RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 C2orf78A6NCI8 922 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 TNFRSF10AO00220 468 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 USP17L7P0C7H9 530 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 HDCP19113 662 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 JAM2P57087 298 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 ARID5AQ03989 594 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 ADIGQ0VDE8 80 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 TDGQ13569 410 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 RAB41Q5JT25 222 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 TANGO2Q6ICL3 276 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 PMF1Q6P1K2 205 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 CCDC186Q7Z3E2 898 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 PASD1Q8IV76 773 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 SLC44A3Q8N4M1 653 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 ARL14EPQ8N8R7 260 aaPredicted RBP13.07□□□□□ -0.32
DDX56-209ENST00000473924 TTC16Q8NEE8 873 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 SLC35F5Q8WV83 523 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 KCTD13Q8WZ19 329 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 E2F7Q96AV8 911 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 ELSPBP1Q96BH3 223 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 HSFY1Q96LI6 401 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 CYP2S1Q96SQ9 504 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 XPO4Q9C0E2 1151 aaKnown RBP13.07□□□□□ -0.32
DDX56-209ENST00000473924 NACA2Q9H009 215 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 SMG9Q9H0W8 520 aaKnown RBP13.07□□□□□ -0.32
DDX56-209ENST00000473924 PCDHGC3Q9UN70 934 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 USP3Q9Y6I4 520 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 OBSL1O75147 1896 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 NCANO14594 1321 aa13.07□□□□□ -0.32
DDX56-209ENST00000473924 MYO16Q9Y6X6 1858 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 DENND4CQ5VZ89 1909 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 PIK3R2O00459 728 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 ECI2O75521 394 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 ZBED1O96006 694 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 CFHP08603 1231 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 CCDC172P0C7W6 258 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 PFKLP17858 780 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 FCARP24071 287 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 VIPR2P41587 438 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 GPD2P43304 727 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 ACADSBP45954 432 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 PSEN1P49768 467 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 HECTD3Q5T447 861 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 TAF3Q5VWG9 929 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 FMNL3Q8IVF7 1028 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 YAF2Q8IY57 180 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 ARHGAP18Q8N392 663 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 CELF5Q8N6W0 485 aaKnown RBP13.06□□□□□ -0.32
DDX56-209ENST00000473924 NOX5Q96PH1 765 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 RPP25Q9BUL9 199 aaKnown RBP13.06□□□□□ -0.32
DDX56-209ENST00000473924 NUP58Q9BVL2 599 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 ULBP1Q9BZM6 244 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 TRPV4Q9HBA0 871 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 CNGB3Q9NQW8 809 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 TDP1Q9NUW8 608 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 NAGPAQ9UK23 515 aa13.06□□□□□ -0.32
DDX56-209ENST00000473924 A0A1W2PQH9 124 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 HEPACAM2A8MVW5 462 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 DCXO43602 365 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 PRAMEF12O95522 483 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 ZDHHC11BP0C7U3 371 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 RALAP11233 206 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 ALADP13716 330 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 FERP16591 822 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 PSMC3P17980 439 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 WEE1P30291 646 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 TUBP50607 506 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 GRM2Q14416 872 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 SNX30Q5VWJ9 437 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 VITQ6UXI7 678 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 NOP9Q86U38 636 aaKnown RBP13.05□□□□□ -0.32
DDX56-209ENST00000473924 ZNF677Q86XU0 584 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 TMEM35BQ8NCS4 154 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 C1orf131Q8NDD1 294 aaKnown RBP13.05□□□□□ -0.32
DDX56-209ENST00000473924 ZNF397Q8NF99 534 aaPredicted RBP13.05□□□□□ -0.32
DDX56-209ENST00000473924 EPS8L1Q8TE68 723 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 STK32AQ8WU08 396 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 GOLGA1Q92805 767 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 USP13Q92995 863 aaPredicted RBP13.05□□□□□ -0.32
DDX56-209ENST00000473924 SLC22A12Q96S37 553 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 TRMT61BQ9BVS5 477 aaKnown RBP13.05□□□□□ -0.32
DDX56-209ENST00000473924 PLA2G2FQ9BZM2 168 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 MIS12Q9H081 205 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 RBSNQ9H1K0 784 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 LHX5Q9H2C1 402 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 CCSER2Q9H7U1 834 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 KIF9Q9HAQ2 790 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 MYO6Q9UM54 1294 aa13.05□□□□□ -0.32
DDX56-209ENST00000473924 NUP210Q8TEM1 1887 aaPredicted RBP13.04□□□□□ -0.32
DDX56-209ENST00000473924 ANAPC1Q9H1A4 1944 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 LRRC53A6NM62 1247 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 COCHO43405 550 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 TLR5O60602 858 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 FBXO21O94952 628 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 OAS1P00973 400 aaKnown RBP13.04□□□□□ -0.32
DDX56-209ENST00000473924 MMEP08473 750 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 MBL2P11226 248 aaPredicted RBP13.04□□□□□ -0.32
DDX56-209ENST00000473924 RARGP13631 454 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 ATP5C1P36542 298 aaKnown RBP13.04□□□□□ -0.32
DDX56-209ENST00000473924 PBX1P40424 430 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms