RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 DDIT3P35638 169 aa9.74□□□□□ -0.85
CCDC171-204ENST00000470191 TNFRSF4P43489 277 aa9.74□□□□□ -0.85
CCDC171-204ENST00000470191 LHX1P48742 406 aa9.74□□□□□ -0.85
CCDC171-204ENST00000470191 SOWAHAQ2M3V2 549 aa9.74□□□□□ -0.85
CCDC171-204ENST00000470191 ANO4Q32M45 955 aa9.74□□□□□ -0.85
CCDC171-204ENST00000470191 CFAP221Q4G0U5 840 aa9.74□□□□□ -0.85
CCDC171-204ENST00000470191 CCDC157Q569K6 752 aa9.74□□□□□ -0.85
CCDC171-204ENST00000470191 SPDYCQ5MJ68 293 aa9.74□□□□□ -0.85
CCDC171-204ENST00000470191 BTBD8Q5XKL5 378 aa9.74□□□□□ -0.85
CCDC171-204ENST00000470191 CCNI2Q6ZMN8 369 aaPredicted RBP9.74□□□□□ -0.85
CCDC171-204ENST00000470191 C4orf50Q6ZRC1 276 aa9.74□□□□□ -0.85
CCDC171-204ENST00000470191 DENND5BQ6ZUT9 1274 aa9.74□□□□□ -0.85
CCDC171-204ENST00000470191 HS2ST1Q7LGA3 356 aa9.74□□□□□ -0.85
CCDC171-204ENST00000470191 DYMQ7RTS9 669 aa9.74□□□□□ -0.85
CCDC171-204ENST00000470191 SLCO6A1Q86UG4 719 aa9.74□□□□□ -0.85
CCDC171-204ENST00000470191 SFR1Q86XK3 245 aa9.74□□□□□ -0.85
CCDC171-204ENST00000470191 CACTINQ8WUQ7 758 aaKnown RBP9.74□□□□□ -0.85
CCDC171-204ENST00000470191 ADAMTS14Q8WXS8 1223 aa9.74□□□□□ -0.85
CCDC171-204ENST00000470191 FIZ1Q96SL8 496 aa9.74□□□□□ -0.85
CCDC171-204ENST00000470191 PCIF1Q9H4Z3 704 aa9.74□□□□□ -0.85
CCDC171-204ENST00000470191 CRTAC1Q9NQ79 661 aa9.74□□□□□ -0.85
CCDC171-204ENST00000470191 BLOC1S4Q9NUP1 217 aa9.74□□□□□ -0.85
CCDC171-204ENST00000470191 DNAAF2Q9NVR5 837 aaKnown RBP9.74□□□□□ -0.85
CCDC171-204ENST00000470191 APOBEC2Q9Y235 224 aaKnown RBP9.74□□□□□ -0.85
CCDC171-204ENST00000470191 IGSF10Q6WRI0 2623 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 ZNF840PA6NDX5 716 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 F8VP50 259 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 ZBTB24O43167 697 aaPredicted RBP9.73□□□□□ -0.85
CCDC171-204ENST00000470191 TMEM191BP0C7N4 346 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 PYGBP11216 843 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 NDUFV2P19404 249 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 ADSSP30520 456 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 UBA7P41226 1012 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 MAGEA11P43364 429 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 ZNF131P52739 623 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 SLC7A9P82251 487 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 KCNA1Q09470 495 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 TAF10Q12962 218 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 HNRNPDQ14103 355 aaKnown RBP9.73□□□□□ -0.85
CCDC171-204ENST00000470191 HSF5Q4G112 596 aaPredicted RBP9.73□□□□□ -0.85
CCDC171-204ENST00000470191 MDH1BQ5I0G3 518 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 EGFLAMQ63HQ2 1017 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 KIAA1324Q6UXG2 1013 aaKnown RBP9.73□□□□□ -0.85
CCDC171-204ENST00000470191 RABEPKQ7Z6M1 372 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 MIB1Q86YT6 1006 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 RAD54LQ92698 747 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 FUBP3Q96I24 572 aaKnown RBP eCLIP9.73□□□□□ -0.85
CCDC171-204ENST00000470191 MMS19Q96T76 1030 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 ACOX2Q99424 681 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 MTMR12Q9C0I1 747 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 MIR1-1HGQ9H1L0 117 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 IL21RQ9HBE5 538 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 PDE11AQ9HCR9 933 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 RBAKQ9NYW8 714 aaPredicted RBP9.73□□□□□ -0.85
CCDC171-204ENST00000470191 DEC1Q9P2X7 70 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 R3HCC1Q9Y3T6 440 aaKnown RBP9.73□□□□□ -0.85
CCDC171-204ENST00000470191 RAD54BQ9Y620 910 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 TP53BP1Q12888 1972 aaPredicted RBP9.73□□□□□ -0.85
CCDC171-204ENST00000470191 SETXQ7Z333 2677 aaKnown RBP9.73□□□□□ -0.85
CCDC171-204ENST00000470191 FREM2Q5SZK8 3169 aa9.73□□□□□ -0.85
CCDC171-204ENST00000470191 BPTFQ12830 3046 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 A0A1W2PQD8 194 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 MEI4A8MW99 385 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.72□□□□□ -0.85
CCDC171-204ENST00000470191 GABRDO14764 452 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 TULP3O75386 442 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 NTSR1P30989 418 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 EIF2DP41214 584 aaKnown RBP9.72□□□□□ -0.85
CCDC171-204ENST00000470191 CACNA2D1P54289 1103 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 RBP5P82980 135 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 GAD2Q05329 585 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 CYP4F3Q08477 520 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 GRIK2Q13002 908 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 POSTNQ15063 836 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 SYCP2LQ5T4T6 812 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 TDRD10Q5VZ19 366 aaKnown RBP9.72□□□□□ -0.85
CCDC171-204ENST00000470191 SDE2Q6IQ49 451 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 FAM171BQ6P995 826 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 TOGARAM2Q6ZUX3 1019 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 TRMT11Q7Z4G4 463 aaKnown RBP9.72□□□□□ -0.85
CCDC171-204ENST00000470191 NT5DC4Q86YG4 428 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 BRSK2Q8IWQ3 736 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 CHPFQ8IZ52 775 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 SYCP3Q8IZU3 236 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 PHTF2Q8N3S3 785 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 TOP6BLQ8N6T0 577 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 LRRC52Q8N7C0 313 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 KRI1Q8N9T8 703 aaKnown RBP9.72□□□□□ -0.85
CCDC171-204ENST00000470191 KBTBD7Q8WVZ9 684 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 WBP2Q969T9 261 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 RNF166Q96A37 237 aaPredicted RBP9.72□□□□□ -0.85
CCDC171-204ENST00000470191 SPATA17Q96L03 361 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 OCEL1Q9H607 264 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 MRPL44Q9H9J2 332 aaKnown RBP9.72□□□□□ -0.85
CCDC171-204ENST00000470191 PRDM16Q9HAZ2 1276 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 GDAP2Q9NXN4 497 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 SIX4Q9UIU6 781 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 ITGA11Q9UKX5 1188 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 HCN2Q9UL51 889 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 CDH9Q9ULB4 789 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms