RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 CLUL1Q15846 466 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 CC2D1AQ6P1N0 951 aaPredicted RBP15.87■□□□□ 0.13
COL4A5-203ENST00000470339 RNF19BQ6ZMZ0 732 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 BEND5Q7L4P6 421 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 CREG2Q8IUH2 290 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 RHOT1Q8IXI2 618 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 CEP112Q8N8E3 955 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 ZNF461Q8TAF7 563 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 RXFP2Q8WXD0 754 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 SPATA17Q96L03 361 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 ULBP1Q9BZM6 244 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 RXFP1Q9HBX9 757 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 MRPL17Q9NRX2 175 aaKnown RBP15.87■□□□□ 0.13
COL4A5-203ENST00000470339 AFF4Q9UHB7 1163 aaKnown RBP15.87■□□□□ 0.13
COL4A5-203ENST00000470339 C5orf67F2Z3F1 127 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 KCNK3O14649 394 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 RB1P06400 928 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 SDC4P31431 198 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 PCK1P35558 622 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 MATKP42679 507 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 TUFMP49411 452 aaKnown RBP15.86■□□□□ 0.13
COL4A5-203ENST00000470339 NDUFV1P49821 464 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 ARPP19P56211 112 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 RNASE9P60153 205 aaKnown RBP15.86■□□□□ 0.13
COL4A5-203ENST00000470339 ROR1Q01973 937 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 UBE3AQ05086 875 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 CKAP4Q07065 602 aaKnown RBP15.86■□□□□ 0.13
COL4A5-203ENST00000470339 TAF5Q15542 800 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 GPRIN1Q7Z2K8 1008 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 POLNQ7Z5Q5 900 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 SCN4BQ8IWT1 228 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 NUP93Q8N1F7 819 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 PIAS4Q8N2W9 510 aaPredicted RBP15.86■□□□□ 0.13
COL4A5-203ENST00000470339 EMC1Q8N766 993 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 KLHL23Q8NBE8 558 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 ATAD1Q8NBU5 361 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 MNS1Q8NEH6 495 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 CLEC4CQ8WTT0 213 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 PIWIL1Q96J94 861 aaKnown RBP15.86■□□□□ 0.13
COL4A5-203ENST00000470339 RNPC3Q96LT9 517 aaKnown RBP15.86■□□□□ 0.13
COL4A5-203ENST00000470339 SAMD11Q96NU1 681 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 SLC2A13Q96QE2 648 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 DDX23Q9BUQ8 820 aaKnown RBP15.86■□□□□ 0.13
COL4A5-203ENST00000470339 ZBP1Q9H171 429 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 FBXO44Q9H4M3 255 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 RRN3Q9NYV6 651 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.86■□□□□ 0.13
COL4A5-203ENST00000470339 IL37Q9NZH6 218 aa15.86■□□□□ 0.13
COL4A5-203ENST00000470339 TTC7AQ9ULT0 858 aaPredicted RBP15.86■□□□□ 0.13
COL4A5-203ENST00000470339 COL4A4P53420 1690 aaPredicted RBP15.86■□□□□ 0.13
COL4A5-203ENST00000470339 MYO16Q9Y6X6 1858 aa15.85■□□□□ 0.13
COL4A5-203ENST00000470339 WDR27A2RRH5 827 aa15.85■□□□□ 0.13
COL4A5-203ENST00000470339 LINC01553A4QN01 128 aa15.85■□□□□ 0.13
COL4A5-203ENST00000470339 RIOK3O14730 519 aaKnown RBP15.85■□□□□ 0.13
COL4A5-203ENST00000470339 SRGAP2O75044 1071 aa15.85■□□□□ 0.13
COL4A5-203ENST00000470339 DAB1O75553 588 aa15.85■□□□□ 0.13
COL4A5-203ENST00000470339 RTN3O95197 1032 aaPredicted RBP15.85■□□□□ 0.13
COL4A5-203ENST00000470339 SLU7O95391 586 aaKnown RBP15.85■□□□□ 0.13
COL4A5-203ENST00000470339 VNN2O95498 520 aa15.85■□□□□ 0.13
COL4A5-203ENST00000470339 NOS2P35228 1153 aa15.85■□□□□ 0.13
COL4A5-203ENST00000470339 FLT3P36888 993 aa15.85■□□□□ 0.13
COL4A5-203ENST00000470339 PAFAH1B1P43034 410 aa15.85■□□□□ 0.13
COL4A5-203ENST00000470339 RWDD2BP57060 319 aa15.85■□□□□ 0.13
COL4A5-203ENST00000470339 TUBB4BP68371 445 aa15.85■□□□□ 0.13
COL4A5-203ENST00000470339 HADHQ16836 314 aaKnown RBP15.85■□□□□ 0.13
COL4A5-203ENST00000470339 CCDC14Q49A88 953 aa15.85■□□□□ 0.13
COL4A5-203ENST00000470339 C9orf50Q5SZB4 431 aa15.85■□□□□ 0.13
COL4A5-203ENST00000470339 TRNP1Q6NT89 227 aa15.85■□□□□ 0.13
COL4A5-203ENST00000470339 ZNF572Q7Z3I7 529 aaPredicted RBP15.85■□□□□ 0.13
COL4A5-203ENST00000470339 RASGEF1CQ8N431 466 aa15.85■□□□□ 0.13
COL4A5-203ENST00000470339 ACTRT1Q8TDG2 376 aa15.85■□□□□ 0.13
COL4A5-203ENST00000470339 COG1Q8WTW3 980 aa15.85■□□□□ 0.13
COL4A5-203ENST00000470339 CENPIQ92674 756 aaPredicted RBP15.85■□□□□ 0.13
COL4A5-203ENST00000470339 NT5C3BQ969T7 300 aa15.85■□□□□ 0.13
COL4A5-203ENST00000470339 RPGRIP1Q96KN7 1286 aa15.85■□□□□ 0.13
COL4A5-203ENST00000470339 PGLYRP2Q96PD5 576 aa15.85■□□□□ 0.13
COL4A5-203ENST00000470339 C11orf84Q9BUA3 381 aaPredicted RBP15.85■□□□□ 0.13
COL4A5-203ENST00000470339 POPDC2Q9HBU9 364 aa15.85■□□□□ 0.13
COL4A5-203ENST00000470339 TMEM51Q9NW97 253 aa15.85■□□□□ 0.13
COL4A5-203ENST00000470339 PCDHA11Q9Y5I1 949 aa15.85■□□□□ 0.13
COL4A5-203ENST00000470339 IRAK3Q9Y616 596 aa15.85■□□□□ 0.13
COL4A5-203ENST00000470339 MTCL1Q9Y4B5 1905 aaKnown RBP15.84■□□□□ 0.13
COL4A5-203ENST00000470339 FAM92AA1XBS5 289 aa15.84■□□□□ 0.13
COL4A5-203ENST00000470339 LCHNA4D1U4 455 aa15.84■□□□□ 0.13
COL4A5-203ENST00000470339 C2CD2LO14523 706 aa15.84■□□□□ 0.13
COL4A5-203ENST00000470339 ADAM12O43184 909 aa15.84■□□□□ 0.13
COL4A5-203ENST00000470339 LRCH4O75427 683 aa15.84■□□□□ 0.13
COL4A5-203ENST00000470339 GRAP2O75791 330 aa15.84■□□□□ 0.13
COL4A5-203ENST00000470339 LTFP02788 710 aa15.84■□□□□ 0.13
COL4A5-203ENST00000470339 KRT7P08729 469 aa15.84■□□□□ 0.13
COL4A5-203ENST00000470339 USP17L7P0C7H9 530 aa15.84■□□□□ 0.13
COL4A5-203ENST00000470339 ATF2P15336 505 aa15.84■□□□□ 0.13
COL4A5-203ENST00000470339 CXCR5P32302 372 aa15.84■□□□□ 0.13
COL4A5-203ENST00000470339 CTNNB1P35222 781 aa15.84■□□□□ 0.13
COL4A5-203ENST00000470339 SLC5A3P53794 718 aa15.84■□□□□ 0.13
COL4A5-203ENST00000470339 TERF1P54274 439 aa15.84■□□□□ 0.13
COL4A5-203ENST00000470339 ITIH3Q06033 890 aa15.84■□□□□ 0.13
COL4A5-203ENST00000470339 DUSP4Q13115 394 aa15.84■□□□□ 0.13
COL4A5-203ENST00000470339 SHHQ15465 462 aa15.84■□□□□ 0.13
COL4A5-203ENST00000470339 PTPROQ16827 1216 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms