RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 CCR2P41597 374 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 ALDH1A3P47895 512 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 KPNA1P52294 538 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-207ENST00000483407 EPHB3P54753 998 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 EPHA5P54756 1037 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 MLLT6P55198 1093 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-207ENST00000483407 ST3GAL1Q11201 340 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 SETDB1Q15047 1291 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 TEAD2Q15562 447 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 ZRSR1Q15695 479 aaKnown RBP6.37□□□□□ -1.39
CSDE1-207ENST00000483407 KYAT1Q16773 422 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 LAIR1Q6GTX8 287 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 RINT1Q6NUQ1 792 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 ZPBP2Q6X784 338 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 PRR23BQ6ZRT6 265 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 C1orf186Q6ZWK4 172 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 HAUS6Q7Z4H7 955 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 MFSD6LQ8IWD5 586 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 DAW1Q8N136 415 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 FAM169BQ8N8A8 192 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 IGSF22Q8N9C0 903 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 BICD1Q96G01 975 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 ZBTB45Q96K62 511 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-207ENST00000483407 ZSCAN31Q96LW9 406 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-207ENST00000483407 ZSWIM3Q96MP5 696 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 NTPCRQ9BSD7 190 aaKnown RBP6.37□□□□□ -1.39
CSDE1-207ENST00000483407 RUSC1Q9BVN2 902 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 CCDC86Q9H6F5 360 aaKnown RBP6.37□□□□□ -1.39
CSDE1-207ENST00000483407 C8orf33Q9H7E9 229 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-207ENST00000483407 TRPV4Q9HBA0 871 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 CEP72Q9P209 647 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 TUBGCP4Q9UGJ1 667 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 UBQLN1Q9UMX0 589 aaKnown RBP6.37□□□□□ -1.39
CSDE1-207ENST00000483407 YIPF1Q9Y548 306 aa6.37□□□□□ -1.39
CSDE1-207ENST00000483407 ANKRD11Q6UB99 2663 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-207ENST00000483407 MTCL1Q9Y4B5 1905 aaKnown RBP6.37□□□□□ -1.39
CSDE1-207ENST00000483407 GPR179Q6PRD1 2367 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 OTOGLQ3ZCN5 2332 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 SHISA7A6NL88 538 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 PP2D1A8MPX8 630 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 K7ELQ4 463 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-207ENST00000483407 M0QZQ0 153 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 ABLIM1O14639 778 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 SMAD7O15105 426 aaKnown RBP6.36□□□□□ -1.39
CSDE1-207ENST00000483407 CHADO15335 359 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 FOXD2O60548 495 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-207ENST00000483407 MOSPD3O75425 235 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 OAZ2O95190 189 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 FGF19O95750 216 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 CTSBP07858 339 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 CLTAP09496 248 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 CXCL8P10145 99 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 CHRNB1P11230 501 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 TDGF1P13385 188 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 PLS3P13797 630 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 GJA1P17302 382 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 CYP3A5P20815 502 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 PAX3P23760 479 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 CCNE1P24864 410 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 U2AF2P26368 475 aaKnown RBP eCLIP6.36□□□□□ -1.39
CSDE1-207ENST00000483407 LRPAP1P30533 357 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 MCL1Q07820 350 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 MAPK7Q13164 816 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 GPR17Q13304 367 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 SIM2Q14190 667 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-207ENST00000483407 LPAL2Q16609 132 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 SLC10A6Q3KNW5 377 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 ARHGAP15Q53QZ3 475 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 DGKKQ5KSL6 1271 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 ARMCX5Q6P1M9 558 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 DSTYKQ6XUX3 929 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-207ENST00000483407 ITIH5Q86UX2 942 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 SPEM1Q8N4L4 309 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 C4orf32Q8N8J7 132 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 GALNT11Q8NCW6 608 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 BEST2Q8NFU1 509 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 SHKBP1Q8TBC3 707 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 NETO1Q8TDF5 533 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 HNRNPLLQ8WVV9 542 aaKnown RBP6.36□□□□□ -1.39
CSDE1-207ENST00000483407 CDK5RAP3Q96JB5 506 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 PGLYRP2Q96PD5 576 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 TSPAN18Q96SJ8 248 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 TRIM55Q9BYV6 548 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 ATXN3LQ9H3M9 355 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 OBP2AQ9NY56 170 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 KCND2Q9NZV8 630 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 LARSQ9P2J5 1176 aaKnown RBP6.36□□□□□ -1.39
CSDE1-207ENST00000483407 TMA7Q9Y2S6 64 aaKnown RBP6.36□□□□□ -1.39
CSDE1-207ENST00000483407 KIF3AQ9Y496 699 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 ASB3Q9Y575 518 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 PCDHB6Q9Y5E3 794 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 PCDHB14Q9Y5E9 798 aa6.36□□□□□ -1.39
CSDE1-207ENST00000483407 CACNA1IQ9P0X4 2223 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 SETXQ7Z333 2677 aaKnown RBP6.35□□□□□ -1.39
CSDE1-207ENST00000483407 DNAH14Q0VDD8 3507 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-207ENST00000483407 TTC26A0AVF1 554 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 SLC38A8A6NNN8 435 aa6.35□□□□□ -1.39
CSDE1-207ENST00000483407 SPECC1L-ADORA2AF8WAN1 911 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms