMDT1-203ENST00000484235 AJAP1Q9UKB5 411 aaPredicted RBP28.07■■■□□ 2.08
SMDT1-203ENST00000484235 DENND4CQ5VZ89 1909 aa28.07■■■□□ 2.08
SMDT1-203ENST00000484235 TULP2O00295 520 aa28.06■■■□□ 2.08
SMDT1-203ENST00000484235 TCF3P15923 654 aa28.06■■■□□ 2.08
SMDT1-203ENST00000484235 GNA15P30679 374 aa28.06■■■□□ 2.08
SMDT1-203ENST00000484235 PGFP49763 221 aa28.06■■■□□ 2.08
SMDT1-203ENST00000484235 PSEN1P49768 467 aa28.06■■■□□ 2.08
SMDT1-203ENST00000484235 TKTL1P51854 596 aa28.06■■■□□ 2.08
SMDT1-203ENST00000484235 NFKBIBQ15653 356 aa28.06■■■□□ 2.08
SMDT1-203ENST00000484235 NAA15Q9BXJ9 866 aaKnown RBP28.06■■■□□ 2.08
SMDT1-203ENST00000484235 LRRC4Q9HBW1 653 aa28.06■■■□□ 2.08
SMDT1-203ENST00000484235 M0QYV0 167 aa28.05■■■□□ 2.08
SMDT1-203ENST00000484235 ARNTLO00327 626 aa28.05■■■□□ 2.08
SMDT1-203ENST00000484235 COCHO43405 550 aa28.05■■■□□ 2.08
SMDT1-203ENST00000484235 UBXN1Q04323 297 aa28.05■■■□□ 2.08
SMDT1-203ENST00000484235 PRKCQQ04759 706 aa28.05■■■□□ 2.08
SMDT1-203ENST00000484235 PTK2Q05397 1052 aa28.05■■■□□ 2.08
SMDT1-203ENST00000484235 DRAP1Q14919 205 aaPredicted RBP28.05■■■□□ 2.08
SMDT1-203ENST00000484235 MEA1Q16626 185 aa28.05■■■□□ 2.08
SMDT1-203ENST00000484235 CC2D1AQ6P1N0 951 aaPredicted RBP28.05■■■□□ 2.08
SMDT1-203ENST00000484235 USP34Q70CQ2 3546 aa28.05■■■□□ 2.08
SMDT1-203ENST00000484235 FAM71AQ8IYT1 594 aa28.05■■■□□ 2.08
SMDT1-203ENST00000484235 SH3RF2Q8TEC5 729 aa28.05■■■□□ 2.08
SMDT1-203ENST00000484235 STK33Q9BYT3 514 aa28.05■■■□□ 2.08
SMDT1-203ENST00000484235 CCSER2Q9H7U1 834 aa28.05■■■□□ 2.08
SMDT1-203ENST00000484235 FHOD1Q9Y613 1164 aa28.05■■■□□ 2.08
SMDT1-203ENST00000484235 ZNF638Q14966 1978 aaKnown RBP28.04■■■□□ 2.08
SMDT1-203ENST00000484235 OBSL1O75147 1896 aa28.04■■■□□ 2.08
SMDT1-203ENST00000484235 NUP210Q8TEM1 1887 aaPredicted RBP28.04■■■□□ 2.08
SMDT1-203ENST00000484235 THAP12O43422 761 aa28.04■■■□□ 2.08
SMDT1-203ENST00000484235 ZBED1O96006 694 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms