RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 VWA3BQ502W6 1294 aa10.27□□□□□ -0.77
SRRT-208ENST00000469602 TCP11X2Q5H9J9 407 aa10.27□□□□□ -0.77
SRRT-208ENST00000469602 MIIPQ5JXC2 388 aa10.27□□□□□ -0.77
SRRT-208ENST00000469602 CC2D1AQ6P1N0 951 aaPredicted RBP10.27□□□□□ -0.77
SRRT-208ENST00000469602 ZNF852Q6ZMS4 543 aa10.27□□□□□ -0.77
SRRT-208ENST00000469602 C11orf57Q6ZUT1 292 aaPredicted RBP10.27□□□□□ -0.77
SRRT-208ENST00000469602 ENOSF1Q7L5Y1 443 aa10.27□□□□□ -0.77
SRRT-208ENST00000469602 RBBP8NLQ8NC74 664 aaPredicted RBP10.27□□□□□ -0.77
SRRT-208ENST00000469602 PJA1Q8NG27 643 aa10.27□□□□□ -0.77
SRRT-208ENST00000469602 SH3RF2Q8TEC5 729 aa10.27□□□□□ -0.77
SRRT-208ENST00000469602 FAM81BQ96LP2 452 aa10.27□□□□□ -0.77
SRRT-208ENST00000469602 FAM83CQ9BQN1 747 aa10.27□□□□□ -0.77
SRRT-208ENST00000469602 UBXN6Q9BZV1 441 aa10.27□□□□□ -0.77
SRRT-208ENST00000469602 FOXQ1Q9C009 403 aa10.27□□□□□ -0.77
SRRT-208ENST00000469602 KCNH6Q9H252 994 aa10.27□□□□□ -0.77
SRRT-208ENST00000469602 NDST4Q9H3R1 872 aa10.27□□□□□ -0.77
SRRT-208ENST00000469602 UBE2TQ9NPD8 197 aaPredicted RBP10.27□□□□□ -0.77
SRRT-208ENST00000469602 TLR8Q9NR97 1041 aaKnown RBP10.27□□□□□ -0.77
SRRT-208ENST00000469602 APEX2Q9UBZ4 518 aa10.27□□□□□ -0.77
SRRT-208ENST00000469602 TSPAN16Q9UKR8 245 aa10.27□□□□□ -0.77
SRRT-208ENST00000469602 CNTN6Q9UQ52 1028 aa10.27□□□□□ -0.77
SRRT-208ENST00000469602 SIT1Q9Y3P8 196 aa10.27□□□□□ -0.77
SRRT-208ENST00000469602 ARIH1Q9Y4X5 557 aaPredicted RBP10.27□□□□□ -0.77
SRRT-208ENST00000469602 PIAS3Q9Y6X2 628 aa10.27□□□□□ -0.77
SRRT-208ENST00000469602 CACNA1IQ9P0X4 2223 aa10.27□□□□□ -0.77
SRRT-208ENST00000469602 SHISA7A6NL88 538 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 O00370 1275 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 MAN2B1O00754 1011 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 XPO1O14980 1071 aaKnown RBP10.26□□□□□ -0.77
SRRT-208ENST00000469602 CYP26A1O43174 497 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 TCF3P15923 654 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 CD72P21854 359 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 PON1P27169 355 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 BCAT1P54687 386 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 MFAP3P55082 362 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 ZXDBP98169 803 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 TYRO3Q06418 890 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 TNK2Q07912 1038 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 BST2Q10589 180 aaKnown RBP10.26□□□□□ -0.77
SRRT-208ENST00000469602 MTF1Q14872 753 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 PDGFRLQ15198 375 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 HECTD3Q5T447 861 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 CDKAL1Q5VV42 579 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 CAVIN1Q6NZI2 390 aaKnown RBP10.26□□□□□ -0.77
SRRT-208ENST00000469602 GJB7Q6PEY0 223 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 LCLAT1Q6UWP7 414 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 PIGZQ86VD9 579 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 TTC30AQ86WT1 665 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 TTC16Q8NEE8 873 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 TFAP2BQ92481 460 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 MSANTD3Q96H12 275 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 PRRX2Q99811 253 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 OSBPL6Q9BZF3 934 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 CCSER2Q9H7U1 834 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 GKN1Q9NS71 199 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 GTSE1Q9NYZ3 720 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 HESX1Q9UBX0 185 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 MRPS17Q9Y2R5 130 aaKnown RBP10.26□□□□□ -0.77
SRRT-208ENST00000469602 CPQQ9Y646 472 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 USP3Q9Y6I4 520 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 MYOFQ9NZM1 2061 aa10.26□□□□□ -0.77
SRRT-208ENST00000469602 FAM170BA6NMN3 283 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 LEFTY2O00292 366 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 COCHO43405 550 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 TLR5O60602 858 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 DCNP07585 359 aaKnown RBP10.25□□□□□ -0.77
SRRT-208ENST00000469602 SETSIPP0DME0 302 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 MBL2P11226 248 aaPredicted RBP10.25□□□□□ -0.77
SRRT-208ENST00000469602 KRT5P13647 590 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 SOX9P48436 509 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 PGFP49763 221 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 KPNA1P52294 538 aaPredicted RBP10.25□□□□□ -0.77
SRRT-208ENST00000469602 MYL5Q02045 173 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 APBA1Q02410 837 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 PDE4CQ08493 712 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 UBXN2BQ14CS0 331 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 STILQ15468 1287 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 CNGA2Q16280 664 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 ITPRIPL2Q3MIP1 535 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 PKDCCQ504Y2 493 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 RAB41Q5JT25 222 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 TRIM68Q6AZZ1 485 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 C1orf228Q6PIY5 440 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 CCDC186Q7Z3E2 898 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 RALGPS2Q86X27 583 aaPredicted RBP10.25□□□□□ -0.77
SRRT-208ENST00000469602 CCDC105Q8IYK2 499 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 KIAA1958Q8N8K9 716 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 TTC8Q8TAM2 541 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 UBA3Q8TBC4 463 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 OSCP1Q8WVF1 389 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 FAM3CQ92520 227 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 NELL2Q99435 816 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 ZSWIM1Q9BR11 485 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 EBF3Q9H4W6 596 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 C8orf33Q9H7E9 229 aaPredicted RBP10.25□□□□□ -0.77
SRRT-208ENST00000469602 LTB4R2Q9NPC1 389 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 SIX2Q9NPC8 291 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 CYLDQ9NQC7 956 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 HPS4Q9NQG7 708 aa10.25□□□□□ -0.77
SRRT-208ENST00000469602 FANCLQ9NW38 375 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms