RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 MAGEC2Q9UBF1 373 aaPredicted RBP9.74□□□□□ -0.85
SMC4-213ENST00000472282 DSEQ9UL01 958 aa9.74□□□□□ -0.85
SMC4-213ENST00000472282 MAFFQ9ULX9 164 aa9.74□□□□□ -0.85
SMC4-213ENST00000472282 EML5Q05BV3 1969 aa9.74□□□□□ -0.85
SMC4-213ENST00000472282 FIGNL2A6NMB9 653 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 FAM170BA6NMN3 283 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 HEPACAM2A8MVW5 462 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 ARNTLO00327 626 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 PRKCSHP14314 528 aaPredicted RBP9.73□□□□□ -0.85
SMC4-213ENST00000472282 ACAT1P24752 427 aaKnown RBP9.73□□□□□ -0.85
SMC4-213ENST00000472282 EEF1GP26641 437 aaKnown RBP9.73□□□□□ -0.85
SMC4-213ENST00000472282 GDI1P31150 447 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 GPR15P49685 360 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 EPHB3P54753 998 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 CYP4F8P98187 520 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 PFKPQ01813 784 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 KCNMA1Q12791 1236 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 CBLBQ13191 982 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 MAN2A1Q16706 1144 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 SOWAHAQ2M3V2 549 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 SGSM1Q2NKQ1 1148 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 TCP11X2Q5H9J9 407 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 WDR44Q5JSH3 913 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 METTL23Q86XA0 190 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 C1orf210Q8IVY1 113 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 DHX40Q8IX18 779 aaKnown RBP9.73□□□□□ -0.85
SMC4-213ENST00000472282 TMEM86AQ8N2M4 240 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 CCDC150Q8NCX0 1101 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 GIPC2Q8TF65 315 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 LRRN4Q8WUT4 740 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 KBTBD7Q8WVZ9 684 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 TAF4BQ92750 862 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 PSMG2Q969U7 264 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 SHDQ96IW2 340 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 SEPT5Q99719 369 aaPredicted RBP9.73□□□□□ -0.85
SMC4-213ENST00000472282 MRPL45Q9BRJ2 306 aaKnown RBP9.73□□□□□ -0.85
SMC4-213ENST00000472282 TUBGCP2Q9BSJ2 902 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 TRMT61BQ9BVS5 477 aaKnown RBP9.73□□□□□ -0.85
SMC4-213ENST00000472282 BRD9Q9H8M2 597 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 APOBEC3GQ9HC16 384 aaKnown RBP9.73□□□□□ -0.85
SMC4-213ENST00000472282 RAB20Q9NX57 234 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 TAB2Q9NYJ8 693 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 COQ4Q9Y3A0 265 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 USP34Q70CQ2 3546 aa9.73□□□□□ -0.85
SMC4-213ENST00000472282 SMTNL1A8MU46 457 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 PES1O00541 588 aaKnown RBP9.72□□□□□ -0.85
SMC4-213ENST00000472282 PRAMEF12O95522 483 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 HAPLN1P10915 354 aaPredicted RBP9.72□□□□□ -0.85
SMC4-213ENST00000472282 PSMC3P17980 439 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 GABRR2P28476 465 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 ASPAP45381 313 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 RAP1GAPP47736 663 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 ALDH1A3P47895 512 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 SOX9P48436 509 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 PLD1Q13393 1074 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 IQCB1Q15051 598 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 MGAT5BQ3V5L5 792 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 MIIPQ5JXC2 388 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 SDHAF4Q5VUM1 108 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 TSSK4Q6SA08 328 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 LRSAM1Q6UWE0 723 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 DPH6Q7L8W6 267 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 TMEM150AQ86TG1 271 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 ARID3BQ8IVW6 561 aaPredicted RBP9.72□□□□□ -0.85
SMC4-213ENST00000472282 THEM5Q8N1Q8 247 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 LEMD2Q8NC56 503 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 NANOS1Q8WY41 292 aaKnown RBP9.72□□□□□ -0.85
SMC4-213ENST00000472282 DNASE1L2Q92874 299 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 CLDN23Q96B33 292 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 ZFYVE19Q96K21 471 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 NIF3L1Q9GZT8 377 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 SMG9Q9H0W8 520 aaKnown RBP9.72□□□□□ -0.85
SMC4-213ENST00000472282 SDCBP2Q9H190 292 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 HSD3B7Q9H2F3 369 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 ATXN3LQ9H3M9 355 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 TRPV4Q9HBA0 871 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 CBX8Q9HC52 389 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 SPATA6Q9NWH7 488 aaPredicted RBP9.72□□□□□ -0.85
SMC4-213ENST00000472282 ABI2Q9NYB9 513 aaPredicted RBP9.72□□□□□ -0.85
SMC4-213ENST00000472282 NDRG2Q9UN36 371 aaKnown RBP9.72□□□□□ -0.85
SMC4-213ENST00000472282 MYO15AQ9UKN7 3530 aa9.72□□□□□ -0.85
SMC4-213ENST00000472282 BECN2A8MW95 431 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 RNF225M0QZC1 329 aaPredicted RBP9.71□□□□□ -0.86
SMC4-213ENST00000472282 GABRDO14764 452 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 PMM2O15305 246 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 P4HA2O15460 535 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 TACC1O75410 805 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 P4HA1P13674 534 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 ZNF18P17022 549 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 HMGA1P17096 107 aaKnown RBP9.71□□□□□ -0.86
SMC4-213ENST00000472282 WARSP23381 471 aaKnown RBP9.71□□□□□ -0.86
SMC4-213ENST00000472282 LHX1P48742 406 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 CDH8P55286 799 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 TSPY1Q01534 308 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 CETN1Q12798 172 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 LRMPQ12912 555 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 KRT31Q15323 416 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 NR6A1Q15406 480 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 VWA3BQ502W6 1294 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 GPR158Q5T848 1215 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms