RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 SPTA1P02549 2419 aa12.15□□□□□ -0.47
BRCA1-213ENST00000476777 IGHV1OR15-9A0A0B4J2B8 117 aa12.14□□□□□ -0.47
BRCA1-213ENST00000476777 A0A1W2PQD8 194 aa12.14□□□□□ -0.47
BRCA1-213ENST00000476777 TBC1D3BA6NDS4 549 aa12.14□□□□□ -0.47
BRCA1-213ENST00000476777 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.14□□□□□ -0.47
BRCA1-213ENST00000476777 PPP1R37O75864 691 aa12.14□□□□□ -0.47
BRCA1-213ENST00000476777 OAS1P00973 400 aaKnown RBP12.14□□□□□ -0.47
BRCA1-213ENST00000476777 SYPP08247 313 aa12.14□□□□□ -0.47
BRCA1-213ENST00000476777 BDNFP23560 247 aa12.14□□□□□ -0.47
BRCA1-213ENST00000476777 LMO2P25791 158 aa12.14□□□□□ -0.47
BRCA1-213ENST00000476777 GRIK1P39086 918 aa12.14□□□□□ -0.47
BRCA1-213ENST00000476777 PPP3CCP48454 512 aa12.14□□□□□ -0.47
BRCA1-213ENST00000476777 PSMC1P62191 440 aaKnown RBP12.14□□□□□ -0.47
BRCA1-213ENST00000476777 LY6G5CQ5SRR4 150 aa12.14□□□□□ -0.47
BRCA1-213ENST00000476777 LIMS2Q7Z4I7 341 aa12.14□□□□□ -0.47
BRCA1-213ENST00000476777 ETFBKMTQ8IXQ9 262 aa12.14□□□□□ -0.47
BRCA1-213ENST00000476777 CACTINQ8WUQ7 758 aaKnown RBP12.14□□□□□ -0.47
BRCA1-213ENST00000476777 KBTBD7Q8WVZ9 684 aa12.14□□□□□ -0.47
BRCA1-213ENST00000476777 RAD54LQ92698 747 aa12.14□□□□□ -0.47
BRCA1-213ENST00000476777 MYLPFQ96A32 169 aa12.14□□□□□ -0.47
BRCA1-213ENST00000476777 CALML4Q96GE6 196 aa12.14□□□□□ -0.47
BRCA1-213ENST00000476777 SYT15Q9BQS2 421 aa12.14□□□□□ -0.47
BRCA1-213ENST00000476777 STRA6Q9BX79 667 aa12.14□□□□□ -0.47
BRCA1-213ENST00000476777 CRTAC1Q9NQ79 661 aa12.14□□□□□ -0.47
BRCA1-213ENST00000476777 ITGA11Q9UKX5 1188 aa12.14□□□□□ -0.47
BRCA1-213ENST00000476777 PCDHB9Q9Y5E1 797 aa12.14□□□□□ -0.47
BRCA1-213ENST00000476777 PTPRBP23467 1997 aa12.14□□□□□ -0.47
BRCA1-213ENST00000476777 A0A1W2PQF6 199 aa12.13□□□□□ -0.47
BRCA1-213ENST00000476777 TULP1O00294 542 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-213ENST00000476777 KRT19P08727 400 aa12.13□□□□□ -0.47
BRCA1-213ENST00000476777 UBA7P41226 1012 aa12.13□□□□□ -0.47
BRCA1-213ENST00000476777 NOP14P78316 857 aaKnown RBP12.13□□□□□ -0.47
BRCA1-213ENST00000476777 RBP5P82980 135 aa12.13□□□□□ -0.47
BRCA1-213ENST00000476777 KCNA1Q09470 495 aa12.13□□□□□ -0.47
BRCA1-213ENST00000476777 MCTP1Q6DN14 999 aa12.13□□□□□ -0.47
BRCA1-213ENST00000476777 MIB1Q86YT6 1006 aa12.13□□□□□ -0.47
BRCA1-213ENST00000476777 NAXDQ8IW45 347 aa12.13□□□□□ -0.47
BRCA1-213ENST00000476777 ZNF513Q8N8E2 541 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-213ENST00000476777 TRIML1Q8N9V2 468 aa12.13□□□□□ -0.47
BRCA1-213ENST00000476777 MDM1Q8TC05 714 aa12.13□□□□□ -0.47
BRCA1-213ENST00000476777 HNRNPLLQ8WVV9 542 aaKnown RBP12.13□□□□□ -0.47
BRCA1-213ENST00000476777 SAAL1Q96ER3 474 aa12.13□□□□□ -0.47
BRCA1-213ENST00000476777 ZSCAN31Q96LW9 406 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-213ENST00000476777 AK8Q96MA6 479 aa12.13□□□□□ -0.47
BRCA1-213ENST00000476777 HSPA12BQ96MM6 686 aa12.13□□□□□ -0.47
BRCA1-213ENST00000476777 CD248Q9HCU0 757 aa12.13□□□□□ -0.47
BRCA1-213ENST00000476777 TBC1D14Q9P2M4 693 aa12.13□□□□□ -0.47
BRCA1-213ENST00000476777 CDH9Q9ULB4 789 aa12.13□□□□□ -0.47
BRCA1-213ENST00000476777 RAXQ9Y2V3 346 aa12.13□□□□□ -0.47
BRCA1-213ENST00000476777 TENM4Q6N022 2769 aa12.13□□□□□ -0.47
BRCA1-213ENST00000476777 MGAQ8IWI9 3026 aa12.13□□□□□ -0.47
BRCA1-213ENST00000476777 F8VP50 259 aa12.12□□□□□ -0.47
BRCA1-213ENST00000476777 TRIM66O15016 1216 aa12.12□□□□□ -0.47
BRCA1-213ENST00000476777 CBFA2T3O75081 653 aa12.12□□□□□ -0.47
BRCA1-213ENST00000476777 ZNF217O75362 1048 aa12.12□□□□□ -0.47
BRCA1-213ENST00000476777 TULP3O75386 442 aa12.12□□□□□ -0.47
BRCA1-213ENST00000476777 ZIC2O95409 532 aaPredicted RBP12.12□□□□□ -0.47
BRCA1-213ENST00000476777 ABL1P00519 1130 aa12.12□□□□□ -0.47
BRCA1-213ENST00000476777 MBL2P11226 248 aaPredicted RBP12.12□□□□□ -0.47
BRCA1-213ENST00000476777 HOXB2P14652 356 aa12.12□□□□□ -0.47
BRCA1-213ENST00000476777 ANXA13P27216 316 aa12.12□□□□□ -0.47
BRCA1-213ENST00000476777 GAD2Q05329 585 aa12.12□□□□□ -0.47
BRCA1-213ENST00000476777 TAF10Q12962 218 aa12.12□□□□□ -0.47
BRCA1-213ENST00000476777 MAPRE1Q15691 268 aaKnown RBP12.12□□□□□ -0.47
BRCA1-213ENST00000476777 PLEKHG6Q3KR16 790 aa12.12□□□□□ -0.47
BRCA1-213ENST00000476777 DPH6Q7L8W6 267 aa12.12□□□□□ -0.47
BRCA1-213ENST00000476777 TRMT11Q7Z4G4 463 aaKnown RBP12.12□□□□□ -0.47
BRCA1-213ENST00000476777 SLCO6A1Q86UG4 719 aa12.12□□□□□ -0.47
BRCA1-213ENST00000476777 SFR1Q86XK3 245 aa12.12□□□□□ -0.47
BRCA1-213ENST00000476777 DDX42Q86XP3 938 aaKnown RBP eCLIP12.12□□□□□ -0.47
BRCA1-213ENST00000476777 NAT16Q8N8M0 369 aa12.12□□□□□ -0.47
BRCA1-213ENST00000476777 HVCN1Q96D96 273 aa12.12□□□□□ -0.47
BRCA1-213ENST00000476777 PCED1BQ96HM7 432 aa12.12□□□□□ -0.47
BRCA1-213ENST00000476777 ZNF419Q96HQ0 510 aaPredicted RBP12.12□□□□□ -0.47
BRCA1-213ENST00000476777 ZFRQ96KR1 1074 aaKnown RBP12.12□□□□□ -0.47
BRCA1-213ENST00000476777 MTMR12Q9C0I1 747 aa12.12□□□□□ -0.47
BRCA1-213ENST00000476777 PDE11AQ9HCR9 933 aa12.12□□□□□ -0.47
BRCA1-213ENST00000476777 SCUBE2Q9NQ36 999 aa12.12□□□□□ -0.47
BRCA1-213ENST00000476777 RBAKQ9NYW8 714 aaPredicted RBP12.12□□□□□ -0.47
BRCA1-213ENST00000476777 EHD2Q9NZN4 543 aa12.12□□□□□ -0.47
BRCA1-213ENST00000476777 E2F8A0AVK6 867 aa12.11□□□□□ -0.47
BRCA1-213ENST00000476777 TRIM24O15164 1050 aa12.11□□□□□ -0.47
BRCA1-213ENST00000476777 HOXC11O43248 304 aaPredicted RBP12.11□□□□□ -0.47
BRCA1-213ENST00000476777 PDGFRBP09619 1106 aa12.11□□□□□ -0.47
BRCA1-213ENST00000476777 NDUFV2P19404 249 aa12.11□□□□□ -0.47
BRCA1-213ENST00000476777 NTSR1P30989 418 aa12.11□□□□□ -0.47
BRCA1-213ENST00000476777 WASP42768 502 aa12.11□□□□□ -0.47
BRCA1-213ENST00000476777 CYP27A1Q02318 531 aa12.11□□□□□ -0.47
BRCA1-213ENST00000476777 C10orf76Q5T2E6 689 aa12.11□□□□□ -0.47
BRCA1-213ENST00000476777 TOGARAM2Q6ZUX3 1019 aa12.11□□□□□ -0.47
BRCA1-213ENST00000476777 GLRX5Q86SX6 157 aa12.11□□□□□ -0.47
BRCA1-213ENST00000476777 KRI1Q8N9T8 703 aaKnown RBP12.11□□□□□ -0.47
BRCA1-213ENST00000476777 TERB1Q8NA31 727 aa12.11□□□□□ -0.47
BRCA1-213ENST00000476777 MYCBPAPQ8TBZ2 947 aa12.11□□□□□ -0.47
BRCA1-213ENST00000476777 LARP4BQ92615 738 aaKnown RBP12.11□□□□□ -0.47
BRCA1-213ENST00000476777 OTUB2Q96DC9 234 aa12.11□□□□□ -0.47
BRCA1-213ENST00000476777 HPDLQ96IR7 371 aa12.11□□□□□ -0.47
BRCA1-213ENST00000476777 LRIG1Q96JA1 1093 aa12.11□□□□□ -0.47
BRCA1-213ENST00000476777 C8orf48Q96LL4 319 aa12.11□□□□□ -0.47
BRCA1-213ENST00000476777 FAM124BQ9H5Z6 455 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms