RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 DHX32Q7L7V1 743 aaKnown RBP12.8□□□□□ -0.36
USP11-208ENST00000480104 NAT16Q8N8M0 369 aa12.8□□□□□ -0.36
USP11-208ENST00000480104 VCPIP1Q96JH7 1222 aa12.8□□□□□ -0.36
USP11-208ENST00000480104 MYRFLQ96LU7 910 aa12.8□□□□□ -0.36
USP11-208ENST00000480104 DRC1Q96MC2 740 aa12.8□□□□□ -0.36
USP11-208ENST00000480104 PHF12Q96QT6 1004 aa12.8□□□□□ -0.36
USP11-208ENST00000480104 SLC26A6Q9BXS9 759 aa12.8□□□□□ -0.36
USP11-208ENST00000480104 TM9SF3Q9HD45 589 aa12.8□□□□□ -0.36
USP11-208ENST00000480104 PLEKHB1Q9UF11 243 aaPredicted RBP12.8□□□□□ -0.36
USP11-208ENST00000480104 MYOFQ9NZM1 2061 aa12.79□□□□□ -0.36
USP11-208ENST00000480104 SLC9A3R1O14745 358 aaPredicted RBP12.79□□□□□ -0.36
USP11-208ENST00000480104 PRPF40AO75400 957 aaKnown RBP12.79□□□□□ -0.36
USP11-208ENST00000480104 CYP11A1P05108 521 aa12.79□□□□□ -0.36
USP11-208ENST00000480104 FAM87AP0C7U9 286 aa12.79□□□□□ -0.36
USP11-208ENST00000480104 CXCL8P10145 99 aa12.79□□□□□ -0.36
USP11-208ENST00000480104 GCFC2P16383 781 aaKnown RBP12.79□□□□□ -0.36
USP11-208ENST00000480104 LILRA4P59901 499 aa12.79□□□□□ -0.36
USP11-208ENST00000480104 SMARCB1Q12824 385 aa12.79□□□□□ -0.36
USP11-208ENST00000480104 SAFBQ15424 915 aaKnown RBP eCLIP12.79□□□□□ -0.36
USP11-208ENST00000480104 CREB3L3Q68CJ9 461 aa12.79□□□□□ -0.36
USP11-208ENST00000480104 CCDC81Q6ZN84 652 aa12.79□□□□□ -0.36
USP11-208ENST00000480104 BLIDQ8IZY5 108 aa12.79□□□□□ -0.36
USP11-208ENST00000480104 KRI1Q8N9T8 703 aaKnown RBP12.79□□□□□ -0.36
USP11-208ENST00000480104 TCHPQ9BT92 498 aa12.79□□□□□ -0.36
USP11-208ENST00000480104 TARS2Q9BW92 718 aaKnown RBP12.79□□□□□ -0.36
USP11-208ENST00000480104 POLD4Q9HCU8 107 aa12.79□□□□□ -0.36
USP11-208ENST00000480104 ASCL3Q9NQ33 180 aa12.79□□□□□ -0.36
USP11-208ENST00000480104 SH3GLB2Q9NR46 395 aa12.79□□□□□ -0.36
USP11-208ENST00000480104 TMLHEQ9NVH6 421 aa12.79□□□□□ -0.36
USP11-208ENST00000480104 SMPD4Q9NXE4 827 aa12.79□□□□□ -0.36
USP11-208ENST00000480104 DEC1Q9P2X7 70 aa12.79□□□□□ -0.36
USP11-208ENST00000480104 STARD13Q9Y3M8 1113 aa12.79□□□□□ -0.36
USP11-208ENST00000480104 PCDHB5Q9Y5E4 795 aa12.79□□□□□ -0.36
USP11-208ENST00000480104 A0A1B0GTQ1 180 aa12.78□□□□□ -0.36
USP11-208ENST00000480104 K7ERI5 159 aa12.78□□□□□ -0.36
USP11-208ENST00000480104 TRAK2O60296 914 aa12.78□□□□□ -0.36
USP11-208ENST00000480104 CCNT1O60563 726 aaKnown RBP12.78□□□□□ -0.36
USP11-208ENST00000480104 PROZP22891 400 aa12.78□□□□□ -0.36
USP11-208ENST00000480104 TPMTP51580 245 aa12.78□□□□□ -0.36
USP11-208ENST00000480104 FOXK1P85037 733 aa12.78□□□□□ -0.36
USP11-208ENST00000480104 EXOSC10Q01780 885 aaKnown RBP12.78□□□□□ -0.36
USP11-208ENST00000480104 ILKQ13418 452 aa12.78□□□□□ -0.36
USP11-208ENST00000480104 NPY5RQ15761 445 aa12.78□□□□□ -0.36
USP11-208ENST00000480104 IGFBP7Q16270 282 aa12.78□□□□□ -0.36
USP11-208ENST00000480104 PRAMEF14Q5SWL7 426 aa12.78□□□□□ -0.36
USP11-208ENST00000480104 MPZL3Q6UWV2 235 aa12.78□□□□□ -0.36
USP11-208ENST00000480104 METTL3Q86U44 580 aaKnown RBP12.78□□□□□ -0.36
USP11-208ENST00000480104 LSMEM2Q8N112 164 aa12.78□□□□□ -0.36
USP11-208ENST00000480104 EID2Q8N6I1 236 aa12.78□□□□□ -0.36
USP11-208ENST00000480104 RNF26Q9BY78 433 aaPredicted RBP12.78□□□□□ -0.36
USP11-208ENST00000480104 MRPL4Q9BYD3 311 aaKnown RBP12.78□□□□□ -0.36
USP11-208ENST00000480104 ITM2CQ9NQX7 267 aa12.78□□□□□ -0.36
USP11-208ENST00000480104 CFAP97Q9P2B7 532 aa12.78□□□□□ -0.36
USP11-208ENST00000480104 PDZD2O15018 2839 aa12.77□□□□□ -0.36
USP11-208ENST00000480104 WASH3PC4AMC7 463 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 MT-CO3P00414 261 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 XRCC6P12956 609 aaKnown RBP eCLIP12.77□□□□□ -0.37
USP11-208ENST00000480104 GRIK1P39086 918 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 AFMP43652 599 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 PDE6CP51160 858 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 NUCB1Q02818 461 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 ZBTB6Q15916 424 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 FUT11Q495W5 492 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 BTBD8Q5XKL5 378 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 XKR5Q6UX68 686 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 NUDT18Q6ZVK8 323 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 NEK8Q86SG6 692 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 SMC5Q8IY18 1101 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 SLFN12Q8IYM2 578 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 KIAA1958Q8N8K9 716 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 FSIP1Q8NA03 581 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 EXTL1Q92935 676 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 IFT74Q96LB3 600 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 ARHGAP9Q9BRR9 750 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 MKRN2Q9H000 416 aaKnown RBP12.77□□□□□ -0.37
USP11-208ENST00000480104 EPN3Q9H201 632 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 RPF1Q9H9Y2 349 aaKnown RBP12.77□□□□□ -0.37
USP11-208ENST00000480104 THSD1Q9NS62 852 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 ADAMTS1Q9UHI8 967 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 UBQLN1Q9UMX0 589 aaKnown RBP12.77□□□□□ -0.37
USP11-208ENST00000480104 PCDHB6Q9Y5E3 794 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 CPQQ9Y646 472 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 PHLPP2Q6ZVD8 1323 aa12.77□□□□□ -0.37
USP11-208ENST00000480104 HOXC11O43248 304 aaPredicted RBP12.76□□□□□ -0.37
USP11-208ENST00000480104 ITGAVP06756 1048 aa12.76□□□□□ -0.37
USP11-208ENST00000480104 CYP11B2P19099 503 aa12.76□□□□□ -0.37
USP11-208ENST00000480104 CYP3A5P20815 502 aa12.76□□□□□ -0.37
USP11-208ENST00000480104 ABCB4P21439 1286 aa12.76□□□□□ -0.37
USP11-208ENST00000480104 OXTRP30559 389 aa12.76□□□□□ -0.37
USP11-208ENST00000480104 SLC7A9P82251 487 aa12.76□□□□□ -0.37
USP11-208ENST00000480104 GAD2Q05329 585 aa12.76□□□□□ -0.37
USP11-208ENST00000480104 ARL13BQ3SXY8 428 aa12.76□□□□□ -0.37
USP11-208ENST00000480104 TAS1R3Q7RTX0 852 aa12.76□□□□□ -0.37
USP11-208ENST00000480104 CACUL1Q86Y37 369 aa12.76□□□□□ -0.37
USP11-208ENST00000480104 DCP1BQ8IZD4 617 aaKnown RBP12.76□□□□□ -0.37
USP11-208ENST00000480104 SAP25Q8TEE9 199 aa12.76□□□□□ -0.37
USP11-208ENST00000480104 ZBTB45Q96K62 511 aaPredicted RBP12.76□□□□□ -0.37
USP11-208ENST00000480104 MMS19Q96T76 1030 aa12.76□□□□□ -0.37
USP11-208ENST00000480104 LSG1Q9H089 658 aaKnown RBP12.76□□□□□ -0.37
USP11-208ENST00000480104 C6orf106Q9H6K1 298 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms