RNA–Protein interactions for RNA: ENST00000470482.5

HDLBP-232, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-232ENST00000470482 DMAP1Q9NPF5 467 aaPredicted RBP12.44□□□□□ -0.42
HDLBP-232ENST00000470482 POLR3BQ9NW08 1133 aaPredicted RBP12.44□□□□□ -0.42
HDLBP-232ENST00000470482 OSER1Q9NX31 292 aa12.44□□□□□ -0.42
HDLBP-232ENST00000470482 CHORDC1Q9UHD1 332 aaPredicted RBP12.44□□□□□ -0.42
HDLBP-232ENST00000470482 SMG5Q9UPR3 1016 aaKnown RBP12.44□□□□□ -0.42
HDLBP-232ENST00000470482 CPQQ9Y646 472 aa12.44□□□□□ -0.42
HDLBP-232ENST00000470482 USP3Q9Y6I4 520 aa12.44□□□□□ -0.42
HDLBP-232ENST00000470482 MYO16Q9Y6X6 1858 aa12.43□□□□□ -0.42
HDLBP-232ENST00000470482 E2F8A0AVK6 867 aa12.43□□□□□ -0.42
HDLBP-232ENST00000470482 PMM2O15305 246 aa12.43□□□□□ -0.42
HDLBP-232ENST00000470482 AP1G2O75843 785 aa12.43□□□□□ -0.42
HDLBP-232ENST00000470482 CYP17A1P05093 508 aa12.43□□□□□ -0.42
HDLBP-232ENST00000470482 CCDC130P13994 396 aa12.43□□□□□ -0.42
HDLBP-232ENST00000470482 ANXA13P27216 316 aa12.43□□□□□ -0.42
HDLBP-232ENST00000470482 NUCB2P80303 420 aa12.43□□□□□ -0.42
HDLBP-232ENST00000470482 GRSF1Q12849 480 aaKnown RBP eCLIP12.43□□□□□ -0.42
HDLBP-232ENST00000470482 ORC1Q13415 861 aa12.43□□□□□ -0.42
HDLBP-232ENST00000470482 CC2D1AQ6P1N0 951 aaPredicted RBP12.43□□□□□ -0.42
HDLBP-232ENST00000470482 SCARA5Q6ZMJ2 495 aa12.43□□□□□ -0.42
HDLBP-232ENST00000470482 CLEC20AQ6ZU45 233 aa12.43□□□□□ -0.42
HDLBP-232ENST00000470482 GPRIN1Q7Z2K8 1008 aa12.43□□□□□ -0.42
HDLBP-232ENST00000470482 KIAA2013Q8IYS2 634 aa12.43□□□□□ -0.42
HDLBP-232ENST00000470482 CPA6Q8N4T0 437 aa12.43□□□□□ -0.42
HDLBP-232ENST00000470482 UBR7Q8N806 425 aa12.43□□□□□ -0.42
HDLBP-232ENST00000470482 SLC2A14Q8TDB8 520 aa12.43□□□□□ -0.42
HDLBP-232ENST00000470482 EEF2KMTQ96G04 330 aa12.43□□□□□ -0.42
HDLBP-232ENST00000470482 P2RY13Q9BPV8 354 aa12.43□□□□□ -0.42
HDLBP-232ENST00000470482 NIF3L1Q9GZT8 377 aa12.43□□□□□ -0.42
HDLBP-232ENST00000470482 FAM124BQ9H5Z6 455 aaPredicted RBP12.43□□□□□ -0.42
HDLBP-232ENST00000470482 PNPLA8Q9NP80 782 aa12.43□□□□□ -0.42
HDLBP-232ENST00000470482 CYLDQ9NQC7 956 aa12.43□□□□□ -0.42
HDLBP-232ENST00000470482 KIAA1549LQ6ZVL6 1849 aa12.43□□□□□ -0.42
HDLBP-232ENST00000470482 EML5Q05BV3 1969 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 P4HA1P13674 534 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 CD44P16070 742 aaKnown RBP12.42□□□□□ -0.42
HDLBP-232ENST00000470482 KIF11P52732 1056 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 SRSF5Q13243 272 aaKnown RBP12.42□□□□□ -0.42
HDLBP-232ENST00000470482 DHCR24Q15392 516 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 FBXO43Q4G163 708 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 CBWD6Q4V339 395 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 CBWD3Q5JTY5 395 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 CBWD5Q5RIA9 395 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 KRT39Q6A163 491 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 FOXR2Q6PJQ5 311 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 SYT13Q7L8C5 426 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 FILIP1Q7Z7B0 1213 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 SCD5Q86SK9 330 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 SFTPA1Q8IWL2 248 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 ETFBKMTQ8IXQ9 262 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 PDZD8Q8NEN9 1154 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 USP33Q8TEY7 942 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 ERCC4Q92889 916 aaPredicted RBP12.42□□□□□ -0.42
HDLBP-232ENST00000470482 CD101Q93033 1021 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 TATDN2Q93075 761 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 P2RY11Q96G91 374 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 SLITRK1Q96PX8 696 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 KLF16Q9BXK1 252 aaPredicted RBP12.42□□□□□ -0.42
HDLBP-232ENST00000470482 UBXN6Q9BZV1 441 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 CCSER2Q9H7U1 834 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 NMUR1Q9HB89 426 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 HCN2Q9UL51 889 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 SCML2Q9UQR0 700 aa12.42□□□□□ -0.42
HDLBP-232ENST00000470482 MYO18AQ92614 2054 aaKnown RBP12.42□□□□□ -0.42
HDLBP-232ENST00000470482 SPAG17Q6Q759 2223 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 CNOT1A5YKK6 2376 aaKnown RBP12.41□□□□□ -0.42
HDLBP-232ENST00000470482 PPP1R3GB7ZBB8 358 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 RNF40O75150 1001 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 EIF2DP41214 584 aaKnown RBP12.41□□□□□ -0.42
HDLBP-232ENST00000470482 SLC6A11P48066 632 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 IFNAR2P48551 515 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 RAD23BP54727 409 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 AMPD2Q01433 879 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 PPP2R5DQ14738 602 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 HECTD3Q5T447 861 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 LAIR1Q6GTX8 287 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 KLHDC10Q6PID8 442 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 HTR3DQ70Z44 454 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 C12orf40Q86WS4 652 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 CAMKK1Q8N5S9 505 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 SLC4A11Q8NBS3 891 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 LMO3Q8TAP4 145 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 FBXO32Q969P5 355 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 SLC35C1Q96A29 364 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 CCDC47Q96A33 483 aaKnown RBP12.41□□□□□ -0.42
HDLBP-232ENST00000470482 CYFIP2Q96F07 1278 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 ZC3H10Q96K80 434 aaKnown RBP12.41□□□□□ -0.42
HDLBP-232ENST00000470482 ARID3AQ99856 593 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 NT5C1AQ9BXI3 368 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 KRT82Q9NSB4 513 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 FAM49BQ9NUQ9 324 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 RAB20Q9NX57 234 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 GMIPQ9P107 970 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 CFAP97Q9P2B7 532 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 EBF1Q9UH73 591 aa12.41□□□□□ -0.42
HDLBP-232ENST00000470482 CETN3O15182 167 aa12.4□□□□□ -0.42
HDLBP-232ENST00000470482 SLC16A3O15427 465 aaKnown RBP12.4□□□□□ -0.42
HDLBP-232ENST00000470482 LRP3O75074 770 aa12.4□□□□□ -0.42
HDLBP-232ENST00000470482 ATG13O75143 517 aa12.4□□□□□ -0.42
HDLBP-232ENST00000470482 NFATC1O95644 943 aa12.4□□□□□ -0.42
HDLBP-232ENST00000470482 TBX18O95935 607 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms