RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 MTMR12Q9C0I1 747 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 S1PR5Q9H228 398 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 ADAM7Q9H2U9 754 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 SFXN1Q9H9B4 322 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 GDAP2Q9NXN4 497 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 FBXL5Q9UKA1 691 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 TIMM13Q9Y5L4 95 aaPredicted RBP9.56□□□□□ -0.88
COL8A1-207ENST00000483969 CDY1Q9Y6F8 540 aa9.56□□□□□ -0.88
COL8A1-207ENST00000483969 CHD9Q3L8U1 2897 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 LRRIQ3A6PVS8 624 aaPredicted RBP9.55□□□□□ -0.88
COL8A1-207ENST00000483969 TBC1D4O60343 1298 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 CST3P01034 146 aaPredicted RBP9.55□□□□□ -0.88
COL8A1-207ENST00000483969 C4BPAP04003 597 aaKnown RBP9.55□□□□□ -0.88
COL8A1-207ENST00000483969 SPATA31D3P0C874 917 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 NPR3P17342 541 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 GTF2H1P32780 548 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 MTHFRP42898 656 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 LHX1P48742 406 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 KCNQ1P51787 676 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 RBM10P98175 930 aaKnown RBP9.55□□□□□ -0.88
COL8A1-207ENST00000483969 BIRC3Q13489 604 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 SMAD2Q15796 467 aaKnown RBP9.55□□□□□ -0.88
COL8A1-207ENST00000483969 SGSM1Q2NKQ1 1148 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 RARS2Q5T160 578 aaKnown RBP9.55□□□□□ -0.88
COL8A1-207ENST00000483969 LIN9Q5TKA1 542 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 KLHL10Q6JEL2 608 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 SPATA31D4Q6ZUB0 917 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 CCDC149Q6ZUS6 474 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 C12orf50Q8NA57 414 aaPredicted RBP9.55□□□□□ -0.88
COL8A1-207ENST00000483969 SMRP1Q8NCR6 262 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 CMASQ8NFW8 434 aaPredicted RBP9.55□□□□□ -0.88
COL8A1-207ENST00000483969 CXorf38Q8TB03 319 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 SPATA18Q8TC71 538 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 NELFBQ8WX92 580 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 SYAP1Q96A49 352 aaPredicted RBP9.55□□□□□ -0.88
COL8A1-207ENST00000483969 NECTIN4Q96NY8 510 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 METTL14Q9HCE5 456 aaKnown RBP9.55□□□□□ -0.88
COL8A1-207ENST00000483969 MAN1C1Q9NR34 630 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 ZDHHC7Q9NXF8 308 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 PRKAG3Q9UGI9 489 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 SIX4Q9UIU6 781 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 RNF114Q9Y508 228 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 SNX9Q9Y5X1 595 aa9.55□□□□□ -0.88
COL8A1-207ENST00000483969 FNDC1Q4ZHG4 1894 aaPredicted RBP9.54□□□□□ -0.88
COL8A1-207ENST00000483969 CCDC195A0A1B0GUA6 201 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 SLC16A3O15427 465 aaKnown RBP9.54□□□□□ -0.88
COL8A1-207ENST00000483969 ADAM12O43184 909 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 ABLIM3O94929 683 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 GNA14O95837 355 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 HNRNPA1P09651 372 aaKnown RBP eCLIP9.54□□□□□ -0.88
COL8A1-207ENST00000483969 P4HA1P13674 534 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 ATF2P15336 505 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 PTMSP20962 102 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 BMP6P22004 513 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 MYL7Q01449 175 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 ROR1Q01973 937 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 SMARCB1Q12824 385 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 PAK1Q13153 545 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 GPR17Q13304 367 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 CT47A1Q5JQC4 288 aaPredicted RBP9.54□□□□□ -0.88
COL8A1-207ENST00000483969 PPM1LQ5SGD2 360 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 WSCD1Q658N2 575 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 RSPO2Q6UXX9 243 aaPredicted RBP9.54□□□□□ -0.88
COL8A1-207ENST00000483969 TMC5Q6UXY8 1006 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 C15orf39Q6ZRI6 1047 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 GPR149Q86SP6 731 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 ZC3H3Q8IXZ2 948 aaKnown RBP9.54□□□□□ -0.88
COL8A1-207ENST00000483969 DCP1BQ8IZD4 617 aaKnown RBP9.54□□□□□ -0.88
COL8A1-207ENST00000483969 TOP6BLQ8N6T0 577 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 C12orf76Q8N812 135 aaPredicted RBP9.54□□□□□ -0.88
COL8A1-207ENST00000483969 CCDC150Q8NCX0 1101 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 PLEKHO2Q8TD55 490 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 TAF4BQ92750 862 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 MMS19Q96T76 1030 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 YIPF2Q9BWQ6 316 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 APOL5Q9BWW9 433 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 OSBPL1AQ9BXW6 950 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 RHOBTB2Q9BYZ6 727 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 PIDD1Q9HB75 910 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 ARMCX3Q9UH62 379 aaPredicted RBP9.54□□□□□ -0.88
COL8A1-207ENST00000483969 AFF4Q9UHB7 1163 aaKnown RBP9.54□□□□□ -0.88
COL8A1-207ENST00000483969 FBXW11Q9UKB1 542 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 USP15Q9Y4E8 981 aaPredicted RBP9.54□□□□□ -0.88
COL8A1-207ENST00000483969 MYH15Q9Y2K3 1946 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 PTPRJQ12913 1337 aa9.54□□□□□ -0.88
COL8A1-207ENST00000483969 TRIM49BA6NDI0 452 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 PRRG1O14668 218 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 CLSTN1O94985 981 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 C8AP07357 584 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 ESRRAP11474 423 aaPredicted RBP9.53□□□□□ -0.88
COL8A1-207ENST00000483969 IL9P15248 144 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 HOXA9P31269 272 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 PMS1P54277 932 aaKnown RBP9.53□□□□□ -0.88
COL8A1-207ENST00000483969 MYL6P60660 151 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 TNNC1P63316 161 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 DLG4P78352 724 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 TSPY1Q01534 308 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 CBX2Q14781 532 aaPredicted RBP9.53□□□□□ -0.88
COL8A1-207ENST00000483969 WDR72Q3MJ13 1102 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 ZACNQ401N2 412 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms