RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 IPO4Q8TEX9 1081 aaKnown RBP13.93□□□□□ -0.18
HDAC1-208ENST00000482310 NOX5Q96PH1 765 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 GCNAQ96QF7 691 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 C11orf70Q9BRQ4 267 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 S1PR5Q9H228 398 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 LHX5Q9H2C1 402 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 TRPC7Q9HCX4 862 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 SPTLC3Q9NUV7 552 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 ADAMTS1Q9UHI8 967 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 USP15Q9Y4E8 981 aaPredicted RBP13.93□□□□□ -0.18
HDAC1-208ENST00000482310 ASB3Q9Y575 518 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 GRXCR2A6NFK2 248 aa13.92□□□□□ -0.18
HDAC1-208ENST00000482310 GOLGA8SH3BPF8 625 aa13.92□□□□□ -0.18
HDAC1-208ENST00000482310 ATMINO43313 823 aaPredicted RBP13.92□□□□□ -0.18
HDAC1-208ENST00000482310 AKR1B10O60218 316 aa13.92□□□□□ -0.18
HDAC1-208ENST00000482310 CYP1A1P04798 512 aaPredicted RBP13.92□□□□□ -0.18
HDAC1-208ENST00000482310 CEBPBP17676 345 aa13.92□□□□□ -0.18
HDAC1-208ENST00000482310 COL9A1P20849 921 aa13.92□□□□□ -0.18
HDAC1-208ENST00000482310 HNRNPH3P31942 346 aaKnown RBP13.92□□□□□ -0.18
HDAC1-208ENST00000482310 PGFP49763 221 aa13.92□□□□□ -0.18
HDAC1-208ENST00000482310 KIF11P52732 1056 aa13.92□□□□□ -0.18
HDAC1-208ENST00000482310 ITIH3Q06033 890 aa13.92□□□□□ -0.18
HDAC1-208ENST00000482310 GFPT1Q06210 699 aaPredicted RBP13.92□□□□□ -0.18
HDAC1-208ENST00000482310 STXBP5Q5T5C0 1151 aa13.92□□□□□ -0.18
HDAC1-208ENST00000482310 OR6B2Q6IFH4 312 aa13.92□□□□□ -0.18
HDAC1-208ENST00000482310 TRIM72Q6ZMU5 477 aa13.92□□□□□ -0.18
HDAC1-208ENST00000482310 FAM183BPQ6ZVS7 135 aa13.92□□□□□ -0.18
HDAC1-208ENST00000482310 RTL10Q7L3V2 364 aa13.92□□□□□ -0.18
HDAC1-208ENST00000482310 ERICH1Q86X53 443 aa13.92□□□□□ -0.18
HDAC1-208ENST00000482310 SCUBE3Q8IX30 993 aa13.92□□□□□ -0.18
HDAC1-208ENST00000482310 SMRP1Q8NCR6 262 aa13.92□□□□□ -0.18
HDAC1-208ENST00000482310 TTC16Q8NEE8 873 aa13.92□□□□□ -0.18
HDAC1-208ENST00000482310 ST13P5Q8NFI4 369 aaPredicted RBP13.92□□□□□ -0.18
HDAC1-208ENST00000482310 CMASQ8NFW8 434 aaPredicted RBP13.92□□□□□ -0.18
HDAC1-208ENST00000482310 ITFG1Q8TB96 612 aa13.92□□□□□ -0.18
HDAC1-208ENST00000482310 NECAB3Q96P71 396 aaPredicted RBP13.92□□□□□ -0.18
HDAC1-208ENST00000482310 ASB2Q96Q27 587 aa13.92□□□□□ -0.18
HDAC1-208ENST00000482310 SYT11Q9BT88 431 aa13.92□□□□□ -0.18
HDAC1-208ENST00000482310 ADAM7Q9H2U9 754 aa13.92□□□□□ -0.18
HDAC1-208ENST00000482310 ATXN3LQ9H3M9 355 aa13.92□□□□□ -0.18
HDAC1-208ENST00000482310 POMKQ9H5K3 350 aa13.92□□□□□ -0.18
HDAC1-208ENST00000482310 SLITRK6Q9H5Y7 841 aa13.92□□□□□ -0.18
HDAC1-208ENST00000482310 NHEJ1Q9H9Q4 299 aaPredicted RBP13.92□□□□□ -0.18
HDAC1-208ENST00000482310 CHORDC1Q9UHD1 332 aaPredicted RBP13.92□□□□□ -0.18
HDAC1-208ENST00000482310 MRPS23Q9Y3D9 190 aaKnown RBP13.92□□□□□ -0.18
HDAC1-208ENST00000482310 BZW2Q9Y6E2 419 aaKnown RBP13.92□□□□□ -0.18
HDAC1-208ENST00000482310 KIF26AQ9ULI4 1882 aaPredicted RBP13.92□□□□□ -0.18
HDAC1-208ENST00000482310 CLUHO75153 1309 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 A0A087X0T9 212 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.91□□□□□ -0.18
HDAC1-208ENST00000482310 A0A1W2PQH9 124 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 SOWAHDA6NJG2 315 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 TADA3O75528 432 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 GRAP2O75791 330 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 LSM8O95777 96 aaKnown RBP13.91□□□□□ -0.18
HDAC1-208ENST00000482310 ZBED1O96006 694 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 FAM228BP0C875 321 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 UNGP13051 313 aaPredicted RBP13.91□□□□□ -0.18
HDAC1-208ENST00000482310 FSHRP23945 695 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 TEAD2Q15562 447 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 MEA1Q16626 185 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 RAB41Q5JT25 222 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 ATAT1Q5SQI0 421 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 GAREM2Q75VX8 874 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 MSANTD4Q8NCY6 345 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 SHKBP1Q8TBC3 707 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 KCTD13Q8WZ19 329 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 FAM149B1Q96BN6 582 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 PIWIL1Q96J94 861 aaKnown RBP13.91□□□□□ -0.18
HDAC1-208ENST00000482310 CCDC42Q96M95 316 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 RIPOR3Q96MK2 946 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 SLITRK1Q96PX8 696 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 PANX2Q96RD6 677 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 LRRC3Q9BY71 257 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 FBXO44Q9H4M3 255 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 IL21Q9HBE4 155 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 PNPLA8Q9NP80 782 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 UXTQ9UBK9 157 aaPredicted RBP13.91□□□□□ -0.18
HDAC1-208ENST00000482310 NAGPAQ9UK23 515 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 NUDT5Q9UKK9 219 aa13.91□□□□□ -0.18
HDAC1-208ENST00000482310 PAPSS1O43252 624 aaPredicted RBP13.9□□□□□ -0.18
HDAC1-208ENST00000482310 MBTPS2O43462 519 aa13.9□□□□□ -0.18
HDAC1-208ENST00000482310 GJB6O95452 261 aa13.9□□□□□ -0.18
HDAC1-208ENST00000482310 ABCB4P21439 1286 aa13.9□□□□□ -0.18
HDAC1-208ENST00000482310 CDH5P33151 784 aaPredicted RBP13.9□□□□□ -0.18
HDAC1-208ENST00000482310 MTHFRP42898 656 aa13.9□□□□□ -0.18
HDAC1-208ENST00000482310 ACADSBP45954 432 aa13.9□□□□□ -0.18
HDAC1-208ENST00000482310 GSDMDP57764 484 aa13.9□□□□□ -0.18
HDAC1-208ENST00000482310 CENPCQ03188 943 aa13.9□□□□□ -0.18
HDAC1-208ENST00000482310 SMAD4Q13485 552 aaKnown RBP13.9□□□□□ -0.18
HDAC1-208ENST00000482310 CBX2Q14781 532 aaPredicted RBP13.9□□□□□ -0.18
HDAC1-208ENST00000482310 MTF1Q14872 753 aa13.9□□□□□ -0.18
HDAC1-208ENST00000482310 CCDC122Q5T0U0 273 aa13.9□□□□□ -0.18
HDAC1-208ENST00000482310 CYP26C1Q6V0L0 522 aa13.9□□□□□ -0.18
HDAC1-208ENST00000482310 HFE2Q6ZVN8 426 aa13.9□□□□□ -0.18
HDAC1-208ENST00000482310 MAB21L3Q8N8X9 362 aa13.9□□□□□ -0.18
HDAC1-208ENST00000482310 ADAMTS19Q8TE59 1207 aa13.9□□□□□ -0.18
HDAC1-208ENST00000482310 ATXN2LQ8WWM7 1075 aaKnown RBP13.9□□□□□ -0.18
HDAC1-208ENST00000482310 TRMT2BQ96GJ1 504 aaKnown RBP13.9□□□□□ -0.18
HDAC1-208ENST00000482310 HSFY1Q96LI6 401 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms