RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 ADORA2BP29275 332 aa23.54■■□□□ 1.36
GPCPD1-206ENST00000481690 UNC93AQ86WB7 457 aa23.54■■□□□ 1.36
GPCPD1-206ENST00000481690 RPLP0P6Q8NHW5 317 aa23.54■■□□□ 1.36
GPCPD1-206ENST00000481690 POLR3BQ9NW08 1133 aaPredicted RBP23.54■■□□□ 1.36
GPCPD1-206ENST00000481690 GMIPQ9P107 970 aa23.54■■□□□ 1.36
GPCPD1-206ENST00000481690 TNFRSF10BO14763 440 aa23.53■■□□□ 1.36
GPCPD1-206ENST00000481690 CD58P19256 250 aa23.53■■□□□ 1.36
GPCPD1-206ENST00000481690 HOXA6P31267 233 aa23.53■■□□□ 1.36
GPCPD1-206ENST00000481690 MAP3K7CLP57077 242 aa23.53■■□□□ 1.36
GPCPD1-206ENST00000481690 SPEM2Q0P670 501 aa23.53■■□□□ 1.36
GPCPD1-206ENST00000481690 HECTD3Q5T447 861 aa23.53■■□□□ 1.36
GPCPD1-206ENST00000481690 DDX42Q86XP3 938 aaKnown RBP eCLIP23.53■■□□□ 1.362e-6■■□□□ 12.3
GPCPD1-206ENST00000481690 CRYBG2Q8N1P7 616 aa23.53■■□□□ 1.36
GPCPD1-206ENST00000481690 C12orf29Q8N999 325 aa23.53■■□□□ 1.36
GPCPD1-206ENST00000481690 CCDC150Q8NCX0 1101 aa23.53■■□□□ 1.36
GPCPD1-206ENST00000481690 ZMIZ2Q8NF64 920 aa23.53■■□□□ 1.36
GPCPD1-206ENST00000481690 EEF2KMTQ96G04 330 aa23.53■■□□□ 1.36
GPCPD1-206ENST00000481690 SMOQ99835 787 aa23.53■■□□□ 1.36
GPCPD1-206ENST00000481690 APOBEC3GQ9HC16 384 aaKnown RBP23.53■■□□□ 1.36
GPCPD1-206ENST00000481690 CEP250Q9BV73 2442 aa23.52■■□□□ 1.36
GPCPD1-206ENST00000481690 SLC9A3R1O14745 358 aaPredicted RBP23.52■■□□□ 1.36
GPCPD1-206ENST00000481690 COCHO43405 550 aa23.52■■□□□ 1.36
GPCPD1-206ENST00000481690 BEST1O76090 585 aa23.52■■□□□ 1.36
GPCPD1-206ENST00000481690 CYP17A1P05093 508 aa23.52■■□□□ 1.36
GPCPD1-206ENST00000481690 RSPO4Q2I0M5 234 aaPredicted RBP23.52■■□□□ 1.36
GPCPD1-206ENST00000481690 ZCWPW2Q504Y3 356 aa23.52■■□□□ 1.36
GPCPD1-206ENST00000481690 ERMP1Q7Z2K6 904 aa23.52■■□□□ 1.36
GPCPD1-206ENST00000481690 FMR1NBQ8N0W7 255 aaPredicted RBP23.52■■□□□ 1.36
GPCPD1-206ENST00000481690 EZH1Q92800 747 aaPredicted RBP23.52■■□□□ 1.36
GPCPD1-206ENST00000481690 JAKMIP2Q96AA8 810 aa23.52■■□□□ 1.36
GPCPD1-206ENST00000481690 HHIPQ96QV1 700 aa23.52■■□□□ 1.36
GPCPD1-206ENST00000481690 TWNKQ96RR1 684 aa23.52■■□□□ 1.36
GPCPD1-206ENST00000481690 NIF3L1Q9GZT8 377 aa23.52■■□□□ 1.36
GPCPD1-206ENST00000481690 NACA2Q9H009 215 aa23.52■■□□□ 1.36
GPCPD1-206ENST00000481690 CCSER2Q9H7U1 834 aa23.52■■□□□ 1.36
GPCPD1-206ENST00000481690 TMEM8AQ9HCN3 771 aa23.52■■□□□ 1.36
GPCPD1-206ENST00000481690 PARD6AQ9NPB6 346 aa23.52■■□□□ 1.36
GPCPD1-206ENST00000481690 RMND1Q9NWS8 449 aa23.52■■□□□ 1.36
GPCPD1-206ENST00000481690 FAM200BP0CF97 657 aa23.51■■□□□ 1.35
GPCPD1-206ENST00000481690 SEC13P55735 322 aa23.51■■□□□ 1.35
GPCPD1-206ENST00000481690 FOXK2Q01167 660 aa23.51■■□□□ 1.35
GPCPD1-206ENST00000481690 INCA1Q0VD86 236 aa23.51■■□□□ 1.35
GPCPD1-206ENST00000481690 EDRF1Q3B7T1 1238 aa23.51■■□□□ 1.35
GPCPD1-206ENST00000481690 CYP3A43Q9HB55 503 aa23.51■■□□□ 1.35
GPCPD1-206ENST00000481690 COMMD8Q9NX08 183 aa23.51■■□□□ 1.35
GPCPD1-206ENST00000481690 DMXL1Q9Y485 3027 aa23.5■■□□□ 1.35
GPCPD1-206ENST00000481690 RETP07949 1114 aa23.5■■□□□ 1.35
GPCPD1-206ENST00000481690 CCDC192P0DO97 292 aa23.5■■□□□ 1.35
GPCPD1-206ENST00000481690 EPB41P11171 864 aaKnown RBP23.5■■□□□ 1.35
GPCPD1-206ENST00000481690 OPRD1P41143 372 aa23.5■■□□□ 1.35
GPCPD1-206ENST00000481690 NUCB2P80303 420 aa23.5■■□□□ 1.35
GPCPD1-206ENST00000481690 LMNB2Q03252 620 aa23.5■■□□□ 1.35
GPCPD1-206ENST00000481690 ENPEPQ07075 957 aa23.5■■□□□ 1.35
GPCPD1-206ENST00000481690 PUM1Q14671 1186 aaKnown RBP eCLIP23.5■■□□□ 1.35
GPCPD1-206ENST00000481690 DHCR24Q15392 516 aa23.5■■□□□ 1.35
GPCPD1-206ENST00000481690 KRT39Q6A163 491 aa23.5■■□□□ 1.35
GPCPD1-206ENST00000481690 DGLUCYQ7Z3D6 616 aa23.5■■□□□ 1.35
GPCPD1-206ENST00000481690 KIAA1958Q8N8K9 716 aa23.5■■□□□ 1.35
GPCPD1-206ENST00000481690 ACDQ96AP0 544 aa23.5■■□□□ 1.35
GPCPD1-206ENST00000481690 NT5C1AQ9BXI3 368 aa23.5■■□□□ 1.35
GPCPD1-206ENST00000481690 FBXO44Q9H4M3 255 aa23.5■■□□□ 1.35
GPCPD1-206ENST00000481690 CSNK1G1Q9HCP0 422 aa23.5■■□□□ 1.35
GPCPD1-206ENST00000481690 IL37Q9NZH6 218 aa23.5■■□□□ 1.35
GPCPD1-206ENST00000481690 SH3BP1Q9Y3L3 701 aa23.5■■□□□ 1.35
GPCPD1-206ENST00000481690 CETN3O15182 167 aa23.49■■□□□ 1.35
GPCPD1-206ENST00000481690 MXI1P50539 228 aa23.49■■□□□ 1.35
GPCPD1-206ENST00000481690 GAB4Q2WGN9 574 aa23.49■■□□□ 1.35
GPCPD1-206ENST00000481690 ADGRG2Q8IZP9 1017 aa23.49■■□□□ 1.35
GPCPD1-206ENST00000481690 FAM160A2Q8N612 972 aaPredicted RBP23.49■■□□□ 1.35
GPCPD1-206ENST00000481690 ERCC4Q92889 916 aaPredicted RBP23.49■■□□□ 1.35
GPCPD1-206ENST00000481690 CYFIP2Q96F07 1278 aa23.49■■□□□ 1.35
GPCPD1-206ENST00000481690 RPP40O75818 363 aaKnown RBP23.48■■□□□ 1.35
GPCPD1-206ENST00000481690 ADH1CP00326 375 aa23.48■■□□□ 1.35
GPCPD1-206ENST00000481690 IRF1P10914 325 aa23.48■■□□□ 1.35
GPCPD1-206ENST00000481690 GTF2H1P32780 548 aa23.48■■□□□ 1.35
GPCPD1-206ENST00000481690 PRCPP42785 496 aa23.48■■□□□ 1.35
GPCPD1-206ENST00000481690 TUBP50607 506 aa23.48■■□□□ 1.35
GPCPD1-206ENST00000481690 DMC1Q14565 340 aa23.48■■□□□ 1.35
GPCPD1-206ENST00000481690 ZNF658Q5TYW1 1059 aaPredicted RBP23.48■■□□□ 1.35
GPCPD1-206ENST00000481690 SNX30Q5VWJ9 437 aa23.48■■□□□ 1.35
GPCPD1-206ENST00000481690 CLEC20AQ6ZU45 233 aa23.48■■□□□ 1.35
GPCPD1-206ENST00000481690 SYT13Q7L8C5 426 aa23.48■■□□□ 1.35
GPCPD1-206ENST00000481690 GPRIN1Q7Z2K8 1008 aa23.48■■□□□ 1.35
GPCPD1-206ENST00000481690 CAMKK1Q8N5S9 505 aa23.48■■□□□ 1.35
GPCPD1-206ENST00000481690 CCDC26Q8TAB7 109 aa23.48■■□□□ 1.35
GPCPD1-206ENST00000481690 GAB3Q8WWW8 586 aa23.48■■□□□ 1.35
GPCPD1-206ENST00000481690 ZFRQ96KR1 1074 aaKnown RBP23.48■■□□□ 1.35
GPCPD1-206ENST00000481690 HNRNPABQ99729 332 aaKnown RBP23.48■■□□□ 1.35
GPCPD1-206ENST00000481690 TSG101Q99816 390 aa23.48■■□□□ 1.35
GPCPD1-206ENST00000481690 DNAI2Q9GZS0 605 aa23.48■■□□□ 1.35
GPCPD1-206ENST00000481690 TLR8Q9NR97 1041 aaKnown RBP23.48■■□□□ 1.35
GPCPD1-206ENST00000481690 TBC1D14Q9P2M4 693 aa23.48■■□□□ 1.35
GPCPD1-206ENST00000481690 CDV3Q9UKY7 258 aaKnown RBP23.48■■□□□ 1.35
GPCPD1-206ENST00000481690 SDK1Q7Z5N4 2213 aa23.48■■□□□ 1.35
GPCPD1-206ENST00000481690 CCDC163A0A0D9SF12 145 aa23.47■■□□□ 1.35
GPCPD1-206ENST00000481690 E2F8A0AVK6 867 aa23.47■■□□□ 1.35
GPCPD1-206ENST00000481690 FAM92AA1XBS5 289 aa23.47■■□□□ 1.35
GPCPD1-206ENST00000481690 CILPO75339 1184 aa23.47■■□□□ 1.35
GPCPD1-206ENST00000481690 SMC2O95347 1197 aa23.47■■□□□ 1.35
GPCPD1-206ENST00000481690 ZDHHC11BP0C7U3 371 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms