RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 SDK1Q7Z5N4 2213 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 E2F8A0AVK6 867 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 SLC9A3R1O14745 358 aaPredicted RBP10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 COCHO43405 550 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 GREM1O60565 184 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 LRP3O75074 770 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 CILPO75339 1184 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 NFATC1O95644 943 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 TRIM49P0CI25 452 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 TRIM49CP0CI26 452 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 EIF2DP41214 584 aaKnown RBP10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 IFNAR2P48551 515 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 SLC5A3P53794 718 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 NR1H3Q13133 447 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 PNOCQ13519 176 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 HECTD3Q5T447 861 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 ZNF658Q5TYW1 1059 aaPredicted RBP10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 KRT39Q6A163 491 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 LAIR1Q6GTX8 287 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 RHBDF2Q6PJF5 856 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 SYT13Q7L8C5 426 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 KIAA2013Q8IYS2 634 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 SLC2A14Q8TDB8 520 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 SEMA4DQ92854 862 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 CD101Q93033 1021 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 EXOC4Q96A65 974 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 CCDC34Q96HJ3 373 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 IPO9Q96P70 1041 aaKnown RBP10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 GTPBP4Q9BZE4 634 aaKnown RBP10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 NIF3L1Q9GZT8 377 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 PNPLA8Q9NP80 782 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 PARD6AQ9NPB6 346 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 CYLDQ9NQC7 956 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 KRT82Q9NSB4 513 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 RMND1Q9NWS8 449 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 SCML2Q9UQR0 700 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 PCDHA5Q9Y5H7 936 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 CPQQ9Y646 472 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 ATG2BQ96BY7 2078 aa10.3□□□□□ -0.76
TMEM39A-207ENST00000482162 DMXL1Q9Y485 3027 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 K7EQS6 105 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 CETN3O15182 167 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 RNF40O75150 1001 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 AP1G2O75843 785 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 CYP17A1P05093 508 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 RETP07949 1114 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 ATXN8OSP0DMR3 200 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 KRT13P13646 458 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 CCDC130P13994 396 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 PIK3CAP42336 1068 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 PMS1P54277 932 aaKnown RBP10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 SIM2Q14190 667 aaPredicted RBP10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 DHCR24Q15392 516 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 ANKRD40Q6AI12 368 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 KLHDC10Q6PID8 442 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 FOXR2Q6PJQ5 311 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 SCARA5Q6ZMJ2 495 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 CLEC20AQ6ZU45 233 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 HTR3DQ70Z44 454 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 FILIP1Q7Z7B0 1213 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 DDX42Q86XP3 938 aaKnown RBP eCLIP10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 SMYD4Q8IYR2 804 aaPredicted RBP10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 PHTF2Q8N3S3 785 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 TTC39CQ8N584 583 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 USP33Q8TEY7 942 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 OTUB2Q96DC9 234 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 CYFIP2Q96F07 1278 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 ZC3H10Q96K80 434 aaKnown RBP10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 NT5C1AQ9BXI3 368 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 UBXN6Q9BZV1 441 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 FBXO44Q9H4M3 255 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 GMIPQ9P107 970 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 CFAP97Q9P2B7 532 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 TBC1D14Q9P2M4 693 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 NCDNQ9UBB6 729 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 EBF1Q9UH73 591 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 USP3Q9Y6I4 520 aa10.29□□□□□ -0.76
TMEM39A-207ENST00000482162 PMM2O15305 246 aa10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 SLC16A3O15427 465 aaKnown RBP10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 KIF11P52732 1056 aa10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 FKBP3Q00688 224 aaKnown RBP10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 SRSF5Q13243 272 aaKnown RBP10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 ORC1Q13415 861 aa10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 PUM1Q14671 1186 aaKnown RBP eCLIP10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 ARHGAP17Q68EM7 881 aa10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 ETFBKMTQ8IXQ9 262 aa10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 FBXL13Q8NEE6 735 aa10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 CCDC26Q8TAB7 109 aa10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 GAB3Q8WWW8 586 aa10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 SECISBP2LQ93073 1101 aaKnown RBP10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 FBXO32Q969P5 355 aa10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 WBP2Q969T9 261 aa10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 EEF2KMTQ96G04 330 aa10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 LOXL4Q96JB6 756 aa10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 MED10Q9BTT4 135 aa10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 KLF16Q9BXK1 252 aaPredicted RBP10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 DUSP16Q9BY84 665 aa10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 IMPG2Q9BZV3 1241 aa10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 CCSER2Q9H7U1 834 aa10.28□□□□□ -0.76
TMEM39A-207ENST00000482162 POLR3BQ9NW08 1133 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms