RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 GCNAQ96QF7 691 aa20.98■□□□□ 0.95
TRAPPC12-220ENST00000482645 SYT11Q9BT88 431 aa20.98■□□□□ 0.95
TRAPPC12-220ENST00000482645 THEGQ9P2T0 379 aa20.98■□□□□ 0.95
TRAPPC12-220ENST00000482645 UXTQ9UBK9 157 aaPredicted RBP20.98■□□□□ 0.95
TRAPPC12-220ENST00000482645 ZNF638Q14966 1978 aaKnown RBP20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 CLUHO75153 1309 aa20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 UNC80Q8N2C7 3258 aa20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 A0A1W2PRU2 124 aa20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 MBTPS2O43462 519 aa20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 PAPLNO95428 1278 aa20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 ABL1P00519 1130 aa20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 USP17L7P0C7H9 530 aa20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 SP100P23497 879 aaPredicted RBP20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 CCR2P41597 374 aa20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 TAF10Q12962 218 aa20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 LEXMQ3ZCV2 418 aa20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 CCDC170Q8IYT3 715 aa20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 OLIG1Q8TAK6 271 aa20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 SLITRK1Q96PX8 696 aa20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 PCDHB18PQ96TA0 734 aa20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 DESI2Q9BSY9 194 aa20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 LRRC3Q9BY71 257 aa20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 ULBP1Q9BZM6 244 aa20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 UBXN6Q9BZV1 441 aa20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 MIS12Q9H081 205 aa20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 ATXN3LQ9H3M9 355 aa20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 FBXO44Q9H4M3 255 aa20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 POMKQ9H5K3 350 aa20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 SYNCQ9H7C4 482 aa20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 WDR6Q9NNW5 1121 aaKnown RBP20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 MRPS23Q9Y3D9 190 aaKnown RBP20.97■□□□□ 0.95
TRAPPC12-220ENST00000482645 NOTCH4Q99466 2003 aa20.96■□□□□ 0.95
TRAPPC12-220ENST00000482645 NRG2O14511 850 aaPredicted RBP20.96■□□□□ 0.95
TRAPPC12-220ENST00000482645 LSM8O95777 96 aaKnown RBP20.96■□□□□ 0.95
TRAPPC12-220ENST00000482645 FSHRP23945 695 aa20.96■□□□□ 0.95
TRAPPC12-220ENST00000482645 NOMO3P69849 1222 aa20.96■□□□□ 0.95
TRAPPC12-220ENST00000482645 HS1BP3Q53T59 392 aa20.96■□□□□ 0.95
TRAPPC12-220ENST00000482645 PTCRAQ6ISU1 281 aaPredicted RBP20.96■□□□□ 0.95
TRAPPC12-220ENST00000482645 TOGARAM2Q6ZUX3 1019 aa20.96■□□□□ 0.95
TRAPPC12-220ENST00000482645 GAREM2Q75VX8 874 aa20.96■□□□□ 0.95
TRAPPC12-220ENST00000482645 ITFG1Q8TB96 612 aa20.96■□□□□ 0.95
TRAPPC12-220ENST00000482645 KCTD13Q8WZ19 329 aa20.96■□□□□ 0.95
TRAPPC12-220ENST00000482645 TRMT2BQ96GJ1 504 aaKnown RBP20.96■□□□□ 0.95
TRAPPC12-220ENST00000482645 PPP1R13BQ96KQ4 1090 aa20.96■□□□□ 0.95
TRAPPC12-220ENST00000482645 MYRFLQ96LU7 910 aa20.96■□□□□ 0.95
TRAPPC12-220ENST00000482645 CPXM1Q96SM3 734 aa20.96■□□□□ 0.95
TRAPPC12-220ENST00000482645 TTLL2Q9BWV7 592 aa20.96■□□□□ 0.95
TRAPPC12-220ENST00000482645 TJP2Q9UDY2 1190 aa20.96■□□□□ 0.95
TRAPPC12-220ENST00000482645 CHORDC1Q9UHD1 332 aaPredicted RBP20.96■□□□□ 0.95
TRAPPC12-220ENST00000482645 ADAMTS1Q9UHI8 967 aa20.96■□□□□ 0.95
TRAPPC12-220ENST00000482645 PYCARDQ9ULZ3 195 aa20.96■□□□□ 0.95
TRAPPC12-220ENST00000482645 A0A087X0T9 212 aa20.95■□□□□ 0.94
TRAPPC12-220ENST00000482645 TMCO5BA8MYB1 307 aa20.95■□□□□ 0.94
TRAPPC12-220ENST00000482645 E5RJQ4 531 aa20.95■□□□□ 0.94
TRAPPC12-220ENST00000482645 NDUFA10O95299 355 aa20.95■□□□□ 0.94
TRAPPC12-220ENST00000482645 FAM228BP0C875 321 aa20.95■□□□□ 0.94
TRAPPC12-220ENST00000482645 CYP4F8P98187 520 aa20.95■□□□□ 0.94
TRAPPC12-220ENST00000482645 ASTE1Q2TB18 679 aaPredicted RBP20.95■□□□□ 0.94
TRAPPC12-220ENST00000482645 RAB41Q5JT25 222 aa20.95■□□□□ 0.94
TRAPPC12-220ENST00000482645 TRIM72Q6ZMU5 477 aa20.95■□□□□ 0.94
TRAPPC12-220ENST00000482645 LEMD2Q8NC56 503 aa20.95■□□□□ 0.94
TRAPPC12-220ENST00000482645 ACRBPQ8NEB7 543 aa20.95■□□□□ 0.94
TRAPPC12-220ENST00000482645 SLC30A5Q8TAD4 765 aa20.95■□□□□ 0.94
TRAPPC12-220ENST00000482645 SUSD6Q92537 303 aa20.95■□□□□ 0.94
TRAPPC12-220ENST00000482645 NDRG1Q92597 394 aaKnown RBP20.95■□□□□ 0.94
TRAPPC12-220ENST00000482645 HSFY1Q96LI6 401 aa20.95■□□□□ 0.94
TRAPPC12-220ENST00000482645 NECTIN4Q96NY8 510 aa20.95■□□□□ 0.94
TRAPPC12-220ENST00000482645 IL21Q9HBE4 155 aa20.95■□□□□ 0.94
TRAPPC12-220ENST00000482645 GMIPQ9P107 970 aa20.95■□□□□ 0.94
TRAPPC12-220ENST00000482645 DDX3XO00571 662 aaKnown RBP eCLIP20.94■□□□□ 0.942e-6■■□□□ 11.9
TRAPPC12-220ENST00000482645 ZNF197O14709 1029 aa20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 GABBR2O75899 941 aa20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 IPO7O95373 1038 aaKnown RBP20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 CYP1A1P04798 512 aaPredicted RBP20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 CDC25CP30307 473 aa20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 ACADSBP45954 432 aa20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 EPHA5P54756 1037 aa20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 TEAD2Q15562 447 aa20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 SLC18A3Q16572 532 aa20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 CLEC16AQ2KHT3 1053 aa20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 PTPN20Q4JDL3 420 aa20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 C2CD6Q53TS8 623 aa20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 SHKBP1Q8TBC3 707 aa20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 IPO4Q8TEX9 1081 aaKnown RBP20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 CLEC4CQ8WTT0 213 aa20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 STK32AQ8WU08 396 aa20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 SLITRK6Q9H5Y7 841 aa20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 SCML2Q9UQR0 700 aa20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 TADA3O75528 432 aa20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 FGF19O95750 216 aa20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 ZBED1O96006 694 aa20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 F11P03951 625 aa20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 CEBPBP17676 345 aa20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 CDH5P33151 784 aaPredicted RBP20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 NSFP46459 744 aaKnown RBP20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 KCNQ1P51787 676 aa20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 PRSS36Q5K4E3 855 aa20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 STXBP5Q5T5C0 1151 aa20.94■□□□□ 0.94
TRAPPC12-220ENST00000482645 TMEM150AQ86TG1 271 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms