RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 CAVIN1Q6NZI2 390 aaKnown RBP19.99■□□□□ 0.79
PTCD3-210ENST00000473829 GBP6Q6ZN66 633 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 ANKRD52Q8NB46 1076 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 TTC16Q8NEE8 873 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 PRSS33Q8NF86 280 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 PJA1Q8NG27 643 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 TTC8Q8TAM2 541 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 SH3RF2Q8TEC5 729 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 SHDQ96IW2 340 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 FAM83CQ9BQN1 747 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 NDST4Q9H3R1 872 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 FBXO44Q9H4M3 255 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 CCSER2Q9H7U1 834 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 SIX2Q9NPC8 291 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 UBE2TQ9NPD8 197 aaPredicted RBP19.99■□□□□ 0.79
PTCD3-210ENST00000473829 GKN1Q9NS71 199 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 AJAP1Q9UKB5 411 aaPredicted RBP19.99■□□□□ 0.79
PTCD3-210ENST00000473829 PIAS3Q9Y6X2 628 aa19.99■□□□□ 0.79
PTCD3-210ENST00000473829 COCHO43405 550 aa19.98■□□□□ 0.79
PTCD3-210ENST00000473829 DCNP07585 359 aaKnown RBP19.98■□□□□ 0.79
PTCD3-210ENST00000473829 PAEPP09466 180 aa19.98■□□□□ 0.79
PTCD3-210ENST00000473829 GLULP15104 373 aa19.98■□□□□ 0.79
PTCD3-210ENST00000473829 BRD2P25440 801 aaKnown RBP19.98■□□□□ 0.79
PTCD3-210ENST00000473829 SLC7A9P82251 487 aa19.98■□□□□ 0.79
PTCD3-210ENST00000473829 PDE4CQ08493 712 aa19.98■□□□□ 0.79
PTCD3-210ENST00000473829 MTF1Q14872 753 aa19.98■□□□□ 0.79
PTCD3-210ENST00000473829 EXOC3L4Q17RC7 722 aa19.98■□□□□ 0.79
PTCD3-210ENST00000473829 VWA3BQ502W6 1294 aa19.98■□□□□ 0.79
PTCD3-210ENST00000473829 TCP11X2Q5H9J9 407 aa19.98■□□□□ 0.79
PTCD3-210ENST00000473829 PIGZQ86VD9 579 aa19.98■□□□□ 0.79
PTCD3-210ENST00000473829 CCDC105Q8IYK2 499 aa19.98■□□□□ 0.79
PTCD3-210ENST00000473829 NMUR1Q9HB89 426 aa19.98■□□□□ 0.79
PTCD3-210ENST00000473829 LTB4R2Q9NPC1 389 aa19.98■□□□□ 0.79
PTCD3-210ENST00000473829 HPS4Q9NQG7 708 aa19.98■□□□□ 0.79
PTCD3-210ENST00000473829 OSER1Q9NX31 292 aa19.98■□□□□ 0.79
PTCD3-210ENST00000473829 SMPD4Q9NXE4 827 aa19.98■□□□□ 0.79
PTCD3-210ENST00000473829 DLGAP2Q9P1A6 1054 aa19.98■□□□□ 0.79
PTCD3-210ENST00000473829 CNTN6Q9UQ52 1028 aa19.98■□□□□ 0.79
PTCD3-210ENST00000473829 SCML2Q9UQR0 700 aa19.98■□□□□ 0.79
PTCD3-210ENST00000473829 CPQQ9Y646 472 aa19.98■□□□□ 0.79
PTCD3-210ENST00000473829 F5P12259 2224 aa19.97■□□□□ 0.79
PTCD3-210ENST00000473829 OTOL1A6NHN0 477 aaPredicted RBP19.97■□□□□ 0.79
PTCD3-210ENST00000473829 ARSAP15289 507 aa19.97■□□□□ 0.79
PTCD3-210ENST00000473829 TCF3P15923 654 aa19.97■□□□□ 0.79
PTCD3-210ENST00000473829 TARSP26639 723 aaKnown RBP19.97■□□□□ 0.79
PTCD3-210ENST00000473829 EEF1GP26641 437 aaKnown RBP19.97■□□□□ 0.79
PTCD3-210ENST00000473829 PDE6CP51160 858 aa19.97■□□□□ 0.79
PTCD3-210ENST00000473829 BCAT1P54687 386 aa19.97■□□□□ 0.79
PTCD3-210ENST00000473829 PLCB2Q00722 1185 aa19.97■□□□□ 0.79
PTCD3-210ENST00000473829 TYRO3Q06418 890 aa19.97■□□□□ 0.79
PTCD3-210ENST00000473829 UBXN2BQ14CS0 331 aa19.97■□□□□ 0.79
PTCD3-210ENST00000473829 PKDCCQ504Y2 493 aa19.97■□□□□ 0.79
PTCD3-210ENST00000473829 RAB41Q5JT25 222 aa19.97■□□□□ 0.79
PTCD3-210ENST00000473829 DPY19L2P1Q6NXN4 242 aa19.97■□□□□ 0.79
PTCD3-210ENST00000473829 ZNF687Q8N1G0 1237 aa19.97■□□□□ 0.79
PTCD3-210ENST00000473829 UBA3Q8TBC4 463 aa19.97■□□□□ 0.79
PTCD3-210ENST00000473829 CSGALNACT1Q8TDX6 532 aa19.97■□□□□ 0.79
PTCD3-210ENST00000473829 ZFRQ96KR1 1074 aaKnown RBP19.97■□□□□ 0.79
PTCD3-210ENST00000473829 THG1LQ9NWX6 298 aaKnown RBP19.97■□□□□ 0.79
PTCD3-210ENST00000473829 TAB2Q9NYJ8 693 aa19.97■□□□□ 0.79
PTCD3-210ENST00000473829 APEX2Q9UBZ4 518 aa19.97■□□□□ 0.79
PTCD3-210ENST00000473829 SIT1Q9Y3P8 196 aa19.97■□□□□ 0.79
PTCD3-210ENST00000473829 WNT6Q9Y6F9 365 aa19.97■□□□□ 0.79
PTCD3-210ENST00000473829 USP3Q9Y6I4 520 aa19.97■□□□□ 0.79
PTCD3-210ENST00000473829 A0A1W2PQH9 124 aa19.96■□□□□ 0.79
PTCD3-210ENST00000473829 BECN2A8MW95 431 aa19.96■□□□□ 0.79
PTCD3-210ENST00000473829 LEFTY2O00292 366 aa19.96■□□□□ 0.79
PTCD3-210ENST00000473829 KRT5P13647 590 aa19.96■□□□□ 0.79
PTCD3-210ENST00000473829 TUBP50607 506 aa19.96■□□□□ 0.79
PTCD3-210ENST00000473829 BST2Q10589 180 aaKnown RBP19.96■□□□□ 0.79
PTCD3-210ENST00000473829 HECTD3Q5T447 861 aa19.96■□□□□ 0.79
PTCD3-210ENST00000473829 LCLAT1Q6UWP7 414 aa19.96■□□□□ 0.79
PTCD3-210ENST00000473829 CCDC186Q7Z3E2 898 aa19.96■□□□□ 0.79
PTCD3-210ENST00000473829 SCD5Q86SK9 330 aa19.96■□□□□ 0.79
PTCD3-210ENST00000473829 CHFRQ96EP1 664 aa19.96■□□□□ 0.79
PTCD3-210ENST00000473829 EBF3Q9H4W6 596 aa19.96■□□□□ 0.79
PTCD3-210ENST00000473829 FANCLQ9NW38 375 aa19.96■□□□□ 0.79
PTCD3-210ENST00000473829 KIAA1257Q9ULG3 409 aa19.96■□□□□ 0.79
PTCD3-210ENST00000473829 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.96■□□□□ 0.79
PTCD3-210ENST00000473829 FAM170BA6NMN3 283 aa19.95■□□□□ 0.78
PTCD3-210ENST00000473829 SCAMP3O14828 347 aaKnown RBP19.95■□□□□ 0.78
PTCD3-210ENST00000473829 XPO1O14980 1071 aaKnown RBP19.95■□□□□ 0.78
PTCD3-210ENST00000473829 TLR5O60602 858 aa19.95■□□□□ 0.78
PTCD3-210ENST00000473829 MBL2P11226 248 aaPredicted RBP19.95■□□□□ 0.78
PTCD3-210ENST00000473829 CTHP32929 405 aa19.95■□□□□ 0.78
PTCD3-210ENST00000473829 KPNA1P52294 538 aaPredicted RBP19.95■□□□□ 0.78
PTCD3-210ENST00000473829 KCNMA1Q12791 1236 aa19.95■□□□□ 0.78
PTCD3-210ENST00000473829 TCF15Q12870 199 aa19.95■□□□□ 0.78
PTCD3-210ENST00000473829 NCAPHQ15003 741 aa19.95■□□□□ 0.78
PTCD3-210ENST00000473829 ARHGAP44Q17R89 818 aa19.95■□□□□ 0.78
PTCD3-210ENST00000473829 TXNDC11Q6PKC3 985 aa19.95■□□□□ 0.78
PTCD3-210ENST00000473829 ZNF852Q6ZMS4 543 aa19.95■□□□□ 0.78
PTCD3-210ENST00000473829 UBXN6Q9BZV1 441 aa19.95■□□□□ 0.78
PTCD3-210ENST00000473829 ACP6Q9NPH0 428 aa19.95■□□□□ 0.78
PTCD3-210ENST00000473829 TLR8Q9NR97 1041 aaKnown RBP19.95■□□□□ 0.78
PTCD3-210ENST00000473829 HESX1Q9UBX0 185 aa19.95■□□□□ 0.78
PTCD3-210ENST00000473829 SPECC1L-ADORA2AF8WAN1 911 aa19.94■□□□□ 0.78
PTCD3-210ENST00000473829 GABBR2O75899 941 aa19.94■□□□□ 0.78
PTCD3-210ENST00000473829 TBX18O95935 607 aa19.94■□□□□ 0.78
PTCD3-210ENST00000473829 MFAP3P55082 362 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms