RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 NKD2Q969F2 451 aaPredicted RBP14.68□□□□□ -0.06
VARS-225ENST00000482996 JAKMIP2Q96AA8 810 aa14.68□□□□□ -0.06
VARS-225ENST00000482996 TMEM176AQ96HP8 235 aa14.68□□□□□ -0.06
VARS-225ENST00000482996 PNPLA8Q9NP80 782 aa14.68□□□□□ -0.06
VARS-225ENST00000482996 GMIPQ9P107 970 aa14.68□□□□□ -0.06
VARS-225ENST00000482996 CHORDC1Q9UHD1 332 aaPredicted RBP14.68□□□□□ -0.06
VARS-225ENST00000482996 CPQQ9Y646 472 aa14.68□□□□□ -0.06
VARS-225ENST00000482996 WNT6Q9Y6F9 365 aa14.68□□□□□ -0.06
VARS-225ENST00000482996 MYH10P35580 1976 aa14.67□□□□□ -0.06
VARS-225ENST00000482996 SLC9A3R1O14745 358 aaPredicted RBP14.67□□□□□ -0.06
VARS-225ENST00000482996 PMM2O15305 246 aa14.67□□□□□ -0.06
VARS-225ENST00000482996 P4HA2O15460 535 aa14.67□□□□□ -0.06
VARS-225ENST00000482996 GFRA3O60609 400 aa14.67□□□□□ -0.06
VARS-225ENST00000482996 NFATC1O95644 943 aa14.67□□□□□ -0.06
VARS-225ENST00000482996 OLFM2O95897 454 aa14.67□□□□□ -0.06
VARS-225ENST00000482996 TUBP50607 506 aa14.67□□□□□ -0.06
VARS-225ENST00000482996 SLC8A3P57103 927 aa14.67□□□□□ -0.06
VARS-225ENST00000482996 CSTF1Q05048 431 aaKnown RBP14.67□□□□□ -0.06
VARS-225ENST00000482996 EML3Q32P44 896 aa14.67□□□□□ -0.06
VARS-225ENST00000482996 ZNF528Q3MIS6 628 aa14.67□□□□□ -0.06
VARS-225ENST00000482996 SNX30Q5VWJ9 437 aa14.67□□□□□ -0.06
VARS-225ENST00000482996 MAMSTRQ6ZN01 415 aa14.67□□□□□ -0.06
VARS-225ENST00000482996 SLC4A11Q8NBS3 891 aa14.67□□□□□ -0.06
VARS-225ENST00000482996 NT5C1BQ96P26 610 aa14.67□□□□□ -0.06
VARS-225ENST00000482996 ARID3AQ99856 593 aa14.67□□□□□ -0.06
VARS-225ENST00000482996 SRRTQ9BXP5 876 aaKnown RBP14.67□□□□□ -0.06
VARS-225ENST00000482996 DUSP16Q9BY84 665 aa14.67□□□□□ -0.06
VARS-225ENST00000482996 NACA2Q9H009 215 aa14.67□□□□□ -0.06
VARS-225ENST00000482996 RNF38Q9H0F5 515 aa14.67□□□□□ -0.06
VARS-225ENST00000482996 SEMA4AQ9H3S1 761 aa14.67□□□□□ -0.06
VARS-225ENST00000482996 ECT2Q9H8V3 914 aa14.67□□□□□ -0.06
VARS-225ENST00000482996 TLR8Q9NR97 1041 aaKnown RBP14.67□□□□□ -0.06
VARS-225ENST00000482996 SMPD4Q9NXE4 827 aa14.67□□□□□ -0.06
VARS-225ENST00000482996 KIF26AQ9ULI4 1882 aaPredicted RBP14.67□□□□□ -0.06
VARS-225ENST00000482996 VPS13AQ96RL7 3174 aa14.67□□□□□ -0.06
VARS-225ENST00000482996 WDR87Q6ZQQ6 2873 aa14.66□□□□□ -0.06
VARS-225ENST00000482996 FAM186AA6NE01 2351 aa14.66□□□□□ -0.06
VARS-225ENST00000482996 ZDHHC11BP0C7U3 371 aa14.66□□□□□ -0.06
VARS-225ENST00000482996 CCDC192P0DO97 292 aa14.66□□□□□ -0.06
VARS-225ENST00000482996 ACO1P21399 889 aaKnown RBP14.66□□□□□ -0.06
VARS-225ENST00000482996 CCR3P51677 355 aa14.66□□□□□ -0.06
VARS-225ENST00000482996 RAD23BP54727 409 aa14.66□□□□□ -0.06
VARS-225ENST00000482996 GRSF1Q12849 480 aaKnown RBP eCLIP14.66□□□□□ -0.06
VARS-225ENST00000482996 LRMPQ12912 555 aa14.66□□□□□ -0.06
VARS-225ENST00000482996 PPP1R26Q5T8A7 1209 aaPredicted RBP14.66□□□□□ -0.06
VARS-225ENST00000482996 ARHGAP17Q68EM7 881 aa14.66□□□□□ -0.06
VARS-225ENST00000482996 TRIM59Q8IWR1 403 aa14.66□□□□□ -0.06
VARS-225ENST00000482996 MAML2Q8IZL2 1156 aaPredicted RBP14.66□□□□□ -0.06
VARS-225ENST00000482996 SYNPOQ8N3V7 929 aa14.66□□□□□ -0.06
VARS-225ENST00000482996 MLKLQ8NB16 471 aa14.66□□□□□ -0.06
VARS-225ENST00000482996 CLSTN2Q9H4D0 955 aa14.66□□□□□ -0.06
VARS-225ENST00000482996 PRMT8Q9NR22 394 aaPredicted RBP14.66□□□□□ -0.06
VARS-225ENST00000482996 RBM12Q9NTZ6 932 aaKnown RBP14.66□□□□□ -0.06
VARS-225ENST00000482996 CFAP97Q9P2B7 532 aa14.66□□□□□ -0.06
VARS-225ENST00000482996 RWDD2AQ9UIY3 292 aa14.66□□□□□ -0.06
VARS-225ENST00000482996 SCML2Q9UQR0 700 aa14.66□□□□□ -0.06
VARS-225ENST00000482996 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.66□□□□□ -0.06
VARS-225ENST00000482996 R4GN57 208 aa14.66□□□□□ -0.06
VARS-225ENST00000482996 OTOL1A6NHN0 477 aaPredicted RBP14.65□□□□□ -0.06
VARS-225ENST00000482996 HHLA1C9JL84 531 aa14.65□□□□□ -0.06
VARS-225ENST00000482996 TRDMT1O14717 391 aaKnown RBP14.65□□□□□ -0.06
VARS-225ENST00000482996 COCHO43405 550 aa14.65□□□□□ -0.06
VARS-225ENST00000482996 TLR5O60602 858 aa14.65□□□□□ -0.06
VARS-225ENST00000482996 AFPP02771 609 aaKnown RBP14.65□□□□□ -0.06
VARS-225ENST00000482996 GJA4P35212 333 aa14.65□□□□□ -0.06
VARS-225ENST00000482996 MARSP56192 900 aaKnown RBP14.65□□□□□ -0.06
VARS-225ENST00000482996 KCNH2Q12809 1159 aa14.65□□□□□ -0.06
VARS-225ENST00000482996 SGO2Q562F6 1265 aa14.65□□□□□ -0.06
VARS-225ENST00000482996 CLEC17AQ6ZS10 378 aa14.65□□□□□ -0.06
VARS-225ENST00000482996 GPRIN1Q7Z2K8 1008 aa14.65□□□□□ -0.06
VARS-225ENST00000482996 SPEM1Q8N4L4 309 aa14.65□□□□□ -0.06
VARS-225ENST00000482996 FAM126AQ9BYI3 521 aaPredicted RBP14.65□□□□□ -0.06
VARS-225ENST00000482996 NUP62CLQ9H1M0 184 aa14.65□□□□□ -0.06
VARS-225ENST00000482996 LINC00597Q9H2U6 94 aa14.65□□□□□ -0.06
VARS-225ENST00000482996 CCSER2Q9H7U1 834 aa14.65□□□□□ -0.06
VARS-225ENST00000482996 KIAA1257Q9ULG3 409 aa14.65□□□□□ -0.06
VARS-225ENST00000482996 PRR23AA6NEV1 266 aa14.64□□□□□ -0.07
VARS-225ENST00000482996 CD19P15391 556 aa14.64□□□□□ -0.07
VARS-225ENST00000482996 DRD1P21728 446 aa14.64□□□□□ -0.07
VARS-225ENST00000482996 CXCL12P48061 93 aa14.64□□□□□ -0.07
VARS-225ENST00000482996 KIF11P52732 1056 aa14.64□□□□□ -0.07
VARS-225ENST00000482996 NRLP54845 237 aa14.64□□□□□ -0.07
VARS-225ENST00000482996 ZXDBP98169 803 aa14.64□□□□□ -0.07
VARS-225ENST00000482996 CCINQ13939 588 aa14.64□□□□□ -0.07
VARS-225ENST00000482996 TMEM196Q5HYL7 178 aa14.64□□□□□ -0.07
VARS-225ENST00000482996 PPM1KQ8N3J5 372 aa14.64□□□□□ -0.07
VARS-225ENST00000482996 ANKRD52Q8NB46 1076 aa14.64□□□□□ -0.07
VARS-225ENST00000482996 ATRIPQ8WXE1 791 aa14.64□□□□□ -0.07
VARS-225ENST00000482996 GBP4Q96PP9 640 aa14.64□□□□□ -0.07
VARS-225ENST00000482996 P2RY13Q9BPV8 354 aa14.64□□□□□ -0.07
VARS-225ENST00000482996 UBXN6Q9BZV1 441 aa14.64□□□□□ -0.07
VARS-225ENST00000482996 ZSCAN32Q9NX65 697 aa14.64□□□□□ -0.07
VARS-225ENST00000482996 TBC1D14Q9P2M4 693 aa14.64□□□□□ -0.07
VARS-225ENST00000482996 HESX1Q9UBX0 185 aa14.64□□□□□ -0.07
VARS-225ENST00000482996 SH3BP1Q9Y3L3 701 aa14.64□□□□□ -0.07
VARS-225ENST00000482996 PCDHGA2Q9Y5H1 932 aa14.64□□□□□ -0.07
VARS-225ENST00000482996 PATJQ8NI35 1801 aa14.64□□□□□ -0.07
VARS-225ENST00000482996 EP300Q09472 2414 aaPredicted RBP14.63□□□□□ -0.07
VARS-225ENST00000482996 HELZP42694 1942 aaKnown RBP14.63□□□□□ -0.07
VARS-225ENST00000482996 E2F8A0AVK6 867 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms