RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 CLDN5O00501 218 aa15.31■□□□□ 0.04
SMARCE1-209ENST00000478349 C4BPAP04003 597 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-209ENST00000478349 ZNF806P0C7X5 589 aa15.31■□□□□ 0.04
SMARCE1-209ENST00000478349 ADH5P11766 374 aa15.31■□□□□ 0.04
SMARCE1-209ENST00000478349 RAP1GAPP47736 663 aa15.31■□□□□ 0.04
SMARCE1-209ENST00000478349 DGKEP52429 567 aa15.31■□□□□ 0.04
SMARCE1-209ENST00000478349 LIMK1P53667 647 aa15.31■□□□□ 0.04
SMARCE1-209ENST00000478349 DHCR24Q15392 516 aa15.31■□□□□ 0.04
SMARCE1-209ENST00000478349 SNX30Q5VWJ9 437 aa15.31■□□□□ 0.04
SMARCE1-209ENST00000478349 TRMT11Q7Z4G4 463 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-209ENST00000478349 TTC39CQ8N584 583 aa15.31■□□□□ 0.04
SMARCE1-209ENST00000478349 SPRYD3Q8NCJ5 442 aa15.31■□□□□ 0.04
SMARCE1-209ENST00000478349 USP33Q8TEY7 942 aa15.31■□□□□ 0.04
SMARCE1-209ENST00000478349 PNKPQ96T60 521 aa15.31■□□□□ 0.04
SMARCE1-209ENST00000478349 DUSP9Q99956 384 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-209ENST00000478349 GZF1Q9H116 711 aaPredicted RBP15.31■□□□□ 0.04
SMARCE1-209ENST00000478349 LINC00597Q9H2U6 94 aa15.31■□□□□ 0.04
SMARCE1-209ENST00000478349 FBRSL1Q9HCM7 1045 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-209ENST00000478349 TLR8Q9NR97 1041 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-209ENST00000478349 VPS45Q9NRW7 570 aa15.31■□□□□ 0.04
SMARCE1-209ENST00000478349 TRAF3IP3Q9Y228 551 aa15.31■□□□□ 0.04
SMARCE1-209ENST00000478349 RHOBTB3O94955 611 aa15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 ASS1P00966 412 aaKnown RBP15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 FAM200BP0CF97 657 aa15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 NR2F2P24468 414 aa15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 GBP1P32455 592 aa15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 MPLP40238 635 aa15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 GRIA2P42262 883 aa15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 VAMP7P51809 220 aa15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 GAD2Q05329 585 aa15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 PKP1Q13835 747 aa15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 NFIL3Q16649 462 aa15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 SV2AQ7L0J3 742 aa15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 TADA2BQ86TJ2 420 aa15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 ACOT1Q86TX2 421 aa15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 KBTBD6Q86V97 674 aa15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 ADGRG2Q8IZP9 1017 aa15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 SPACA7Q96KW9 195 aa15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 CNOT6LQ96LI5 555 aaKnown RBP15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 RNF38Q9H0F5 515 aa15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 ARRDC1-AS1Q9H2J1 176 aa15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 CYP3A43Q9HB55 503 aa15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 POLMQ9NP87 494 aaPredicted RBP15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 MMP17Q9ULZ9 603 aa15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 HPSEQ9Y251 543 aa15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 FRYLO94915 3013 aa15.3■□□□□ 0.04
SMARCE1-209ENST00000478349 DCDC2BA2VCK2 349 aa15.29■□□□□ 0.04
SMARCE1-209ENST00000478349 ZBTB24O43167 697 aaPredicted RBP15.29■□□□□ 0.04
SMARCE1-209ENST00000478349 COCHO43405 550 aa15.29■□□□□ 0.04
SMARCE1-209ENST00000478349 STX10O60499 249 aa15.29■□□□□ 0.04
SMARCE1-209ENST00000478349 OPRD1P41143 372 aa15.29■□□□□ 0.04
SMARCE1-209ENST00000478349 NDST1P52848 882 aa15.29■□□□□ 0.04
SMARCE1-209ENST00000478349 CACNA2D1P54289 1103 aa15.29■□□□□ 0.04
SMARCE1-209ENST00000478349 CDH8P55286 799 aa15.29■□□□□ 0.04
SMARCE1-209ENST00000478349 SEC13P55735 322 aa15.29■□□□□ 0.04
SMARCE1-209ENST00000478349 BYSLQ13895 437 aaKnown RBP15.29■□□□□ 0.04
SMARCE1-209ENST00000478349 PLK5Q496M5 336 aa15.29■□□□□ 0.04
SMARCE1-209ENST00000478349 C2orf27AQ580R0 203 aa15.29■□□□□ 0.04
SMARCE1-209ENST00000478349 EOGTQ5NDL2 527 aa15.29■□□□□ 0.04
SMARCE1-209ENST00000478349 NAIF1Q69YI7 327 aaPredicted RBP15.29■□□□□ 0.04
SMARCE1-209ENST00000478349 CRYBG2Q8N1P7 616 aa15.29■□□□□ 0.04
SMARCE1-209ENST00000478349 GUF1Q8N442 669 aaKnown RBP15.29■□□□□ 0.04
SMARCE1-209ENST00000478349 PLEKHO2Q8TD55 490 aa15.29■□□□□ 0.04
SMARCE1-209ENST00000478349 SLC2A14Q8TDB8 520 aa15.29■□□□□ 0.04
SMARCE1-209ENST00000478349 KCNK16Q96T55 309 aa15.29■□□□□ 0.04
SMARCE1-209ENST00000478349 PNPLA8Q9NP80 782 aa15.29■□□□□ 0.04
SMARCE1-209ENST00000478349 ARHGEF4Q9NR80 690 aa15.29■□□□□ 0.04
SMARCE1-209ENST00000478349 LSM7Q9UK45 103 aaKnown RBP15.29■□□□□ 0.04
SMARCE1-209ENST00000478349 NME7Q9Y5B8 376 aa15.29■□□□□ 0.04
SMARCE1-209ENST00000478349 DMXL1Q9Y485 3027 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 A0A1W2PQ27 194 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 A0A1W2PQ64 194 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 A0A1W2PQD8 194 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 FAM92AA1XBS5 289 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 TLR5O60602 858 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 KAT7O95251 611 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 VNN1O95497 513 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 HLA-DRAP01903 254 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 PSMC2P35998 433 aaKnown RBP15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 DPP6P42658 865 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 TNFRSF4P43489 277 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 PPM1JQ5JR12 505 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 FAM186BQ8IYM0 893 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 FUKQ8N0W3 1084 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 KCNV2Q8TDN2 545 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 WHAMMQ8TF30 809 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 FAXDC2Q96IV6 333 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 CDK5RAP1Q96SZ6 601 aaKnown RBP15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 NT5C1AQ9BXI3 368 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 GTPBP4Q9BZE4 634 aaKnown RBP15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 NIF3L1Q9GZT8 377 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 FAM124BQ9H5Z6 455 aaPredicted RBP15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 CSNK1G1Q9HCP0 422 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.28■□□□□ 0.042e-6■■■■■ 161.5
SMARCE1-209ENST00000478349 TMEM30AQ9NV96 361 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 RMND1Q9NWS8 449 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 IL37Q9NZH6 218 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 GMIPQ9P107 970 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 PCDHA5Q9Y5H7 936 aa15.28■□□□□ 0.04
SMARCE1-209ENST00000478349 NCOR2Q9Y618 2525 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms