RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 SIGLEC16A6NMB1 481 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 MAGEB2O15479 319 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 ABHD2P08910 425 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 MCF2P10911 925 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 PMF1Q6P1K2 205 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 FAM47EQ6ZV65 393 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 CYP4V2Q6ZWL3 525 aaPredicted RBP13.01□□□□□ -0.33
RNF220-211ENST00000474956 UNC45BQ8IWX7 931 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 SCUBE3Q8IX30 993 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 ALLCQ8N6M5 410 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 SHCBP1Q8NEM2 672 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 NDRG1Q92597 394 aaKnown RBP13.01□□□□□ -0.33
RNF220-211ENST00000474956 ACAP3Q96P50 834 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 UBN1Q9NPG3 1134 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 PPP1R12AO14974 1030 aaPredicted RBP13.01□□□□□ -0.33
RNF220-211ENST00000474956 SMNDC1O75940 238 aaKnown RBP eCLIP13.01□□□□□ -0.33
RNF220-211ENST00000474956 IL18RAPO95256 599 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 PDGFRBP09619 1106 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 GCLCP48506 637 aaPredicted RBP13.01□□□□□ -0.33
RNF220-211ENST00000474956 WDR4P57081 412 aaKnown RBP13.01□□□□□ -0.33
RNF220-211ENST00000474956 SURF1Q15526 300 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 ZC3H18Q86VM9 953 aaKnown RBP13.01□□□□□ -0.33
RNF220-211ENST00000474956 TTC30AQ86WT1 665 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 MAML1Q92585 1016 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 WDR83Q9BRX9 315 aaKnown RBP13.01□□□□□ -0.33
RNF220-211ENST00000474956 MIS12Q9H081 205 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 MYLK2Q9H1R3 596 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 ZSWIM8A7E2V4 1837 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 TJP3O95049 919 aa13□□□□□ -0.33
RNF220-211ENST00000474956 ASMTLO95671 621 aa13□□□□□ -0.33
RNF220-211ENST00000474956 GCAP28676 217 aa13□□□□□ -0.33
RNF220-211ENST00000474956 PIGHQ14442 188 aaPredicted RBP13□□□□□ -0.33
RNF220-211ENST00000474956 TMED2Q15363 201 aa13□□□□□ -0.33
RNF220-211ENST00000474956 GPR162Q16538 588 aa13□□□□□ -0.33
RNF220-211ENST00000474956 ZC3H12AQ5D1E8 599 aaKnown RBP13□□□□□ -0.33
RNF220-211ENST00000474956 CAPRIN2Q6IMN6 1127 aaKnown RBP13□□□□□ -0.33
RNF220-211ENST00000474956 MICAL1Q8TDZ2 1067 aa13□□□□□ -0.33
RNF220-211ENST00000474956 INPP5DQ92835 1189 aa13□□□□□ -0.33
RNF220-211ENST00000474956 UTP4Q969X6 686 aaKnown RBP13□□□□□ -0.33
RNF220-211ENST00000474956 RBM41Q96IZ5 413 aaKnown RBP13□□□□□ -0.33
RNF220-211ENST00000474956 LRRC37BQ96QE4 947 aa13□□□□□ -0.33
RNF220-211ENST00000474956 PAIP2Q9BPZ3 127 aaKnown RBP13□□□□□ -0.33
RNF220-211ENST00000474956 TINF2Q9BSI4 451 aa13□□□□□ -0.33
RNF220-211ENST00000474956 VTA1Q9NP79 307 aa13□□□□□ -0.33
RNF220-211ENST00000474956 SKAP2O75563 359 aaPredicted RBP13□□□□□ -0.33
RNF220-211ENST00000474956 KDELR1P24390 212 aa13□□□□□ -0.33
RNF220-211ENST00000474956 ALDH3A1P30838 453 aa13□□□□□ -0.33
RNF220-211ENST00000474956 MAGEA4P43358 317 aa13□□□□□ -0.33
RNF220-211ENST00000474956 VCPP55072 806 aaKnown RBP13□□□□□ -0.33
RNF220-211ENST00000474956 IRX1P78414 480 aaPredicted RBP13□□□□□ -0.33
RNF220-211ENST00000474956 BLMHQ13867 455 aa13□□□□□ -0.33
RNF220-211ENST00000474956 GOLGA7BQ2TAP0 167 aa13□□□□□ -0.33
RNF220-211ENST00000474956 OLFML2BQ68BL8 750 aa13□□□□□ -0.33
RNF220-211ENST00000474956 OR6B2Q6IFH4 312 aa13□□□□□ -0.33
RNF220-211ENST00000474956 FAM71DQ8N9W8 422 aa13□□□□□ -0.33
RNF220-211ENST00000474956 ERP27Q96DN0 273 aa13□□□□□ -0.33
RNF220-211ENST00000474956 ADPGKQ9BRR6 497 aa13□□□□□ -0.33
RNF220-211ENST00000474956 CORO1CQ9ULV4 474 aaPredicted RBP13□□□□□ -0.33
RNF220-211ENST00000474956 E7ENQ6 273 aa13□□□□□ -0.33
RNF220-211ENST00000474956 DCTN3O75935 186 aa13□□□□□ -0.33
RNF220-211ENST00000474956 SLC18A1P54219 525 aa13□□□□□ -0.33
RNF220-211ENST00000474956 SPARCL1Q14515 664 aa13□□□□□ -0.33
RNF220-211ENST00000474956 TAF11Q15544 211 aa13□□□□□ -0.33
RNF220-211ENST00000474956 CA9Q16790 459 aa13□□□□□ -0.33
RNF220-211ENST00000474956 FAM187BQ17R55 369 aa13□□□□□ -0.33
RNF220-211ENST00000474956 FNBP1LQ5T0N5 605 aa13□□□□□ -0.33
RNF220-211ENST00000474956 RGS9BPQ6ZS82 235 aa13□□□□□ -0.33
RNF220-211ENST00000474956 TRABD2AQ86V40 505 aa13□□□□□ -0.33
RNF220-211ENST00000474956 C7orf31Q8N865 590 aa13□□□□□ -0.33
RNF220-211ENST00000474956 DNAJB3Q8WWF6 145 aa13□□□□□ -0.33
RNF220-211ENST00000474956 RXFP2Q8WXD0 754 aa13□□□□□ -0.33
RNF220-211ENST00000474956 TMEM237Q96Q45 408 aa13□□□□□ -0.33
RNF220-211ENST00000474956 NFKBIZQ9BYH8 718 aa13□□□□□ -0.33
RNF220-211ENST00000474956 ADAMTS10Q9H324 1103 aa13□□□□□ -0.33
RNF220-211ENST00000474956 RNPEPL1Q9HAU8 725 aa13□□□□□ -0.33
RNF220-211ENST00000474956 PHTF1Q9UMS5 762 aa13□□□□□ -0.33
RNF220-211ENST00000474956 PPME1Q9Y570 386 aa13□□□□□ -0.33
RNF220-211ENST00000474956 POC1B-GALNT4F8VUJ3 575 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 SPTLC1O15269 473 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 SPAG7O75391 227 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 CCDC130P13994 396 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 LMO2P25791 158 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 CCNA1P78396 465 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 DUSP28Q4G0W2 176 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 ZBED8Q8IZ13 594 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 KCTD6Q8NC69 237 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 NAF1Q96HR8 494 aaKnown RBP12.99□□□□□ -0.33
RNF220-211ENST00000474956 ZNF518BQ9C0D4 1074 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 LHX5Q9H2C1 402 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 SLC24A3Q9HC58 644 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.99□□□□□ -0.33
RNF220-211ENST00000474956 USP18Q9UMW8 372 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 EXOC1LA0A1B0GW35 172 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 MEIS3P2A8K0S8 358 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 DNALI1O14645 258 aaPredicted RBP12.99□□□□□ -0.33
RNF220-211ENST00000474956 PRPF4O43172 522 aaKnown RBP eCLIP12.99□□□□□ -0.33
RNF220-211ENST00000474956 TREHO43280 583 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 GPR32O75388 356 aa12.99□□□□□ -0.33
RNF220-211ENST00000474956 CELF2O95319 508 aaKnown RBP12.99□□□□□ -0.33
RNF220-211ENST00000474956 CALB2P22676 271 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms