RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 TMCO2Q7Z6W1 182 aaPredicted RBP12.84□□□□□ -0.35
MRPL55-227ENST00000475832 SCUBE3Q8IX30 993 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 FIBCD1Q8N539 461 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 NIPA2Q8N8Q9 360 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 OR10T2Q8NGX3 314 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 UBXN4Q92575 508 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 IGSF21Q96ID5 467 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 RAD9AQ99638 391 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 CNPY3Q9BT09 278 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 GPR62Q9BZJ7 368 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 NKX2-4Q9H2Z4 354 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 SLC28A3Q9HAS3 691 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 CSNK1G1Q9HCP0 422 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 CNGB3Q9NQW8 809 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 SSX2IPQ9Y2D8 614 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 INSL6Q9Y581 213 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 CACNA1AO00555 2505 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 COL4A6Q14031 1691 aa12.83□□□□□ -0.35
MRPL55-227ENST00000475832 PGRMC1O00264 195 aaKnown RBP12.83□□□□□ -0.36
MRPL55-227ENST00000475832 TULP2O00295 520 aa12.83□□□□□ -0.36
MRPL55-227ENST00000475832 PIK3R2O00459 728 aa12.83□□□□□ -0.36
MRPL55-227ENST00000475832 TLL1O43897 1013 aa12.83□□□□□ -0.36
MRPL55-227ENST00000475832 HSF2BPO75031 334 aa12.83□□□□□ -0.36
MRPL55-227ENST00000475832 CA3P07451 260 aa12.83□□□□□ -0.36
MRPL55-227ENST00000475832 KRT7P08729 469 aa12.83□□□□□ -0.36
MRPL55-227ENST00000475832 PDGFRAP16234 1089 aa12.83□□□□□ -0.36
MRPL55-227ENST00000475832 BDNFP23560 247 aa12.83□□□□□ -0.36
MRPL55-227ENST00000475832 GRIK1P39086 918 aa12.83□□□□□ -0.36
MRPL55-227ENST00000475832 TKTL1P51854 596 aa12.83□□□□□ -0.36
MRPL55-227ENST00000475832 ZNF143P52747 638 aaPredicted RBP12.83□□□□□ -0.36
MRPL55-227ENST00000475832 RPL7AP62424 266 aaKnown RBP12.83□□□□□ -0.36
MRPL55-227ENST00000475832 CREMQ03060 361 aa12.83□□□□□ -0.36
MRPL55-227ENST00000475832 ADIGQ0VDE8 80 aa12.83□□□□□ -0.36
MRPL55-227ENST00000475832 MRPL58Q14197 206 aaKnown RBP12.83□□□□□ -0.36
MRPL55-227ENST00000475832 LRRC38Q5VT99 294 aa12.83□□□□□ -0.36
MRPL55-227ENST00000475832 OLFML1Q6UWY5 402 aa12.83□□□□□ -0.36
MRPL55-227ENST00000475832 PAQR9Q6ZVX9 377 aa12.83□□□□□ -0.36
MRPL55-227ENST00000475832 SLC26A9Q7LBE3 791 aa12.83□□□□□ -0.36
MRPL55-227ENST00000475832 COLGALT1Q8NBJ5 622 aa12.83□□□□□ -0.36
MRPL55-227ENST00000475832 SPPL2BQ8TCT7 592 aa12.83□□□□□ -0.36
MRPL55-227ENST00000475832 SP7Q8TDD2 431 aaPredicted RBP12.83□□□□□ -0.36
MRPL55-227ENST00000475832 MAIP1Q8WWC4 291 aa12.83□□□□□ -0.36
MRPL55-227ENST00000475832 IRGQQ8WZA9 623 aa12.83□□□□□ -0.36
MRPL55-227ENST00000475832 PKMYT1Q99640 499 aa12.83□□□□□ -0.36
MRPL55-227ENST00000475832 DDX56Q9NY93 547 aaKnown RBP12.83□□□□□ -0.36
MRPL55-227ENST00000475832 ABI2Q9NYB9 513 aaPredicted RBP12.83□□□□□ -0.36
MRPL55-227ENST00000475832 TTC3P53804 2025 aa12.83□□□□□ -0.36
MRPL55-227ENST00000475832 REV3LO60673 3130 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 UQCRHLA0A096LP55 91 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 GOLGA6L10A0A0M3HER8 536 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 FAM86C2PA6NEL3 165 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 DPYSL4O14531 572 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 CAPN9O14815 690 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 DDX3YO15523 660 aaKnown RBP12.82□□□□□ -0.36
MRPL55-227ENST00000475832 PAPSS1O43252 624 aaPredicted RBP12.82□□□□□ -0.36
MRPL55-227ENST00000475832 ARHGEF15O94989 841 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 GJB6O95452 261 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 SOD2P04179 222 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 URODP06132 367 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 UQCRHP07919 91 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 PBX3P40426 434 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 MAGEA11P43364 429 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 GLUD2P49448 558 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 ARPP19P56211 112 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 RPL10AP62906 217 aaKnown RBP12.82□□□□□ -0.36
MRPL55-227ENST00000475832 TFF2Q03403 129 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 ITIH3Q06033 890 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 SMC1AQ14683 1233 aaKnown RBP12.82□□□□□ -0.36
MRPL55-227ENST00000475832 PSMD5Q16401 504 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 PPP2R2DQ66LE6 453 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 CREG2Q8IUH2 290 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 SCN4BQ8IWT1 228 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 SLC39A11Q8N1S5 342 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 JOSD2Q8TAC2 188 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 ACTRT1Q8TDG2 376 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 COG1Q8WTW3 980 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 RXFP2Q8WXD0 754 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 RIN2Q8WYP3 895 aaPredicted RBP12.82□□□□□ -0.36
MRPL55-227ENST00000475832 CD101Q93033 1021 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 FAM149B1Q96BN6 582 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 RBM41Q96IZ5 413 aaKnown RBP12.82□□□□□ -0.36
MRPL55-227ENST00000475832 SMOQ99835 787 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 HERC2P3Q9BVR0 1158 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 RC3H2Q9HBD1 1191 aaKnown RBP12.82□□□□□ -0.36
MRPL55-227ENST00000475832 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.82□□□□□ -0.36
MRPL55-227ENST00000475832 TJP2Q9UDY2 1190 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 TMEM59LQ9UK28 342 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 MTUS1Q9ULD2 1270 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 STAP1Q9ULZ2 295 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 RWDD3Q9Y3V2 267 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 BACE2Q9Y5Z0 518 aa12.82□□□□□ -0.36
MRPL55-227ENST00000475832 MRPL42Q9Y6G3 142 aaKnown RBP12.82□□□□□ -0.36
MRPL55-227ENST00000475832 XIRP2A4UGR9 3374 aa12.81□□□□□ -0.36
MRPL55-227ENST00000475832 LCHNA4D1U4 455 aa12.81□□□□□ -0.36
MRPL55-227ENST00000475832 ZNF185O15231 689 aa12.81□□□□□ -0.36
MRPL55-227ENST00000475832 ZRANB2O95218 330 aaKnown RBP eCLIP12.81□□□□□ -0.36
MRPL55-227ENST00000475832 ZBED1O96006 694 aa12.81□□□□□ -0.36
MRPL55-227ENST00000475832 GTF2F1P35269 517 aaKnown RBP eCLIP12.81□□□□□ -0.36
MRPL55-227ENST00000475832 PCK1P35558 622 aa12.81□□□□□ -0.36
MRPL55-227ENST00000475832 PTPN9P43378 593 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms