RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 SSU72Q9NP77 194 aaKnown RBP17.2■□□□□ 0.34
TMEM53-208ENST00000476724 HAUS2Q9NVX0 235 aa17.2■□□□□ 0.34
TMEM53-208ENST00000476724 SAE1Q9UBE0 346 aaPredicted RBP17.2■□□□□ 0.34
TMEM53-208ENST00000476724 PCSK1NQ9UHG2 260 aa17.2■□□□□ 0.34
TMEM53-208ENST00000476724 ZMYND8Q9ULU4 1186 aaPredicted RBP17.2■□□□□ 0.34
TMEM53-208ENST00000476724 A0A1B0GUA9 196 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 MBLAC1A4D2B0 266 aaPredicted RBP17.19■□□□□ 0.34
TMEM53-208ENST00000476724 CFAP73A6NFT4 308 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 FOXO6A8MYZ6 492 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 TREHO43280 583 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 TSPAN1O60635 241 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 C6orf222P0C671 652 aaPredicted RBP17.19■□□□□ 0.34
TMEM53-208ENST00000476724 CYP2C9P11712 490 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 EIF3EP60228 445 aaKnown RBP17.19■□□□□ 0.34
TMEM53-208ENST00000476724 PURAQ00577 322 aaKnown RBP17.19■□□□□ 0.34
TMEM53-208ENST00000476724 ORC1Q13415 861 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 SPARCL1Q14515 664 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 MTFR1Q15390 333 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 RGS9BPQ6ZS82 235 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 APBB1IPQ7Z5R6 666 aaPredicted RBP17.19■□□□□ 0.34
TMEM53-208ENST00000476724 TMEM130Q8N3G9 435 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 DENND1AQ8TEH3 1009 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 NCAPGQ9BPX3 1015 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 ADAMTS10Q9H324 1103 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 MLXIPLQ9NP71 852 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 PRKAG3Q9UGI9 489 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 DUSP11O75319 330 aaKnown RBP17.19■□□□□ 0.34
TMEM53-208ENST00000476724 GPR32O75388 356 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 ASMTLO95671 621 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 NDST1P52848 882 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 GDF10P55107 478 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 KLHL38Q2WGJ6 581 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 CYB5D1Q6P9G0 228 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 ZNF410Q86VK4 478 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 MAP7D3Q8IWC1 876 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 PDIK1LQ8N165 341 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 HSPH1Q92598 858 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.19■□□□□ 0.34
TMEM53-208ENST00000476724 DERAQ9Y315 318 aa17.19■□□□□ 0.34
TMEM53-208ENST00000476724 CASP8AP2Q9UKL3 1982 aa17.18■□□□□ 0.34
TMEM53-208ENST00000476724 CITO14578 2027 aa17.18■□□□□ 0.34
TMEM53-208ENST00000476724 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.18■□□□□ 0.34
TMEM53-208ENST00000476724 SMIM35A0A1B0GVV1 85 aa17.18■□□□□ 0.34
TMEM53-208ENST00000476724 C2CD4BA6NLJ0 364 aa17.18■□□□□ 0.34
TMEM53-208ENST00000476724 PGK1P00558 417 aa17.18■□□□□ 0.34
TMEM53-208ENST00000476724 CD48P09326 243 aa17.18■□□□□ 0.34
TMEM53-208ENST00000476724 RBP3P10745 1247 aa17.18■□□□□ 0.34
TMEM53-208ENST00000476724 ATP2A2P16615 1042 aaKnown RBP17.18■□□□□ 0.34
TMEM53-208ENST00000476724 TAC1P20366 129 aa17.18■□□□□ 0.34
TMEM53-208ENST00000476724 GRM5P41594 1212 aa17.18■□□□□ 0.34
TMEM53-208ENST00000476724 WDR4P57081 412 aaKnown RBP17.18■□□□□ 0.34
TMEM53-208ENST00000476724 SNX16P57768 344 aa17.18■□□□□ 0.34
TMEM53-208ENST00000476724 PKN2Q16513 984 aaKnown RBP17.18■□□□□ 0.34
TMEM53-208ENST00000476724 MFSD14CQ5VZR4 134 aa17.18■□□□□ 0.34
TMEM53-208ENST00000476724 RNF43Q68DV7 783 aa17.18■□□□□ 0.34
TMEM53-208ENST00000476724 UBA3Q8TBC4 463 aa17.18■□□□□ 0.34
TMEM53-208ENST00000476724 DNAJB3Q8WWF6 145 aa17.18■□□□□ 0.34
TMEM53-208ENST00000476724 CALN1Q9BXU9 219 aa17.18■□□□□ 0.34
TMEM53-208ENST00000476724 PITPNM3Q9BZ71 974 aa17.18■□□□□ 0.34
TMEM53-208ENST00000476724 PLEKHA5Q9HAU0 1116 aa17.18■□□□□ 0.34
TMEM53-208ENST00000476724 RNF186Q9NXI6 227 aa17.18■□□□□ 0.34
TMEM53-208ENST00000476724 KLHL14Q9P2G3 628 aa17.18■□□□□ 0.34
TMEM53-208ENST00000476724 RABGEF1Q9UJ41 708 aa17.18■□□□□ 0.34
TMEM53-208ENST00000476724 PDGFRAP16234 1089 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 DESP17661 470 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 MNAT1P51948 309 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 GPX6P59796 221 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 SP3Q02447 781 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 CACNB2Q08289 660 aaPredicted RBP17.17■□□□□ 0.34
TMEM53-208ENST00000476724 PDK2Q15119 407 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 NOMO1Q15155 1222 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 DCAF4L1Q3SXM0 396 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 BOLA3Q53S33 107 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 SWT1Q5T5J6 900 aaKnown RBP17.17■□□□□ 0.34
TMEM53-208ENST00000476724 OR6B2Q6IFH4 312 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 VSIG1Q86XK7 387 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 UNC45BQ8IWX7 931 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 SPATA18Q8TC71 538 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 OSMRQ99650 979 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 TSPAN16Q9UKR8 245 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 BRCA2P51587 3418 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 PRPSAP2O60256 369 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 SETSIPP0DME0 302 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 ELNP15502 786 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 GJA9P57773 515 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 CBLBQ13191 982 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 DPYSL3Q14195 570 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 GALNTL6Q49A17 601 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 HP1BP3Q5SSJ5 553 aaPredicted RBP17.17■□□□□ 0.34
TMEM53-208ENST00000476724 ADGRD1Q6QNK2 874 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 C3orf62Q6ZUJ4 267 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 PARP9Q8IXQ6 854 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 PALM2Q8IXS6 379 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 RXFP2Q8WXD0 754 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 ACSS3Q9H6R3 686 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 RXFP1Q9HBX9 757 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 ABCF3Q9NUQ8 709 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 STARD13Q9Y3M8 1113 aa17.17■□□□□ 0.34
TMEM53-208ENST00000476724 TRIP11Q15643 1979 aa17.16■□□□□ 0.34
TMEM53-208ENST00000476724 GOLGA8MH3BSY2 632 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms