RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 TSR1Q2NL82 804 aaKnown RBP23.35■■□□□ 1.33
MCF2L2-209ENST00000475664 NAA35Q5VZE5 725 aa23.35■■□□□ 1.33
MCF2L2-209ENST00000475664 TMEM110Q86TL2 294 aa23.35■■□□□ 1.33
MCF2L2-209ENST00000475664 SHKBP1Q8TBC3 707 aa23.35■■□□□ 1.33
MCF2L2-209ENST00000475664 FBXO32Q969P5 355 aa23.35■■□□□ 1.33
MCF2L2-209ENST00000475664 TCEAL4Q96EI5 215 aa23.35■■□□□ 1.33
MCF2L2-209ENST00000475664 CPXM1Q96SM3 734 aa23.35■■□□□ 1.33
MCF2L2-209ENST00000475664 ULBP1Q9BZM6 244 aa23.35■■□□□ 1.33
MCF2L2-209ENST00000475664 ST7Q9NRC1 585 aa23.35■■□□□ 1.33
MCF2L2-209ENST00000475664 ZNHIT6Q9NWK9 470 aaKnown RBP23.35■■□□□ 1.33
MCF2L2-209ENST00000475664 SCML2Q9UQR0 700 aa23.35■■□□□ 1.33
MCF2L2-209ENST00000475664 COL6A3P12111 3177 aa23.35■■□□□ 1.33
MCF2L2-209ENST00000475664 ZNF197O14709 1029 aa23.34■■□□□ 1.33
MCF2L2-209ENST00000475664 LCP1P13796 627 aa23.34■■□□□ 1.33
MCF2L2-209ENST00000475664 FSHRP23945 695 aa23.34■■□□□ 1.33
MCF2L2-209ENST00000475664 CDC25CP30307 473 aa23.34■■□□□ 1.33
MCF2L2-209ENST00000475664 ACADSBP45954 432 aa23.34■■□□□ 1.33
MCF2L2-209ENST00000475664 PTPN20Q4JDL3 420 aa23.34■■□□□ 1.33
MCF2L2-209ENST00000475664 CCDC186Q7Z3E2 898 aa23.34■■□□□ 1.33
MCF2L2-209ENST00000475664 SCML4Q8N228 414 aa23.34■■□□□ 1.33
MCF2L2-209ENST00000475664 ITFG1Q8TB96 612 aa23.34■■□□□ 1.33
MCF2L2-209ENST00000475664 OVCA2Q8WZ82 227 aa23.34■■□□□ 1.33
MCF2L2-209ENST00000475664 PPP1R13BQ96KQ4 1090 aa23.34■■□□□ 1.33
MCF2L2-209ENST00000475664 SLITRK1Q96PX8 696 aa23.34■■□□□ 1.33
MCF2L2-209ENST00000475664 CNGB3Q9NQW8 809 aa23.34■■□□□ 1.33
MCF2L2-209ENST00000475664 SEPT11Q9NVA2 429 aaKnown RBP23.34■■□□□ 1.33
MCF2L2-209ENST00000475664 TJP2Q9UDY2 1190 aa23.34■■□□□ 1.33
MCF2L2-209ENST00000475664 MRPS23Q9Y3D9 190 aaKnown RBP23.34■■□□□ 1.33
MCF2L2-209ENST00000475664 DOCK8Q8NF50 2099 aa23.34■■□□□ 1.33
MCF2L2-209ENST00000475664 XIRP2A4UGR9 3374 aa23.34■■□□□ 1.33
MCF2L2-209ENST00000475664 A0A1W2PRU2 124 aa23.33■■□□□ 1.33
MCF2L2-209ENST00000475664 E5RJQ4 531 aa23.33■■□□□ 1.33
MCF2L2-209ENST00000475664 PIK3R2O00459 728 aa23.33■■□□□ 1.33
MCF2L2-209ENST00000475664 DDX3XO00571 662 aaKnown RBP eCLIP23.33■■□□□ 1.33
MCF2L2-209ENST00000475664 USP17L7P0C7H9 530 aa23.33■■□□□ 1.33
MCF2L2-209ENST00000475664 CENPCQ03188 943 aa23.33■■□□□ 1.33
MCF2L2-209ENST00000475664 SMAD2Q15796 467 aaKnown RBP23.33■■□□□ 1.33
MCF2L2-209ENST00000475664 PUS10Q3MIT2 529 aaKnown RBP23.33■■□□□ 1.33
MCF2L2-209ENST00000475664 PM20D1Q6GTS8 502 aa23.33■■□□□ 1.33
MCF2L2-209ENST00000475664 PTCRAQ6ISU1 281 aaPredicted RBP23.33■■□□□ 1.33
MCF2L2-209ENST00000475664 BHLHA9Q7RTU4 235 aa23.33■■□□□ 1.33
MCF2L2-209ENST00000475664 SIX6OS1Q8N1H7 587 aa23.33■■□□□ 1.33
MCF2L2-209ENST00000475664 PDZD8Q8NEN9 1154 aa23.33■■□□□ 1.33
MCF2L2-209ENST00000475664 SLC30A5Q8TAD4 765 aa23.33■■□□□ 1.33
MCF2L2-209ENST00000475664 CPA5Q8WXQ8 436 aa23.33■■□□□ 1.33
MCF2L2-209ENST00000475664 GMIPQ9P107 970 aa23.33■■□□□ 1.33
MCF2L2-209ENST00000475664 SPTBN5Q9NRC6 3674 aaKnown RBP23.32■■□□□ 1.32
MCF2L2-209ENST00000475664 ZBED1O96006 694 aa23.32■■□□□ 1.32
MCF2L2-209ENST00000475664 ZDHHC11BP0C7U3 371 aa23.32■■□□□ 1.32
MCF2L2-209ENST00000475664 GJA1P17302 382 aa23.32■■□□□ 1.32
MCF2L2-209ENST00000475664 CEBPBP17676 345 aa23.32■■□□□ 1.32
MCF2L2-209ENST00000475664 DAOAP59103 153 aa23.32■■□□□ 1.32
MCF2L2-209ENST00000475664 CDK17Q00537 523 aa23.32■■□□□ 1.32
MCF2L2-209ENST00000475664 GET4Q7L5D6 327 aaPredicted RBP23.32■■□□□ 1.32
MCF2L2-209ENST00000475664 GCNAQ96QF7 691 aa23.32■■□□□ 1.32
MCF2L2-209ENST00000475664 PANX2Q96RD6 677 aa23.32■■□□□ 1.32
MCF2L2-209ENST00000475664 ATXN3LQ9H3M9 355 aa23.32■■□□□ 1.32
MCF2L2-209ENST00000475664 TRPM5Q9NZQ8 1165 aa23.32■■□□□ 1.32
MCF2L2-209ENST00000475664 ZNF840PA6NDX5 716 aa23.31■■□□□ 1.32
MCF2L2-209ENST00000475664 PAPSS1O43252 624 aaPredicted RBP23.31■■□□□ 1.32
MCF2L2-209ENST00000475664 FBXO21O94952 628 aa23.31■■□□□ 1.32
MCF2L2-209ENST00000475664 ERBB2P04626 1255 aa23.31■■□□□ 1.32
MCF2L2-209ENST00000475664 EIF4A3P38919 411 aaKnown RBP23.31■■□□□ 1.32
MCF2L2-209ENST00000475664 PPP3CCP48454 512 aa23.31■■□□□ 1.32
MCF2L2-209ENST00000475664 PGFP49763 221 aa23.31■■□□□ 1.32
MCF2L2-209ENST00000475664 CYP4F8P98187 520 aa23.31■■□□□ 1.32
MCF2L2-209ENST00000475664 MAPK8IP2Q13387 824 aaPredicted RBP23.31■■□□□ 1.32
MCF2L2-209ENST00000475664 TEAD2Q15562 447 aa23.31■■□□□ 1.32
MCF2L2-209ENST00000475664 ERICH1Q86X53 443 aa23.31■■□□□ 1.32
MCF2L2-209ENST00000475664 IPO4Q8TEX9 1081 aaKnown RBP23.31■■□□□ 1.32
MCF2L2-209ENST00000475664 CLEC4CQ8WTT0 213 aa23.31■■□□□ 1.32
MCF2L2-209ENST00000475664 ING5Q8WYH8 240 aa23.31■■□□□ 1.32
MCF2L2-209ENST00000475664 NDRG1Q92597 394 aaKnown RBP23.31■■□□□ 1.32
MCF2L2-209ENST00000475664 CHP1Q99653 195 aa23.31■■□□□ 1.32
MCF2L2-209ENST00000475664 CHORDC1Q9UHD1 332 aaPredicted RBP23.31■■□□□ 1.32
MCF2L2-209ENST00000475664 SSU72P8A0A1W2PR75 194 aa23.3■■□□□ 1.32
MCF2L2-209ENST00000475664 FAM170AA1A519 330 aa23.3■■□□□ 1.32
MCF2L2-209ENST00000475664 FECHP22830 423 aa23.3■■□□□ 1.32
MCF2L2-209ENST00000475664 MMP8P22894 467 aa23.3■■□□□ 1.32
MCF2L2-209ENST00000475664 NSFP46459 744 aaKnown RBP23.3■■□□□ 1.32
MCF2L2-209ENST00000475664 GABRB2P47870 512 aa23.3■■□□□ 1.32
MCF2L2-209ENST00000475664 AAK1Q2M2I8 961 aa23.3■■□□□ 1.32
MCF2L2-209ENST00000475664 SNX30Q5VWJ9 437 aa23.3■■□□□ 1.32
MCF2L2-209ENST00000475664 SCD5Q86SK9 330 aa23.3■■□□□ 1.32
MCF2L2-209ENST00000475664 VPS36Q86VN1 386 aa23.3■■□□□ 1.32
MCF2L2-209ENST00000475664 MON1AQ86VX9 555 aa23.3■■□□□ 1.32
MCF2L2-209ENST00000475664 PHF13Q86YI8 300 aaPredicted RBP23.3■■□□□ 1.32
MCF2L2-209ENST00000475664 SCUBE3Q8IX30 993 aa23.3■■□□□ 1.32
MCF2L2-209ENST00000475664 NPAS3Q8IXF0 933 aa23.3■■□□□ 1.32
MCF2L2-209ENST00000475664 MSANTD4Q8NCY6 345 aa23.3■■□□□ 1.32
MCF2L2-209ENST00000475664 IRGQQ8WZA9 623 aa23.3■■□□□ 1.32
MCF2L2-209ENST00000475664 MRPS31Q92665 395 aaKnown RBP23.3■■□□□ 1.32
MCF2L2-209ENST00000475664 MIS12Q9H081 205 aa23.3■■□□□ 1.32
MCF2L2-209ENST00000475664 NMUR1Q9HB89 426 aa23.3■■□□□ 1.32
MCF2L2-209ENST00000475664 TLR8Q9NR97 1041 aaKnown RBP23.3■■□□□ 1.32
MCF2L2-209ENST00000475664 TAS2R14Q9NYV8 317 aa23.3■■□□□ 1.32
MCF2L2-209ENST00000475664 ADAMTS1Q9UHI8 967 aa23.3■■□□□ 1.32
MCF2L2-209ENST00000475664 FAM50BQ9Y247 325 aa23.3■■□□□ 1.32
MCF2L2-209ENST00000475664 A0A087X0T9 212 aa23.29■■□□□ 1.32
MCF2L2-209ENST00000475664 GOLGA6L6A8MZA4 724 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms