RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 STX16O14662 325 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 DNPH1O43598 174 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 FMO6PO60774 539 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 SOCS5O75159 536 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 ZNF205O95201 554 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 ABHD16AO95870 558 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 HSP90AB1P08238 724 aaKnown RBP3.64□□□□□ -1.83
SMC6-208ENST00000481708 RPL17P18621 184 aaKnown RBP3.64□□□□□ -1.83
SMC6-208ENST00000481708 FKBP1BP68106 108 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 SLC12A1Q13621 1099 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 DCTN1Q14203 1278 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 TXNRD3Q86VQ6 643 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 GPC2Q8N158 579 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 SRBD1Q8N5C6 995 aaKnown RBP3.64□□□□□ -1.83
SMC6-208ENST00000481708 USHBP1Q8N6Y0 703 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 AGBL5Q8NDL9 886 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 IL17RDQ8NFM7 739 aa3.64□□□□□ -1.83
SMC6-208ENST00000481708 UHMK1Q8TAS1 419 aaKnown RBP3.64□□□□□ -1.83
SMC6-208ENST00000481708 MRPL46Q9H2W6 279 aaKnown RBP3.64□□□□□ -1.83
SMC6-208ENST00000481708 HECAQ9UBI9 543 aaPredicted RBP3.64□□□□□ -1.83
SMC6-208ENST00000481708 MYH2Q9UKX2 1941 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 FAM90A20PA6NIJ5 464 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 N4BP3O15049 544 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 FOXN1O15353 648 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 DHHO43323 396 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 APOL3O95236 402 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 MATN4O95460 622 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 FAM87AP0C7U9 286 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 CSH1P0DML2 217 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 CSH2P0DML3 217 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 GNAT1P11488 350 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 MYCLP12524 364 aaPredicted RBP3.63□□□□□ -1.83
SMC6-208ENST00000481708 GSPT1P15170 499 aaKnown RBP3.63□□□□□ -1.83
SMC6-208ENST00000481708 ETV3P41162 512 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 SLC16A1P53985 500 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 RNF4P78317 190 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 TLE1Q04724 770 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 TNK2Q07912 1038 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 IRF3Q14653 427 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 KRTCAP3Q53RY4 240 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 BEND4Q6ZU67 534 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 PIWIL3Q7Z3Z3 882 aaKnown RBP3.63□□□□□ -1.83
SMC6-208ENST00000481708 RHOT1Q8IXI2 618 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 TTC39CQ8N584 583 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 ZNF384Q8TF68 577 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 FNBP1Q96RU3 617 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 AGAP2Q99490 1192 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 C7orf25Q9BPX7 421 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 FOXP3Q9BZS1 431 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 KCNF1Q9H3M0 494 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 SEPSECSQ9HD40 501 aaKnown RBP3.63□□□□□ -1.83
SMC6-208ENST00000481708 KCNH7Q9NS40 1196 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 KCND3Q9UK17 655 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 RCE1Q9Y256 329 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 ZNF804BA4D1E1 1349 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 SYNRGQ9UMZ2 1314 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 HMX2A2RU54 273 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 CAPN9O14815 690 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 SRGAP2O75044 1071 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 F9P00740 461 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 SBK3P0C264 359 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 UBXN2AP68543 259 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 SLC14A1Q13336 389 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 NFKBIBQ15653 356 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 ADIPOQQ15848 244 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 AOC3Q16853 763 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 ZNF674Q2M3X9 581 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 BTBD16Q32M84 506 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 DUSP28Q4G0W2 176 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 EEF1DP3Q658K8 133 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 CD163Q86VB7 1156 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 ANKRD35Q8N283 1001 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 CPT1CQ8TCG5 803 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 DACH2Q96NX9 599 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 ACSS2Q9NR19 701 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 COQ3Q9NZJ6 369 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 EBF1Q9UH73 591 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 RRP15Q9Y3B9 282 aaKnown RBP3.63□□□□□ -1.83
SMC6-208ENST00000481708 DGKIO75912 1065 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 FSBPO95073 299 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 MPIG6BO95866 241 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 ANXA2P07355 339 aaKnown RBP3.63□□□□□ -1.83
SMC6-208ENST00000481708 PCSK1P29120 753 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 EPHA5P54756 1037 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 SEMA3AQ14563 771 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 KYNUQ16719 465 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 KHDC1LQ5JSQ8 128 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 ATG16L1Q676U5 607 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 CCBE1Q6UXH8 406 aaPredicted RBP3.63□□□□□ -1.83
SMC6-208ENST00000481708 PHYKPLQ8IUZ5 450 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 SAMD14Q8IZD0 417 aaPredicted RBP3.63□□□□□ -1.83
SMC6-208ENST00000481708 OR8H3Q8N146 312 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 USP6NLQ92738 828 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 IQCDQ96DY2 449 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 FAM120BQ96EK7 910 aaKnown RBP3.63□□□□□ -1.83
SMC6-208ENST00000481708 LTV1Q96GA3 475 aaPredicted RBP3.63□□□□□ -1.83
SMC6-208ENST00000481708 CHAMP1Q96JM3 812 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 PTCHD1Q96NR3 888 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 MTG2Q9H4K7 406 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 TAF1DQ9H5J8 278 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms