RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 SIGLEC14Q08ET2 396 aa8.56□□□□□ -1.04
CHD6-207ENST00000476641 ELAVL2Q12926 359 aaKnown RBP8.56□□□□□ -1.04
CHD6-207ENST00000476641 MRPL58Q14197 206 aaKnown RBP8.56□□□□□ -1.04
CHD6-207ENST00000476641 PPM1LQ5SGD2 360 aa8.56□□□□□ -1.04
CHD6-207ENST00000476641 LIN9Q5TKA1 542 aa8.56□□□□□ -1.04
CHD6-207ENST00000476641 ADALQ6DHV7 355 aa8.56□□□□□ -1.04
CHD6-207ENST00000476641 CCDC73Q6ZRK6 1079 aa8.56□□□□□ -1.04
CHD6-207ENST00000476641 C1QL4Q86Z23 238 aa8.56□□□□□ -1.04
CHD6-207ENST00000476641 EFCAB13Q8IY85 973 aa8.56□□□□□ -1.04
CHD6-207ENST00000476641 LRRC56Q8IYG6 542 aaPredicted RBP8.56□□□□□ -1.04
CHD6-207ENST00000476641 GPR65Q8IYL9 337 aa8.56□□□□□ -1.04
CHD6-207ENST00000476641 ZSCAN18Q8TBC5 510 aaPredicted RBP8.56□□□□□ -1.04
CHD6-207ENST00000476641 ING5Q8WYH8 240 aa8.56□□□□□ -1.04
CHD6-207ENST00000476641 TMEM209Q96SK2 561 aa8.56□□□□□ -1.04
CHD6-207ENST00000476641 CBWD1Q9BRT8 395 aa8.56□□□□□ -1.04
CHD6-207ENST00000476641 RPP25Q9BUL9 199 aaKnown RBP8.56□□□□□ -1.04
CHD6-207ENST00000476641 BLZF1Q9H2G9 400 aa8.56□□□□□ -1.04
CHD6-207ENST00000476641 PLEKHA4Q9H4M7 779 aa8.56□□□□□ -1.04
CHD6-207ENST00000476641 MRPL44Q9H9J2 332 aaKnown RBP8.56□□□□□ -1.04
CHD6-207ENST00000476641 RPF1Q9H9Y2 349 aaKnown RBP8.56□□□□□ -1.04
CHD6-207ENST00000476641 KCNK12Q9HB15 430 aa8.56□□□□□ -1.04
CHD6-207ENST00000476641 PANK4Q9NVE7 773 aa8.56□□□□□ -1.04
CHD6-207ENST00000476641 ZDHHC7Q9NXF8 308 aa8.56□□□□□ -1.04
CHD6-207ENST00000476641 DNMT3BQ9UBC3 853 aaKnown RBP8.56□□□□□ -1.04
CHD6-207ENST00000476641 FBXL5Q9UKA1 691 aa8.56□□□□□ -1.04
CHD6-207ENST00000476641 PCDHA7Q9UN72 937 aa8.56□□□□□ -1.04
CHD6-207ENST00000476641 BACE2Q9Y5Z0 518 aa8.56□□□□□ -1.04
CHD6-207ENST00000476641 MORC2Q9Y6X9 1032 aaPredicted RBP8.56□□□□□ -1.04
CHD6-207ENST00000476641 WDR87Q6ZQQ6 2873 aa8.56□□□□□ -1.04
CHD6-207ENST00000476641 FRMD3A2A2Y4 597 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 H0YCG3 227 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 PPP6R2O75170 966 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 SOAT2O75908 522 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 YEATS4O95619 227 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 ADRB2P07550 413 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 LRPAP1P30533 357 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 RPL9P32969 192 aaKnown RBP8.55□□□□□ -1.04
CHD6-207ENST00000476641 HOXD13P35453 343 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 CREMQ03060 361 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 SLC5A9Q2M3M2 681 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 CTXN3Q4LDR2 81 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 L1TD1Q5T7N2 865 aaKnown RBP8.55□□□□□ -1.04
CHD6-207ENST00000476641 FYB2Q5VWT5 728 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 SLC8B1Q6J4K2 584 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 LCNL1Q6ZST4 164 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 ANKS3Q6ZW76 656 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 OTOP3Q7RTS5 596 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 TTC9BQ8N6N2 239 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 PRSS33Q8NF86 280 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 NOC3LQ8WTT2 800 aaKnown RBP8.55□□□□□ -1.04
CHD6-207ENST00000476641 POMGNT1Q8WZA1 660 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 CCDC74AQ96AQ1 378 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 ZNF396Q96N95 335 aaPredicted RBP8.55□□□□□ -1.04
CHD6-207ENST00000476641 PGLYRP2Q96PD5 576 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 FAM213AQ9BRX8 229 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 ST6GALNAC4Q9H4F1 302 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 PCIF1Q9H4Z3 704 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 PLEKHA5Q9HAU0 1116 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 AGO2Q9UKV8 859 aaKnown RBP8.55□□□□□ -1.04
CHD6-207ENST00000476641 UBQLN1Q9UMX0 589 aaKnown RBP8.55□□□□□ -1.04
CHD6-207ENST00000476641 SORCS3Q9UPU3 1222 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 USTQ9Y2C2 406 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 STYXL1Q9Y6J8 313 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 DOCK8Q8NF50 2099 aa8.55□□□□□ -1.04
CHD6-207ENST00000476641 DMDP11532 3685 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 VPS13AQ96RL7 3174 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 MYH11P35749 1972 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 DENND4AQ7Z401 1863 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 SYN3O14994 580 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 POLR2DO15514 142 aaKnown RBP8.54□□□□□ -1.04
CHD6-207ENST00000476641 TRAPPC3O43617 180 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 ICMTO60725 284 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 CUTAO60888 179 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 CEBPBP17676 345 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 GAP43P17677 238 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 PLA2G5P39877 138 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 CCR2P41597 374 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 ME1P48163 572 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 AARSP49588 968 aaKnown RBP eCLIP8.54□□□□□ -1.04
CHD6-207ENST00000476641 TMEM132DQ14C87 1099 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 SPATA1Q5VX52 437 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 C9orf57Q5W0N0 161 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 LMBRD2Q68DH5 695 aaPredicted RBP8.54□□□□□ -1.04
CHD6-207ENST00000476641 PARM1Q6UWI2 310 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 SYDE1Q6ZW31 735 aaPredicted RBP8.54□□□□□ -1.04
CHD6-207ENST00000476641 PDZD3Q86UT5 571 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 SPACA3Q8IXA5 215 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 OR10T2Q8NGX3 314 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 HDAC7Q8WUI4 952 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 ACSF2Q96CM8 615 aaPredicted RBP8.54□□□□□ -1.04
CHD6-207ENST00000476641 TCEAL4Q96EI5 215 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 ACCSQ96QU6 501 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 KRTAP4-5Q9BYR2 181 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 TRIM9Q9C026 710 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 CYP4F11Q9HBI6 524 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 KBTBD4Q9NVX7 518 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 EPS15L1Q9UBC2 864 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 GPN3Q9UHW5 284 aaPredicted RBP8.54□□□□□ -1.04
CHD6-207ENST00000476641 KCNG1Q9UIX4 513 aa8.54□□□□□ -1.04
CHD6-207ENST00000476641 NUMBLQ9Y6R0 609 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms