RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 SLC9A7Q96T83 725 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 RAD9AQ99638 391 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 CSNK1G1Q9HCP0 422 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 DMAP1Q9NPF5 467 aaPredicted RBP11.28□□□□□ -0.6
SP140-208ENST00000473711 CHST7Q9NS84 486 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 TMEM59LQ9UK28 342 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 PCDHB5Q9Y5E4 795 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 PCDHB12Q9Y5F1 795 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 TSC2P49815 1807 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 C2CD4BA6NLJ0 364 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 MIF4GDA9UHW6 222 aaKnown RBP11.27□□□□□ -0.61
SP140-208ENST00000473711 F8VP50 259 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 ADAM12O43184 909 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 TLL1O43897 1013 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 CEP104O60308 925 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 SLU7O95391 586 aaKnown RBP11.27□□□□□ -0.61
SP140-208ENST00000473711 PDGFRAP16234 1089 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 RPL17P18621 184 aaKnown RBP11.27□□□□□ -0.61
SP140-208ENST00000473711 GPD1P21695 349 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 MAN1A1P33908 653 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 MARCKSL1P49006 195 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 GPR15P49685 360 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 PEX5P50542 639 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 TAS2R40P59535 323 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 MRPS5P82675 430 aaKnown RBP11.27□□□□□ -0.61
SP140-208ENST00000473711 ADCY1Q08828 1119 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 GPR17Q13304 367 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 PSMD5Q16401 504 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 EFHC1Q5JVL4 640 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 SDHAF4Q5VUM1 108 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 TRNP1Q6NT89 227 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 RNF19BQ6ZMZ0 732 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 DDX53Q86TM3 631 aaKnown RBP11.27□□□□□ -0.61
SP140-208ENST00000473711 CREG2Q8IUH2 290 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 CEP112Q8N8E3 955 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 ATAD1Q8NBU5 361 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 LRRN4CLQ8ND94 238 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 MNS1Q8NEH6 495 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 PIK3R5Q8WYR1 880 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 ALG3Q92685 438 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 HERC2P3Q9BVR0 1158 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 OXCT2Q9BYC2 517 aaPredicted RBP11.27□□□□□ -0.61
SP140-208ENST00000473711 ULBP1Q9BZM6 244 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 MTIF3Q9H2K0 278 aaKnown RBP11.27□□□□□ -0.61
SP140-208ENST00000473711 SMARCAL1Q9NZC9 954 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 EHD2Q9NZN4 543 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 MTRRQ9UBK8 725 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 LCMT1Q9UIC8 334 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 SLC27A5Q9Y2P5 690 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 PCDHA3Q9Y5H8 950 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 BACE2Q9Y5Z0 518 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 CDY1Q9Y6F8 540 aa11.27□□□□□ -0.61
SP140-208ENST00000473711 CCDC66A2RUB6 948 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 LCHNA4D1U4 455 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 CARNS1A5YM72 827 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 PDE2AO00408 941 aaPredicted RBP11.26□□□□□ -0.61
SP140-208ENST00000473711 FGF18O76093 207 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 FBXO21O94952 628 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 USP17L7P0C7H9 530 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 OR1D2P34982 312 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 CTNNA1P35221 906 aaKnown RBP11.26□□□□□ -0.61
SP140-208ENST00000473711 GJC1P36383 396 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 FLT3P36888 993 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 GLUD2P49448 558 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 ZNF143P52747 638 aaPredicted RBP11.26□□□□□ -0.61
SP140-208ENST00000473711 DSG1Q02413 1049 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 KRT17Q04695 432 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 IFRD2Q12894 506 aaPredicted RBP11.26□□□□□ -0.61
SP140-208ENST00000473711 ZNF211Q13398 564 aaPredicted RBP11.26□□□□□ -0.61
SP140-208ENST00000473711 DDR2Q16832 855 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 C15orf59Q2T9L4 293 aaPredicted RBP11.26□□□□□ -0.61
SP140-208ENST00000473711 RAB41Q5JT25 222 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 C9orf50Q5SZB4 431 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 C6orf132Q5T0Z8 1188 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 CCDC181Q5TID7 509 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 SLC26A9Q7LBE3 791 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 VPS52Q8N1B4 723 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 NIPA2Q8N8Q9 360 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 FNIP1Q8TF40 1166 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 UBE2Q2Q8WVN8 375 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 AUTS2Q8WXX7 1259 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 FUBP3Q96I24 572 aaKnown RBP eCLIP11.26□□□□□ -0.61
SP140-208ENST00000473711 ASNSD1Q9NWL6 643 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 PLA2G2EQ9NZK7 142 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 RABGEF1Q9UJ41 708 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 NR2E3Q9Y5X4 410 aa11.26□□□□□ -0.61
SP140-208ENST00000473711 MTMR11A4FU01 709 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 GRXCR1A8MXD5 290 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 CES2O00748 559 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 SOAT2O75908 522 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 VNN2O95498 520 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 ZBED1O96006 694 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 URODP06132 367 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 LINC00271P0C7V0 271 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 PYGMP11217 842 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 TCF4P15884 667 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 DNAJB2P25686 324 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 PPM1AP35813 382 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 SCNN1AP37088 669 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 PAFAH1B1P43034 410 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms