RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 EML5Q05BV3 1969 aa19.69■□□□□ 0.74
CLK1-211ENST00000481641 ATP8B3O60423 1300 aa19.69■□□□□ 0.74
CLK1-211ENST00000481641 KIAA1549LQ6ZVL6 1849 aa19.68■□□□□ 0.74
CLK1-211ENST00000481641 IKBKBO14920 756 aa19.68■□□□□ 0.74
CLK1-211ENST00000481641 COCHO43405 550 aa19.68■□□□□ 0.74
CLK1-211ENST00000481641 P4HA1P13674 534 aa19.68■□□□□ 0.74
CLK1-211ENST00000481641 SLC6A11P48066 632 aa19.68■□□□□ 0.74
CLK1-211ENST00000481641 PGFP49763 221 aa19.68■□□□□ 0.74
CLK1-211ENST00000481641 ATXN1P54253 815 aaKnown RBP19.68■□□□□ 0.74
CLK1-211ENST00000481641 SEC13P55735 322 aa19.68■□□□□ 0.74
CLK1-211ENST00000481641 LMNB2Q03252 620 aa19.68■□□□□ 0.74
CLK1-211ENST00000481641 PPP3CAQ08209 521 aa19.68■□□□□ 0.74
CLK1-211ENST00000481641 FBXO43Q4G163 708 aa19.68■□□□□ 0.74
CLK1-211ENST00000481641 SFTPA1Q8IWL2 248 aa19.68■□□□□ 0.74
CLK1-211ENST00000481641 SMYD4Q8IYR2 804 aaPredicted RBP19.68■□□□□ 0.74
CLK1-211ENST00000481641 ADGRG2Q8IZP9 1017 aa19.68■□□□□ 0.74
CLK1-211ENST00000481641 EXOC4Q96A65 974 aa19.68■□□□□ 0.74
CLK1-211ENST00000481641 SMARCD1Q96GM5 515 aa19.68■□□□□ 0.74
CLK1-211ENST00000481641 TWNKQ96RR1 684 aa19.68■□□□□ 0.74
CLK1-211ENST00000481641 CCSER2Q9H7U1 834 aa19.68■□□□□ 0.74
CLK1-211ENST00000481641 SEMA4GQ9NTN9 838 aa19.68■□□□□ 0.74
CLK1-211ENST00000481641 GMIPQ9P107 970 aa19.68■□□□□ 0.74
CLK1-211ENST00000481641 SPAG17Q6Q759 2223 aa19.67■□□□□ 0.74
CLK1-211ENST00000481641 K7EQS6 105 aa19.67■□□□□ 0.74
CLK1-211ENST00000481641 AXIN1O15169 862 aa19.67■□□□□ 0.74
CLK1-211ENST00000481641 RPP40O75818 363 aaKnown RBP19.67■□□□□ 0.74
CLK1-211ENST00000481641 KIF20AO95235 890 aa19.67■□□□□ 0.74
CLK1-211ENST00000481641 ADORA2BP29275 332 aa19.67■□□□□ 0.74
CLK1-211ENST00000481641 MAP3K7CLP57077 242 aa19.67■□□□□ 0.74
CLK1-211ENST00000481641 MESP2Q0VG99 397 aa19.67■□□□□ 0.74
CLK1-211ENST00000481641 DHCR24Q15392 516 aa19.67■□□□□ 0.74
CLK1-211ENST00000481641 KBTBD6Q86V97 674 aa19.67■□□□□ 0.74
CLK1-211ENST00000481641 FAM186BQ8IYM0 893 aa19.67■□□□□ 0.74
CLK1-211ENST00000481641 CRYBG2Q8N1P7 616 aa19.67■□□□□ 0.74
CLK1-211ENST00000481641 PDZD8Q8NEN9 1154 aa19.67■□□□□ 0.74
CLK1-211ENST00000481641 TAS1R2Q8TE23 839 aa19.67■□□□□ 0.74
CLK1-211ENST00000481641 GAB3Q8WWW8 586 aa19.67■□□□□ 0.74
CLK1-211ENST00000481641 TAF4BQ92750 862 aa19.67■□□□□ 0.74
CLK1-211ENST00000481641 WBP2Q969T9 261 aa19.67■□□□□ 0.74
CLK1-211ENST00000481641 EEF2KMTQ96G04 330 aa19.67■□□□□ 0.74
CLK1-211ENST00000481641 ZFRQ96KR1 1074 aaKnown RBP19.67■□□□□ 0.74
CLK1-211ENST00000481641 IL37Q9NZH6 218 aa19.67■□□□□ 0.74
CLK1-211ENST00000481641 ATP6V1DQ9Y5K8 247 aa19.67■□□□□ 0.74
CLK1-211ENST00000481641 SPTBN2O15020 2390 aa19.66■□□□□ 0.74
CLK1-211ENST00000481641 PRR5-ARHGAP8B1AHC4 643 aa19.66■□□□□ 0.74
CLK1-211ENST00000481641 MAPK13O15264 365 aa19.66■□□□□ 0.74
CLK1-211ENST00000481641 CCDC192P0DO97 292 aa19.66■□□□□ 0.74
CLK1-211ENST00000481641 ARHGAP8P85298 464 aa19.66■□□□□ 0.74
CLK1-211ENST00000481641 ADAM9Q13443 819 aa19.66■□□□□ 0.74
CLK1-211ENST00000481641 DMC1Q14565 340 aa19.66■□□□□ 0.74
CLK1-211ENST00000481641 CCDC6Q16204 474 aa19.66■□□□□ 0.74
CLK1-211ENST00000481641 NFIL3Q16649 462 aa19.66■□□□□ 0.74
CLK1-211ENST00000481641 HECTD3Q5T447 861 aa19.66■□□□□ 0.74
CLK1-211ENST00000481641 RHBDF2Q6PJF5 856 aa19.66■□□□□ 0.74
CLK1-211ENST00000481641 UNC93AQ86WB7 457 aa19.66■□□□□ 0.74
CLK1-211ENST00000481641 C12orf40Q86WS4 652 aa19.66■□□□□ 0.74
CLK1-211ENST00000481641 GUF1Q8N442 669 aaKnown RBP19.66■□□□□ 0.74
CLK1-211ENST00000481641 OVCA2Q8WZ82 227 aa19.66■□□□□ 0.74
CLK1-211ENST00000481641 JAKMIP2Q96AA8 810 aa19.66■□□□□ 0.74
CLK1-211ENST00000481641 CDV3Q9UKY7 258 aaKnown RBP19.66■□□□□ 0.74
CLK1-211ENST00000481641 KRT13P13646 458 aa19.65■□□□□ 0.74
CLK1-211ENST00000481641 PSMC2P35998 433 aaKnown RBP19.65■□□□□ 0.74
CLK1-211ENST00000481641 PNOCQ13519 176 aa19.65■□□□□ 0.74
CLK1-211ENST00000481641 C2orf27AQ580R0 203 aa19.65■□□□□ 0.74
CLK1-211ENST00000481641 INTS8Q75QN2 995 aaKnown RBP19.65■□□□□ 0.74
CLK1-211ENST00000481641 SYT13Q7L8C5 426 aa19.65■□□□□ 0.74
CLK1-211ENST00000481641 GPRIN1Q7Z2K8 1008 aa19.65■□□□□ 0.74
CLK1-211ENST00000481641 CAMKK1Q8N5S9 505 aa19.65■□□□□ 0.74
CLK1-211ENST00000481641 USP33Q8TEY7 942 aa19.65■□□□□ 0.74
CLK1-211ENST00000481641 ARRDC1-AS1Q9H2J1 176 aa19.65■□□□□ 0.74
CLK1-211ENST00000481641 CCDC163A0A0D9SF12 145 aa19.64■□□□□ 0.73
CLK1-211ENST00000481641 DCDC2BA2VCK2 349 aa19.64■□□□□ 0.73
CLK1-211ENST00000481641 SLC9A3R1O14745 358 aaPredicted RBP19.64■□□□□ 0.73
CLK1-211ENST00000481641 DCLK1O15075 740 aa19.64■□□□□ 0.73
CLK1-211ENST00000481641 GDF9O60383 454 aa19.64■□□□□ 0.73
CLK1-211ENST00000481641 ZDHHC11BP0C7U3 371 aa19.64■□□□□ 0.73
CLK1-211ENST00000481641 IRF1P10914 325 aa19.64■□□□□ 0.73
CLK1-211ENST00000481641 CD58P19256 250 aa19.64■□□□□ 0.73
CLK1-211ENST00000481641 CSRP2Q16527 193 aa19.64■□□□□ 0.73
CLK1-211ENST00000481641 ZCWPW2Q504Y3 356 aa19.64■□□□□ 0.73
CLK1-211ENST00000481641 SNX30Q5VWJ9 437 aa19.64■□□□□ 0.73
CLK1-211ENST00000481641 PRR23CQ6ZRP0 262 aa19.64■□□□□ 0.73
CLK1-211ENST00000481641 CACNA2D4Q7Z3S7 1137 aa19.64■□□□□ 0.73
CLK1-211ENST00000481641 CCDC33Q8N5R6 958 aa19.64■□□□□ 0.73
CLK1-211ENST00000481641 WHAMMQ8TF30 809 aa19.64■□□□□ 0.73
CLK1-211ENST00000481641 CSNK1G1Q9HCP0 422 aa19.64■□□□□ 0.73
CLK1-211ENST00000481641 NCOR2Q9Y618 2525 aa19.64■□□□□ 0.73
CLK1-211ENST00000481641 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.63■□□□□ 0.73
CLK1-211ENST00000481641 FAM92AA1XBS5 289 aa19.63■□□□□ 0.73
CLK1-211ENST00000481641 LRP3O75074 770 aa19.63■□□□□ 0.73
CLK1-211ENST00000481641 TBX18O95935 607 aa19.63■□□□□ 0.73
CLK1-211ENST00000481641 FAM200BP0CF97 657 aa19.63■□□□□ 0.73
CLK1-211ENST00000481641 RPL13P26373 211 aaKnown RBP19.63■□□□□ 0.73
CLK1-211ENST00000481641 INCA1Q0VD86 236 aa19.63■□□□□ 0.73
CLK1-211ENST00000481641 LY6G5CQ5SRR4 150 aa19.63■□□□□ 0.73
CLK1-211ENST00000481641 DDX42Q86XP3 938 aaKnown RBP eCLIP19.63■□□□□ 0.73
CLK1-211ENST00000481641 SEMA4DQ92854 862 aa19.63■□□□□ 0.73
CLK1-211ENST00000481641 ACDQ96AP0 544 aa19.63■□□□□ 0.73
CLK1-211ENST00000481641 CYFIP2Q96F07 1278 aa19.63■□□□□ 0.73
CLK1-211ENST00000481641 HNRNPABQ99729 332 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms