RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 AP1G2O75843 785 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 FSBPO95073 299 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 NFICP08651 508 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 ABHD2P08910 425 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 SSTR1P30872 391 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 ICAM3P32942 547 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 FASTKD1Q53R41 847 aaKnown RBP15.18■□□□□ 0.02
HDAC6-220ENST00000477528 APBB2Q92870 758 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 ATP6V1E2Q96A05 226 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 NEUROG2Q9H2A3 272 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 ABHD16BQ9H3Z7 469 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 DHX33Q9H6R0 707 aaKnown RBP15.18■□□□□ 0.02
HDAC6-220ENST00000477528 SHOX2O60902 331 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-220ENST00000477528 SLC6A3Q01959 620 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 NAPEPLDQ6IQ20 393 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 OR6P1Q8NGX9 317 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 USP33Q8TEY7 942 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 EXT2Q93063 718 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 C20orf96Q9NUD7 363 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-220ENST00000477528 NDE1Q9NXR1 346 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 FAM53CQ9NYF3 392 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 AKAP11Q9UKA4 1901 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 C4AP0C0L4 1744 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 C4BP0C0L5 1744 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 E5RJQ4 531 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 F9P00740 461 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 CHRNB2P17787 502 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 TARSP26639 723 aaKnown RBP15.18■□□□□ 0.02
HDAC6-220ENST00000477528 CHKAP35790 457 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 ANO4Q32M45 955 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 PLEKHA7Q6IQ23 1121 aa15.18■□□□□ 0.02
HDAC6-220ENST00000477528 ARID3BQ8IVW6 561 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-220ENST00000477528 PPWD1Q96BP3 646 aaKnown RBP15.18■□□□□ 0.02
HDAC6-220ENST00000477528 FNDC3AQ9Y2H6 1198 aaKnown RBP15.18■□□□□ 0.02
HDAC6-220ENST00000477528 MAFBQ9Y5Q3 323 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-220ENST00000477528 DHX15O43143 795 aaKnown RBP15.17■□□□□ 0.02
HDAC6-220ENST00000477528 TOMM70O94826 608 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 FBXO21O94952 628 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 EPHB2P29323 1055 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 ADSSP30520 456 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 ARL2P36404 184 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 ZNF157P51786 506 aaPredicted RBP15.17■□□□□ 0.02
HDAC6-220ENST00000477528 HIC1Q14526 733 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 PKN2Q16513 984 aaKnown RBP15.17■□□□□ 0.02
HDAC6-220ENST00000477528 GRAMD1BQ3KR37 738 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 LBX2Q6XYB7 198 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 CTNNAL1Q9UBT7 734 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 ANGPTL3Q9Y5C1 460 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 ANKRD36CQ5JPF3 1778 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 CHEK2O96017 543 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 ITGAVP06756 1048 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 MMP8P22894 467 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 OCRLQ01968 901 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 DAB2IPQ5VWQ8 1189 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 CATSPERBQ9H7T0 1116 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 ZMYM2Q9UBW7 1377 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 hCG_1818297A0A087WSY0 165 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 TMEM191CA6NGB0 347 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 KLHL2O95198 593 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 CELF2O95319 508 aaKnown RBP15.17■□□□□ 0.02
HDAC6-220ENST00000477528 CNTFP26441 200 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 SERPINB4P48594 390 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 USP10Q14694 798 aaKnown RBP15.17■□□□□ 0.02
HDAC6-220ENST00000477528 TREML2Q5T2D2 321 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 ZFYVE28Q9HCC9 887 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 CPSF2Q9P2I0 782 aaKnown RBP15.17■□□□□ 0.02
HDAC6-220ENST00000477528 HEY2Q9UBP5 337 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 RPS6KL1Q9Y6S9 549 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 IRS2Q9Y4H2 1338 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 CYP4F11Q9HBI6 524 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 XPNPEP1Q9NQW7 623 aa15.17■□□□□ 0.02
HDAC6-220ENST00000477528 NHSL1Q5SYE7 1610 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 SMIM24O75264 130 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 GLRA3O75311 464 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 PEX19P40855 299 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 ADCYAP1R1P41586 468 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 ZNF143P52747 638 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-220ENST00000477528 HUNKP57058 714 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 DPYSL3Q14195 570 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 ZSWIM2Q8NEG5 633 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 CKAP2Q8WWK9 683 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 WDCPQ9H6R7 721 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 ODC1P11926 461 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 ACO1P21399 889 aaKnown RBP15.16■□□□□ 0.02
HDAC6-220ENST00000477528 AXLP30530 894 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 RGS2P41220 211 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 MAPRE1Q15691 268 aaKnown RBP15.16■□□□□ 0.02
HDAC6-220ENST00000477528 C4orf50Q6ZRC1 276 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 BBS12Q6ZW61 710 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 MON1BQ7L1V2 547 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 SCUBE3Q8IX30 993 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 PTPRN2Q92932 1015 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 C12orf42Q96LP6 360 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 B2RBV5 119 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 PYGBP11216 843 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 ETS1P14921 441 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 CPB1P15086 417 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 MMP13P45452 471 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 MDH1BQ5I0G3 518 aa15.16■□□□□ 0.02
HDAC6-220ENST00000477528 EEF1DP3Q658K8 133 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms