RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 C4orf50Q6ZRC1 276 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 BBS12Q6ZW61 710 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 BEND5Q7L4P6 421 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 ZNF280BQ86YH2 543 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 CCDC105Q8IYK2 499 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 KRT222Q8N1A0 295 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 SIX6OS1Q8N1H7 587 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 FAM71BQ8TC56 605 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 RAPGEF5Q92565 580 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 NKD2Q969F2 451 aaPredicted RBP11.53□□□□□ -0.56
VTI1A-204ENST00000480057 MYLPFQ96A32 169 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 PIWIL1Q96J94 861 aaKnown RBP11.53□□□□□ -0.56
VTI1A-204ENST00000480057 SLC2A13Q96QE2 648 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 SMOQ99835 787 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 COLEC11Q9BWP8 271 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 CACNG4Q9UBN1 327 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 TBX21Q9UL17 535 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 NFU1Q9UMS0 254 aa11.53□□□□□ -0.56
VTI1A-204ENST00000480057 COL4A4P53420 1690 aaPredicted RBP11.52□□□□□ -0.56
VTI1A-204ENST00000480057 CARNS1A5YM72 827 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 ZSCAN5CA6NGD5 496 aaPredicted RBP11.52□□□□□ -0.57
VTI1A-204ENST00000480057 CLDN5O00501 218 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 LCP1P13796 627 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 ECHS1P30084 290 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 NOS2P35228 1153 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 TNNT3P45378 269 aaPredicted RBP11.52□□□□□ -0.57
VTI1A-204ENST00000480057 OR1G1P47890 313 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 GJA8P48165 433 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 TKTL1P51854 596 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 MAP3K7CLP57077 242 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 YWHAZP63104 245 aaKnown RBP11.52□□□□□ -0.57
VTI1A-204ENST00000480057 MRPS25P82663 173 aaKnown RBP11.52□□□□□ -0.57
VTI1A-204ENST00000480057 TLE2Q04725 743 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 ADIGQ0VDE8 80 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 PTK6Q13882 451 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 SLC25A52Q3SY17 297 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 ATP13A4Q4VNC1 1196 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 ALS2CLQ60I27 953 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 TXNRD3NBQ6F5E7 133 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 CNKSR3Q6P9H4 555 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 CYP4V2Q6ZWL3 525 aaPredicted RBP11.52□□□□□ -0.57
VTI1A-204ENST00000480057 SND1Q7KZF4 910 aaKnown RBP eCLIP11.52□□□□□ -0.57
VTI1A-204ENST00000480057 BNIPLQ7Z465 357 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 DCP1BQ8IZD4 617 aaKnown RBP11.52□□□□□ -0.57
VTI1A-204ENST00000480057 KCTD6Q8NC69 237 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 BBOF1Q8ND07 529 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 ZMIZ2Q8NF64 920 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 FAM172AQ8WUF8 416 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 IFT81Q8WYA0 676 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 NT5C3BQ969T7 300 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 LRRC45Q96CN5 670 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 FUBP3Q96I24 572 aaKnown RBP eCLIP11.52□□□□□ -0.57
VTI1A-204ENST00000480057 CFAP57Q96MR6 1250 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 CASD1Q96PB1 797 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 HERPUD2Q9BSE4 406 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 DMAP1Q9NPF5 467 aaPredicted RBP11.52□□□□□ -0.57
VTI1A-204ENST00000480057 WHRNQ9P202 907 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 STAP1Q9ULZ2 295 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 TIMM13Q9Y5L4 95 aaPredicted RBP11.52□□□□□ -0.57
VTI1A-204ENST00000480057 TTC3P53804 2025 aa11.52□□□□□ -0.57
VTI1A-204ENST00000480057 PATJQ8NI35 1801 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 PTPRDP23468 1912 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 ESYT3A0FGR9 886 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 OR6C75A6NL08 312 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 HHLA1C9JL84 531 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 PIK3R2O00459 728 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 DAPK3O43293 454 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 LIASO43766 372 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 TADA2AO75478 443 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 BEST1O76090 585 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 ALDH2P05091 517 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 HSPA9P38646 679 aaKnown RBP11.51□□□□□ -0.57
VTI1A-204ENST00000480057 AIF1P55008 147 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 HDAC4P56524 1084 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 DAOAP59103 153 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 CAV1Q03135 178 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 SMARCB1Q12824 385 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 TFDP2Q14188 446 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 MRPL58Q14197 206 aaKnown RBP11.51□□□□□ -0.57
VTI1A-204ENST00000480057 HLTFQ14527 1009 aaKnown RBP eCLIP11.51□□□□□ -0.57
VTI1A-204ENST00000480057 PPP1R7Q15435 360 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 TAF5Q15542 800 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 NFE2Q16621 373 aaPredicted RBP11.51□□□□□ -0.57
VTI1A-204ENST00000480057 C15orf59Q2T9L4 293 aaPredicted RBP11.51□□□□□ -0.57
VTI1A-204ENST00000480057 TRIM60Q495X7 471 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 PM20D1Q6GTS8 502 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 ANKS1BQ7Z6G8 1248 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 GSPT2Q8IYD1 628 aaKnown RBP11.51□□□□□ -0.57
VTI1A-204ENST00000480057 LRRC43Q8N309 656 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 CCDC89Q8N998 374 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 OR10T2Q8NGX3 314 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 C1orf54Q8WWF1 131 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 FAF2Q96CS3 445 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 PEBP4Q96S96 227 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 SLC9A7Q96T83 725 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 NPY6RQ99463 290 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 ZNF670Q9BS34 389 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 TRIM51Q9BSJ1 452 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 HEMGNQ9BXL5 484 aa11.51□□□□□ -0.57
VTI1A-204ENST00000480057 ZCWPW1Q9H0M4 648 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms