RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 CCDC84Q86UT8 332 aaPredicted RBP13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 SCYL3Q8IZE3 742 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 RASGEF1CQ8N431 466 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 NATD1Q8N6N6 113 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 EPS8L3Q8TE67 593 aaKnown RBP13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 U2AF1L4Q8WU68 220 aaKnown RBP13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 LENG9Q96B70 501 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 NSL1Q96IY1 281 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 ARMC7Q9H6L4 198 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 SPON1Q9HCB6 807 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 DDX56Q9NY93 547 aaKnown RBP13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 GPRC5DQ9NZD1 345 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 PARP2Q9UGN5 583 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 AMACRQ9UHK6 382 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 KIAA1024Q9UPX6 916 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 APOBEC2Q9Y235 224 aaKnown RBP13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 ACTL7BQ9Y614 415 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 BTNL10A8MVZ5 291 aa13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 ZNF701M0R085 212 aaPredicted RBP13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 KRIT1O00522 736 aa13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 CIB2O75838 187 aa13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 FTCDO95954 541 aa13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 PLEKP08567 350 aaPredicted RBP13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 CHKAP35790 457 aa13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 IST1P53990 364 aa13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 IGBP1P78318 339 aa13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 EHHADHQ08426 723 aa13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 STK4Q13043 487 aa13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 PDE1CQ14123 709 aaPredicted RBP13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 PTK2BQ14289 1009 aa13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 ANGEL2Q5VTE6 544 aaKnown RBP13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 DUPD1Q68J44 220 aa13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 DYMQ7RTS9 669 aa13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 ACTRT2Q8TDY3 377 aa13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 FAM172AQ8WUF8 416 aa13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 GJA10Q969M2 543 aa13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 CFAP57Q96MR6 1250 aa13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 CIB1Q99828 191 aa13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 WDR18Q9BV38 432 aa13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 C12orf4Q9NQ89 552 aa13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 NDFIP2Q9NV92 336 aa13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 PHTF1Q9UMS5 762 aa13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 RBMX2Q9Y388 322 aaKnown RBP13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 ASTN2O75129 1339 aaPredicted RBP13.16□□□□□ -0.3
RTFDC1-207ENST00000477573 FAM187AA6NFU0 413 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 SMCHD1A6NHR9 2005 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 FADS2P1A8MWK0 482 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 B8ZZF3 427 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 KCNK3O14649 394 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 MSH4O15457 936 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 TAL1P17542 331 aaPredicted RBP13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 POLR2CP19387 275 aaPredicted RBP13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 MUTP22033 750 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 RPA1P27694 616 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 ATN1P54259 1190 aaPredicted RBP13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 FOLH1Q04609 750 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 TJAP1Q5JTD0 557 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 CYP4V2Q6ZWL3 525 aaPredicted RBP13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 DHDDSQ86SQ9 333 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 BBOF1Q8ND07 529 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 SIAEQ9HAT2 523 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 MAP3K20Q9NYL2 800 aaKnown RBP13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 ZNF112Q9UJU3 913 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 DNM3Q9UQ16 869 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 NOC2LQ9Y3T9 749 aaKnown RBP13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 DICER1Q9UPY3 1922 aaKnown RBP13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 RPTORQ8N122 1335 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 POTEB3A0JP26 581 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 SNTNA6NMZ2 147 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 POTECB2RU33 542 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 SIN3BO75182 1162 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 PLA2G4BP0C869 781 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 KPNA1P52294 538 aaPredicted RBP13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 SPIRE1Q08AE8 756 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 DLG1Q12959 904 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 ECM1Q16610 540 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 TTI2Q6NXR4 508 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 POTEBQ6S5H4 581 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 KCNK18Q7Z418 384 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 GUF1Q8N442 669 aaKnown RBP13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 MINDY2Q8NBR6 621 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 GIMAP5Q96F15 307 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 KCNK9Q9NPC2 374 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 UBN1Q9NPG3 1134 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 TCF7L2Q9NQB0 619 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 HMGXB4Q9UGU5 601 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 CDH7Q9ULB5 785 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 TMCC3Q9ULS5 477 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 DIS3Q9Y2L1 958 aaKnown RBP13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 DOCK1Q14185 1865 aa13.15□□□□□ -0.3
RTFDC1-207ENST00000477573 TRIM49BA6NDI0 452 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 H3BSA7 217 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 KPNA4O00629 521 aaPredicted RBP13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 RIPK2O43353 540 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 COBLO75128 1261 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 ZNF254O75437 659 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 ZBTB11O95625 1053 aaPredicted RBP13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 TFPTP0C1Z6 253 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 FCER1AP12319 257 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms