RNA–Protein interactions for RNA: ENST00000474838.1

ITGB5-205, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 475 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-205ENST00000474838 FILIP1Q7Z7B0 1213 aa17.13■□□□□ 0.33
ITGB5-205ENST00000474838 CCDC150Q8NCX0 1101 aa17.13■□□□□ 0.33
ITGB5-205ENST00000474838 ZMIZ2Q8NF64 920 aa17.13■□□□□ 0.33
ITGB5-205ENST00000474838 SCAMP5Q8TAC9 235 aa17.13■□□□□ 0.33
ITGB5-205ENST00000474838 RMDN1Q96DB5 314 aa17.13■□□□□ 0.33
ITGB5-205ENST00000474838 GSDMAQ96QA5 445 aa17.13■□□□□ 0.33
ITGB5-205ENST00000474838 SMOQ99835 787 aa17.13■□□□□ 0.33
ITGB5-205ENST00000474838 MMRN2Q9H8L6 949 aa17.13■□□□□ 0.33
ITGB5-205ENST00000474838 APOBEC3GQ9HC16 384 aaKnown RBP17.13■□□□□ 0.33
ITGB5-205ENST00000474838 CFAP97Q9P2B7 532 aa17.13■□□□□ 0.33
ITGB5-205ENST00000474838 CCDC163A0A0D9SF12 145 aa17.12■□□□□ 0.33
ITGB5-205ENST00000474838 COCHO43405 550 aa17.12■□□□□ 0.33
ITGB5-205ENST00000474838 HRO43593 1189 aa17.12■□□□□ 0.33
ITGB5-205ENST00000474838 CYP17A1P05093 508 aa17.12■□□□□ 0.33
ITGB5-205ENST00000474838 ZDHHC11BP0C7U3 371 aa17.12■□□□□ 0.33
ITGB5-205ENST00000474838 FAM200BP0CF97 657 aa17.12■□□□□ 0.33
ITGB5-205ENST00000474838 EPB41P11171 864 aaKnown RBP17.12■□□□□ 0.33
ITGB5-205ENST00000474838 LPAL2Q16609 132 aa17.12■□□□□ 0.33
ITGB5-205ENST00000474838 COBLL1Q53SF7 1204 aa17.12■□□□□ 0.33
ITGB5-205ENST00000474838 HECTD3Q5T447 861 aa17.12■□□□□ 0.33
ITGB5-205ENST00000474838 KRT39Q6A163 491 aa17.12■□□□□ 0.33
ITGB5-205ENST00000474838 C12orf29Q8N999 325 aa17.12■□□□□ 0.33
ITGB5-205ENST00000474838 ENGASEQ8NFI3 743 aa17.12■□□□□ 0.33
ITGB5-205ENST00000474838 CCDC26Q8TAB7 109 aa17.12■□□□□ 0.33
ITGB5-205ENST00000474838 EZH1Q92800 747 aaPredicted RBP17.12■□□□□ 0.33
ITGB5-205ENST00000474838 ACDQ96AP0 544 aa17.12■□□□□ 0.33
ITGB5-205ENST00000474838 TWNKQ96RR1 684 aa17.12■□□□□ 0.33
ITGB5-205ENST00000474838 HNRNPABQ99729 332 aaKnown RBP17.12■□□□□ 0.33
ITGB5-205ENST00000474838 NT5C1AQ9BXI3 368 aa17.12■□□□□ 0.33
ITGB5-205ENST00000474838 FBXO44Q9H4M3 255 aa17.12■□□□□ 0.33
ITGB5-205ENST00000474838 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.12■□□□□ 0.33
ITGB5-205ENST00000474838 GMIPQ9P107 970 aa17.12■□□□□ 0.33
ITGB5-205ENST00000474838 SLC8A2Q9UPR5 921 aa17.12■□□□□ 0.33
ITGB5-205ENST00000474838 CETN3O15182 167 aa17.11■□□□□ 0.33
ITGB5-205ENST00000474838 STX10O60499 249 aa17.11■□□□□ 0.33
ITGB5-205ENST00000474838 CILPO75339 1184 aa17.11■□□□□ 0.33
ITGB5-205ENST00000474838 BEST1O76090 585 aa17.11■□□□□ 0.33
ITGB5-205ENST00000474838 SMC2O95347 1197 aa17.11■□□□□ 0.33
ITGB5-205ENST00000474838 ADORA2BP29275 332 aa17.11■□□□□ 0.33
ITGB5-205ENST00000474838 OPRD1P41143 372 aa17.11■□□□□ 0.33
ITGB5-205ENST00000474838 MXI1P50539 228 aa17.11■□□□□ 0.33
ITGB5-205ENST00000474838 MAP3K7CLP57077 242 aa17.11■□□□□ 0.33
ITGB5-205ENST00000474838 SRSF5Q13243 272 aaKnown RBP17.11■□□□□ 0.33
ITGB5-205ENST00000474838 GAB4Q2WGN9 574 aa17.11■□□□□ 0.33
ITGB5-205ENST00000474838 ZNF658Q5TYW1 1059 aaPredicted RBP17.11■□□□□ 0.33
ITGB5-205ENST00000474838 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.11■□□□□ 0.33
ITGB5-205ENST00000474838 CAMKK1Q8N5S9 505 aa17.11■□□□□ 0.33
ITGB5-205ENST00000474838 RPLP0P6Q8NHW5 317 aa17.11■□□□□ 0.33
ITGB5-205ENST00000474838 FAXDC2Q96IV6 333 aa17.11■□□□□ 0.33
ITGB5-205ENST00000474838 ZFRQ96KR1 1074 aaKnown RBP17.11■□□□□ 0.33
ITGB5-205ENST00000474838 DNAI2Q9GZS0 605 aa17.11■□□□□ 0.33
ITGB5-205ENST00000474838 CCSER2Q9H7U1 834 aa17.11■□□□□ 0.33
ITGB5-205ENST00000474838 TBC1D14Q9P2M4 693 aa17.11■□□□□ 0.33
ITGB5-205ENST00000474838 CHORDC1Q9UHD1 332 aaPredicted RBP17.11■□□□□ 0.33
ITGB5-205ENST00000474838 DMXL1Q9Y485 3027 aa17.11■□□□□ 0.33
ITGB5-205ENST00000474838 E2F8A0AVK6 867 aa17.1■□□□□ 0.33
ITGB5-205ENST00000474838 SLC16A3O15427 465 aaKnown RBP17.1■□□□□ 0.33
ITGB5-205ENST00000474838 LRP3O75074 770 aa17.1■□□□□ 0.33
ITGB5-205ENST00000474838 ADH1CP00326 375 aa17.1■□□□□ 0.33
ITGB5-205ENST00000474838 RETP07949 1114 aa17.1■□□□□ 0.33
ITGB5-205ENST00000474838 CD58P19256 250 aa17.1■□□□□ 0.33
ITGB5-205ENST00000474838 HOXC13P31276 330 aa17.1■□□□□ 0.33
ITGB5-205ENST00000474838 PRCPP42785 496 aa17.1■□□□□ 0.33
ITGB5-205ENST00000474838 LMNB2Q03252 620 aa17.1■□□□□ 0.33
ITGB5-205ENST00000474838 DHCR24Q15392 516 aa17.1■□□□□ 0.33
ITGB5-205ENST00000474838 CLEC20AQ6ZU45 233 aa17.1■□□□□ 0.33
ITGB5-205ENST00000474838 CEP68Q76N32 757 aa17.1■□□□□ 0.33
ITGB5-205ENST00000474838 SYT13Q7L8C5 426 aa17.1■□□□□ 0.33
ITGB5-205ENST00000474838 ADGRG2Q8IZP9 1017 aa17.1■□□□□ 0.33
ITGB5-205ENST00000474838 FBXL13Q8NEE6 735 aa17.1■□□□□ 0.33
ITGB5-205ENST00000474838 SPATA20Q8TB22 786 aa17.1■□□□□ 0.33
ITGB5-205ENST00000474838 WHAMMQ8TF30 809 aa17.1■□□□□ 0.33
ITGB5-205ENST00000474838 OTUB2Q96DC9 234 aa17.1■□□□□ 0.33
ITGB5-205ENST00000474838 EEF2KMTQ96G04 330 aa17.1■□□□□ 0.33
ITGB5-205ENST00000474838 TSG101Q99816 390 aa17.1■□□□□ 0.33
ITGB5-205ENST00000474838 DUSP9Q99956 384 aaKnown RBP17.1■□□□□ 0.33
ITGB5-205ENST00000474838 GTPBP4Q9BZE4 634 aaKnown RBP17.1■□□□□ 0.33
ITGB5-205ENST00000474838 PNPLA8Q9NP80 782 aa17.1■□□□□ 0.33
ITGB5-205ENST00000474838 USP18Q9UMW8 372 aa17.1■□□□□ 0.33
ITGB5-205ENST00000474838 KIAA1549LQ6ZVL6 1849 aa17.1■□□□□ 0.33
ITGB5-205ENST00000474838 SCAMP3O14828 347 aaKnown RBP17.09■□□□□ 0.33
ITGB5-205ENST00000474838 TGM1P22735 817 aa17.09■□□□□ 0.33
ITGB5-205ENST00000474838 EIF2DP41214 584 aaKnown RBP17.09■□□□□ 0.33
ITGB5-205ENST00000474838 PXNP49023 591 aaPredicted RBP17.09■□□□□ 0.33
ITGB5-205ENST00000474838 PUM1Q14671 1186 aaKnown RBP eCLIP17.09■□□□□ 0.33
ITGB5-205ENST00000474838 GPRIN1Q7Z2K8 1008 aa17.09■□□□□ 0.33
ITGB5-205ENST00000474838 ZC3H3Q8IXZ2 948 aaKnown RBP17.09■□□□□ 0.33
ITGB5-205ENST00000474838 TTC39CQ8N584 583 aa17.09■□□□□ 0.33
ITGB5-205ENST00000474838 GAB3Q8WWW8 586 aa17.09■□□□□ 0.33
ITGB5-205ENST00000474838 SMARCE1Q969G3 411 aa17.09■□□□□ 0.33
ITGB5-205ENST00000474838 CYFIP2Q96F07 1278 aa17.09■□□□□ 0.33
ITGB5-205ENST00000474838 TIGD1Q96MW7 591 aa17.09■□□□□ 0.33
ITGB5-205ENST00000474838 NACA2Q9H009 215 aa17.09■□□□□ 0.33
ITGB5-205ENST00000474838 FAM124BQ9H5Z6 455 aaPredicted RBP17.09■□□□□ 0.33
ITGB5-205ENST00000474838 PARD6AQ9NPB6 346 aa17.09■□□□□ 0.33
ITGB5-205ENST00000474838 TLR8Q9NR97 1041 aaKnown RBP17.09■□□□□ 0.33
ITGB5-205ENST00000474838 DLL3Q9NYJ7 618 aa17.09■□□□□ 0.33
ITGB5-205ENST00000474838 HOOK1Q9UJC3 728 aaKnown RBP17.09■□□□□ 0.33
ITGB5-205ENST00000474838 SH3BP1Q9Y3L3 701 aa17.09■□□□□ 0.33
ITGB5-205ENST00000474838 PCDHA5Q9Y5H7 936 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms