RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 PLIN5Q00G26 463 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 GALNT2Q10471 571 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 FSTL1Q12841 308 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 WTAPQ15007 396 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 GPR68Q15743 365 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 PKN1Q16512 942 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 BTBD16Q32M84 506 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 NOMO2Q5JPE7 1267 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 FAXCQ5TGI0 409 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 RAP1GAP2Q684P5 730 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 NFRKBQ6P4R8 1299 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 DRICH1Q6PGQ1 229 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-207ENST00000476169 ZDHHC24Q6UX98 284 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 RAB11FIP2Q7L804 512 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 PPP1R32Q7Z5V6 425 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-207ENST00000476169 NRSN1Q8IZ57 195 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 MB21D1Q8N884 522 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 NKAIN3Q8N8D7 197 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 KCNG4Q8TDN1 519 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 GRAMD1AQ96CP6 724 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 RNF125Q96EQ8 232 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 RBM15Q96T37 977 aaKnown RBP eCLIP4.66□□□□□ -1.66
VPS13D-207ENST00000476169 DDX23Q9BUQ8 820 aaKnown RBP4.66□□□□□ -1.66
VPS13D-207ENST00000476169 TLR10Q9BXR5 811 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 REXO4Q9GZR2 422 aaKnown RBP4.66□□□□□ -1.66
VPS13D-207ENST00000476169 MRPS18AQ9NVS2 196 aaKnown RBP4.66□□□□□ -1.66
VPS13D-207ENST00000476169 ZSCAN32Q9NX65 697 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 HECAQ9UBI9 543 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-207ENST00000476169 RGS17Q9UGC6 210 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-207ENST00000476169 TBC1D30Q9Y2I9 924 aa4.66□□□□□ -1.66
VPS13D-207ENST00000476169 H7C4K7 107 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 LAMTOR5O43504 91 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 COQ9O75208 318 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 URI1O94763 535 aaPredicted RBP4.65□□□□□ -1.67
VPS13D-207ENST00000476169 PRSS23O95084 383 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 GLP2RO95838 553 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 FCER1AP12319 257 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 CPA1P15085 419 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 HK1P19367 917 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 BTF3P20290 206 aaKnown RBP4.65□□□□□ -1.67
VPS13D-207ENST00000476169 FDXRP22570 491 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 ABCD3P28288 659 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 UBA7P41226 1012 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 PAFAH1B1P43034 410 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 CPT1AP50416 773 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 RBM5P52756 815 aaKnown RBP eCLIP4.65□□□□□ -1.67
VPS13D-207ENST00000476169 SATB1Q01826 763 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 PIGFQ07326 219 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 SLFN5Q08AF3 891 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 NSUN2Q08J23 767 aaKnown RBP eCLIP4.65□□□□□ -1.67
VPS13D-207ENST00000476169 TCF15Q12870 199 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 PLA1AQ53H76 456 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 SLFN13Q68D06 897 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 RINT1Q6NUQ1 792 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 SYT13Q7L8C5 426 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 KRT28Q7Z3Y7 464 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 ARMC8Q8IUR7 673 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 RASGRP3Q8IV61 690 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 ZFPM1Q8IX07 1006 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 D2HGDHQ8N465 521 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 NGEFQ8N5V2 710 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 MDGA1Q8NFP4 955 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 ZNF384Q8TF68 577 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 STAMQ92783 540 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 CUL5Q93034 780 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 SLC46A1Q96NT5 459 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 GNRHR2Q96P88 292 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 ASB2Q96Q27 587 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 YME1L1Q96TA2 773 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 MPHOSPH9Q99550 1183 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 SMOQ99835 787 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 TTYH3Q9C0H2 523 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 MEGF9Q9H1U4 602 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 TP63Q9H3D4 680 aaPredicted RBP4.65□□□□□ -1.67
VPS13D-207ENST00000476169 PLA2G3Q9NZ20 509 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 GIMAP2Q9UG22 337 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 RPS6KA6Q9UK32 745 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 ZHX1Q9UKY1 873 aaPredicted RBP4.65□□□□□ -1.67
VPS13D-207ENST00000476169 CAMK2AQ9UQM7 478 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 DERAQ9Y315 318 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 SH3BP1Q9Y3L3 701 aa4.65□□□□□ -1.67
VPS13D-207ENST00000476169 RSF1Q96T23 1441 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-207ENST00000476169 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 hCG_1807616A0A1W2PRN6 198 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 GTPBP1O00178 669 aaKnown RBP4.64□□□□□ -1.67
VPS13D-207ENST00000476169 PCDH17O14917 1159 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 TRIM13O60858 407 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 PPP6R2O75170 966 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 PTP4A3O75365 173 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 SCGB1D1O95968 90 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 HSPA1AP0DMV8 641 aaKnown RBP4.64□□□□□ -1.67
VPS13D-207ENST00000476169 HSPA1BP0DMV9 641 aaKnown RBP4.64□□□□□ -1.67
VPS13D-207ENST00000476169 ACADMP11310 421 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 CHRM3P20309 590 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 GCSHP23434 173 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 KLRK1P26718 216 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 MSX2P35548 267 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-207ENST00000476169 PGM1P36871 562 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 KRT17Q04695 432 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms