RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 MT-CO1P00395 513 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 POMCP01189 267 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 EIF2S3P41091 472 aaKnown RBP13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 NCF4Q15080 339 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 TTC39BQ5VTQ0 682 aaPredicted RBP13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 DENND1BQ6P3S1 775 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 SPATA21Q7Z572 469 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 TNIP2Q8NFZ5 429 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 CHN1P15882 459 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 JAK1P23458 1154 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 ARHGDIBP52566 201 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 GALCP54803 685 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 TOB2Q14106 344 aaPredicted RBP13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 SETD3Q86TU7 594 aaPredicted RBP13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 OLFM3Q96PB7 478 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 RPS6KL1Q9Y6S9 549 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 PFASO15067 1338 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 NR3C2P08235 984 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 ACADSBP45954 432 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 DHX34Q14147 1143 aaKnown RBP13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 CTXN3Q4LDR2 81 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 SPATA4Q8NEY3 305 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 GLMNQ92990 594 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 HDHD2Q9H0R4 259 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 FAM187AA6NFU0 413 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 MSH4O15457 936 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 SLC1A1P43005 524 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 DEFA1P59665 94 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 DEFA3P59666 94 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 DGKKQ5KSL6 1271 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 RNF44Q7L0R7 432 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 SP8Q8IXZ3 490 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 TPD52L3Q96J77 140 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 ATP6V1G3Q96LB4 118 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 OLFM1Q99784 485 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 STARD7Q9NQZ5 370 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 MAFFQ9ULX9 164 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 PIK3CDO00329 1044 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 KRT16P08779 473 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 RBP3P10745 1247 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 TRIM25Q14258 630 aaKnown RBP13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 TFAP2DQ7Z6R9 452 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 CENPLQ8N0S6 344 aaPredicted RBP13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 KLHL1Q9NR64 748 aa13.67□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 PVALEFA0A1B0GWK0 134 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 PLA2G6O60733 806 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 SERPINB1P30740 379 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 EPHB3P54753 998 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 HLA-DQA1Q5Y7H0 255 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 EIF3LQ9Y262 564 aaKnown RBP13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 ZNF286BP0CG31 522 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 EFHC1Q5JVL4 640 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 ZNF786Q8N393 782 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 OR2W6PQ8NHA6 318 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 RIN2Q8WYP3 895 aaPredicted RBP13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 COL26A1Q96A83 441 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 FAM84BQ96KN1 310 aaPredicted RBP13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 CELF4Q9BZC1 486 aaKnown RBP13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 PHACTR1Q9C0D0 580 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 PSMC3IPQ9P2W1 217 aaPredicted RBP13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 CYB561D2O14569 222 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 USP1O94782 785 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 IL18RAPO95256 599 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 UBTFL6P0CB48 400 aaPredicted RBP13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 CCNG1P51959 295 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 KCNT1Q5JUK3 1230 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 SLC30A9Q6PML9 568 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 ZNF333Q96JL9 665 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 NT5MQ9NPB1 228 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 CPA4Q9UI42 421 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 AXIN2Q9Y2T1 843 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 MOXD2PA6NHM9 499 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 ACSL4O60488 711 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 CLTBP09497 229 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 CTSEP14091 401 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 ZNF23P17027 643 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 TAF6P49848 677 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 TBC1D25Q3MII6 688 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 PEG10Q86TG7 708 aaKnown RBP13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 CALR3Q96L12 384 aaKnown RBP13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 OSBPL8Q9BZF1 889 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 SAE1Q9UBE0 346 aaPredicted RBP13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 TIMM13Q9Y5L4 95 aaPredicted RBP13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 ATP6V1B2P21281 511 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 STX4Q12846 297 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 PRKAA1Q13131 559 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 SEMA4DQ92854 862 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 MYO5CQ9NQX4 1742 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 SMCO3A2RU48 225 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 ACOX1Q15067 660 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 FBXO42Q6P3S6 717 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 LPAR1Q92633 364 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 STAMBPL1Q96FJ0 436 aa13.66□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 GSG1L2A8MUP6 293 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 C19orf81C9J6K1 198 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 HBP1O60381 514 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 FDX1P10109 184 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 NECAB2Q7Z6G3 386 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 SKA1Q96BD8 255 aa13.65□□□□□ -0.22
NPHP3-ACAD11-201ENST00000471702 MTMR12Q9C0I1 747 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms