RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 CFHP08603 1231 aa17.78■□□□□ 0.44
EPHB4-204ENST00000477446 FAM200BP0CF97 657 aa17.78■□□□□ 0.44
EPHB4-204ENST00000477446 NAP1L1P55209 391 aaKnown RBP17.78■□□□□ 0.44
EPHB4-204ENST00000477446 MAP3K7CLP57077 242 aa17.78■□□□□ 0.44
EPHB4-204ENST00000477446 SKIV2LQ15477 1246 aaKnown RBP17.78■□□□□ 0.44
EPHB4-204ENST00000477446 SDHAF4Q5VUM1 108 aa17.78■□□□□ 0.44
EPHB4-204ENST00000477446 CCDC70Q6NSX1 233 aa17.78■□□□□ 0.44
EPHB4-204ENST00000477446 ALKBH5Q6P6C2 394 aaKnown RBP17.78■□□□□ 0.44
EPHB4-204ENST00000477446 SYCE2Q6PIF2 218 aa17.78■□□□□ 0.44
EPHB4-204ENST00000477446 CLEC20AQ6ZU45 233 aa17.78■□□□□ 0.44
EPHB4-204ENST00000477446 NOP9Q86U38 636 aaKnown RBP17.78■□□□□ 0.44
EPHB4-204ENST00000477446 ZMIZ2Q8NF64 920 aa17.78■□□□□ 0.44
EPHB4-204ENST00000477446 UBA3Q8TBC4 463 aa17.78■□□□□ 0.44
EPHB4-204ENST00000477446 FEZF2Q8TBJ5 459 aa17.78■□□□□ 0.44
EPHB4-204ENST00000477446 GPR152Q8TDT2 470 aa17.78■□□□□ 0.44
EPHB4-204ENST00000477446 DDX1Q92499 740 aaKnown RBP17.78■□□□□ 0.44
EPHB4-204ENST00000477446 CALR3Q96L12 384 aaKnown RBP17.78■□□□□ 0.44
EPHB4-204ENST00000477446 SFXN1Q9H9B4 322 aa17.78■□□□□ 0.44
EPHB4-204ENST00000477446 CSNK1G1Q9HCP0 422 aa17.78■□□□□ 0.44
EPHB4-204ENST00000477446 HESX1Q9UBX0 185 aa17.78■□□□□ 0.44
EPHB4-204ENST00000477446 CCDC195A0A1B0GUA6 201 aa17.77■□□□□ 0.44
EPHB4-204ENST00000477446 TARSL2A2RTX5 802 aaKnown RBP17.77■□□□□ 0.44
EPHB4-204ENST00000477446 LRG1P02750 347 aa17.77■□□□□ 0.44
EPHB4-204ENST00000477446 HNRNPA1P09651 372 aaKnown RBP eCLIP17.77■□□□□ 0.44
EPHB4-204ENST00000477446 NPR3P17342 541 aa17.77■□□□□ 0.44
EPHB4-204ENST00000477446 HOXA9P31269 272 aa17.77■□□□□ 0.44
EPHB4-204ENST00000477446 PDE6CP51160 858 aa17.77■□□□□ 0.44
EPHB4-204ENST00000477446 RPL10AP62906 217 aaKnown RBP17.77■□□□□ 0.44
EPHB4-204ENST00000477446 PKDCCQ504Y2 493 aa17.77■□□□□ 0.44
EPHB4-204ENST00000477446 C8orf48Q96LL4 319 aa17.77■□□□□ 0.44
EPHB4-204ENST00000477446 DMAP1Q9NPF5 467 aaPredicted RBP17.77■□□□□ 0.44
EPHB4-204ENST00000477446 NOCTQ9UK39 431 aaKnown RBP17.77■□□□□ 0.44
EPHB4-204ENST00000477446 NENFQ9UMX5 172 aa17.77■□□□□ 0.44
EPHB4-204ENST00000477446 GREB1Q4ZG55 1949 aa17.76■□□□□ 0.43
EPHB4-204ENST00000477446 M0QYV0 167 aa17.76■□□□□ 0.43
EPHB4-204ENST00000477446 TRIM66O15016 1216 aa17.76■□□□□ 0.43
EPHB4-204ENST00000477446 CCL16O15467 120 aa17.76■□□□□ 0.43
EPHB4-204ENST00000477446 H2AFZP0C0S5 128 aa17.76■□□□□ 0.43
EPHB4-204ENST00000477446 PAFAH1B1P43034 410 aa17.76■□□□□ 0.43
EPHB4-204ENST00000477446 BCAT1P54687 386 aa17.76■□□□□ 0.43
EPHB4-204ENST00000477446 EPHB3P54753 998 aa17.76■□□□□ 0.43
EPHB4-204ENST00000477446 PLD1Q13393 1074 aa17.76■□□□□ 0.43
EPHB4-204ENST00000477446 TAF3Q5VWG9 929 aa17.76■□□□□ 0.43
EPHB4-204ENST00000477446 CC2D1AQ6P1N0 951 aaPredicted RBP17.76■□□□□ 0.43
EPHB4-204ENST00000477446 WDR93Q6P2C0 686 aa17.76■□□□□ 0.43
EPHB4-204ENST00000477446 TMC5Q6UXY8 1006 aa17.76■□□□□ 0.43
EPHB4-204ENST00000477446 H2AFVQ71UI9 128 aa17.76■□□□□ 0.43
EPHB4-204ENST00000477446 STKLD1Q8NE28 680 aa17.76■□□□□ 0.43
EPHB4-204ENST00000477446 MAFAQ8NHW3 353 aaPredicted RBP17.76■□□□□ 0.43
EPHB4-204ENST00000477446 GIPC2Q8TF65 315 aa17.76■□□□□ 0.43
EPHB4-204ENST00000477446 SLC20A1Q8WUM9 679 aa17.76■□□□□ 0.43
EPHB4-204ENST00000477446 UBE2Q2Q8WVN8 375 aa17.76■□□□□ 0.43
EPHB4-204ENST00000477446 RUBCNQ92622 972 aa17.76■□□□□ 0.43
EPHB4-204ENST00000477446 ZNF707Q96C28 371 aaPredicted RBP17.76■□□□□ 0.43
EPHB4-204ENST00000477446 APOL5Q9BWW9 433 aa17.76■□□□□ 0.43
EPHB4-204ENST00000477446 PRKD2Q9BZL6 878 aa17.76■□□□□ 0.43
EPHB4-204ENST00000477446 ANKZF1Q9H8Y5 726 aa17.76■□□□□ 0.43
EPHB4-204ENST00000477446 PCDHGC3Q9UN70 934 aa17.76■□□□□ 0.43
EPHB4-204ENST00000477446 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.75■□□□□ 0.43
EPHB4-204ENST00000477446 PAPLNO95428 1278 aa17.75■□□□□ 0.43
EPHB4-204ENST00000477446 HOXB8P17481 243 aaPredicted RBP17.75■□□□□ 0.43
EPHB4-204ENST00000477446 PDE4CQ08493 712 aa17.75■□□□□ 0.43
EPHB4-204ENST00000477446 BST2Q10589 180 aaKnown RBP17.75■□□□□ 0.43
EPHB4-204ENST00000477446 RARS2Q5T160 578 aaKnown RBP17.75■□□□□ 0.43
EPHB4-204ENST00000477446 DENND1BQ6P3S1 775 aa17.75■□□□□ 0.43
EPHB4-204ENST00000477446 KRT222Q8N1A0 295 aa17.75■□□□□ 0.43
EPHB4-204ENST00000477446 CMASQ8NFW8 434 aaPredicted RBP17.75■□□□□ 0.43
EPHB4-204ENST00000477446 PATJQ8NI35 1801 aa17.75■□□□□ 0.43
EPHB4-204ENST00000477446 MSLNLQ96KJ4 702 aa17.75■□□□□ 0.43
EPHB4-204ENST00000477446 SPATA17Q96L03 361 aa17.75■□□□□ 0.43
EPHB4-204ENST00000477446 OSBPL9Q96SU4 736 aa17.75■□□□□ 0.43
EPHB4-204ENST00000477446 BRWD1Q9NSI6 2320 aa17.75■□□□□ 0.43
EPHB4-204ENST00000477446 ZNF446Q9NWS9 450 aa17.75■□□□□ 0.43
EPHB4-204ENST00000477446 C2orf16Q68DN1 1984 aa17.75■□□□□ 0.43
EPHB4-204ENST00000477446 HHLA1C9JL84 531 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 TULP2O00295 520 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 CES2O00748 559 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 MMEP08473 750 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 CHRNB2P17787 502 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 GPD2P43304 727 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 SLC8A3P57103 927 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 CDR2Q01850 454 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 GLIPR1L2Q4G1C9 344 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 ZNF677Q86XU0 584 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 CREG2Q8IUH2 290 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 SLC30A5Q8TAD4 765 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 S1PR5Q9H228 398 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 UBE2ZQ9H832 354 aaPredicted RBP17.74■□□□□ 0.43
EPHB4-204ENST00000477446 SALL4Q9UJQ4 1053 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 DOCK6Q96HP0 2047 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 TNFRSF10BO14763 440 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 XPO1O14980 1071 aaKnown RBP17.74■□□□□ 0.43
EPHB4-204ENST00000477446 SRGAP2O75044 1071 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 XYLBO75191 536 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 SETSIPP0DME0 302 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 FMO1Q01740 532 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 MTMR3Q13615 1198 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 VEPH1Q14D04 833 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 DNAJB7Q7Z6W7 309 aaPredicted RBP17.74■□□□□ 0.43
EPHB4-204ENST00000477446 PASD1Q8IV76 773 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms