RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 ANXA2P07355 339 aaKnown RBP3.82□□□□□ -1.8
TPR-204ENST00000469463 ELFN1P0C7U0 828 aa3.82□□□□□ -1.8
TPR-204ENST00000469463 TXNP10599 105 aaKnown RBP3.82□□□□□ -1.8
TPR-204ENST00000469463 IL1R1P14778 569 aa3.82□□□□□ -1.8
TPR-204ENST00000469463 IL1R2P27930 398 aa3.82□□□□□ -1.8
TPR-204ENST00000469463 STT3AP46977 705 aa3.82□□□□□ -1.8
TPR-204ENST00000469463 PGDP52209 483 aa3.82□□□□□ -1.8
TPR-204ENST00000469463 SUMO2P61956 95 aaKnown RBP3.82□□□□□ -1.8
TPR-204ENST00000469463 SLC10A2Q12908 348 aaPredicted RBP3.82□□□□□ -1.8
TPR-204ENST00000469463 PICALMQ13492 652 aa3.82□□□□□ -1.8
TPR-204ENST00000469463 CCNIQ14094 377 aa3.82□□□□□ -1.8
TPR-204ENST00000469463 DAG1Q14118 895 aa3.82□□□□□ -1.8
TPR-204ENST00000469463 L1TD1Q5T7N2 865 aaKnown RBP3.82□□□□□ -1.8
TPR-204ENST00000469463 FCRLBQ6BAA4 426 aa3.82□□□□□ -1.8
TPR-204ENST00000469463 NOL8Q76FK4 1167 aaKnown RBP3.82□□□□□ -1.8
TPR-204ENST00000469463 DTX2Q86UW9 622 aa3.82□□□□□ -1.8
TPR-204ENST00000469463 ZBTB45Q96K62 511 aaPredicted RBP3.82□□□□□ -1.8
TPR-204ENST00000469463 BRIP1Q9BX63 1249 aa3.82□□□□□ -1.8
TPR-204ENST00000469463 KRTAP1-5Q9BYS1 174 aa3.82□□□□□ -1.8
TPR-204ENST00000469463 UNKQ9C0B0 810 aaKnown RBP3.82□□□□□ -1.8
TPR-204ENST00000469463 CHST8Q9H2A9 424 aa3.82□□□□□ -1.8
TPR-204ENST00000469463 HEYLQ9NQ87 328 aaPredicted RBP3.82□□□□□ -1.8
TPR-204ENST00000469463 AQP7P3A6NL99 342 aa3.81□□□□□ -1.8
TPR-204ENST00000469463 FOXN3O00409 490 aaPredicted RBP3.81□□□□□ -1.8
TPR-204ENST00000469463 EXOC3O60645 756 aa3.81□□□□□ -1.8
TPR-204ENST00000469463 DLDP09622 509 aaKnown RBP3.81□□□□□ -1.8
TPR-204ENST00000469463 HOXB6P17509 224 aaKnown RBP3.81□□□□□ -1.8
TPR-204ENST00000469463 RPL17P18621 184 aaKnown RBP3.81□□□□□ -1.8
TPR-204ENST00000469463 PCSK6P29122 969 aa3.81□□□□□ -1.8
TPR-204ENST00000469463 EPHA3P29320 983 aa3.81□□□□□ -1.8
TPR-204ENST00000469463 PTGER1P34995 402 aa3.81□□□□□ -1.8
TPR-204ENST00000469463 PIK3CBP42338 1070 aa3.81□□□□□ -1.8
TPR-204ENST00000469463 PRIM2P49643 509 aa3.81□□□□□ -1.8
TPR-204ENST00000469463 NEK3P51956 506 aa3.81□□□□□ -1.8
TPR-204ENST00000469463 E2F1Q01094 437 aa3.81□□□□□ -1.8
TPR-204ENST00000469463 SRSF7Q16629 238 aaKnown RBP eCLIP3.81□□□□□ -1.8
TPR-204ENST00000469463 IL31Q6EBC2 164 aa3.81□□□□□ -1.8
TPR-204ENST00000469463 SUMO4Q6EEV6 95 aa3.81□□□□□ -1.8
TPR-204ENST00000469463 CEP85Q6P2H3 762 aa3.81□□□□□ -1.8
TPR-204ENST00000469463 SERPINA13PQ6UXR4 307 aa3.81□□□□□ -1.8
TPR-204ENST00000469463 PARS2Q7L3T8 475 aaKnown RBP3.81□□□□□ -1.8
TPR-204ENST00000469463 P3H2Q8IVL5 708 aa3.81□□□□□ -1.8
TPR-204ENST00000469463 CCDC146Q8IYE0 955 aa3.81□□□□□ -1.8
TPR-204ENST00000469463 CCDC150Q8NCX0 1101 aa3.81□□□□□ -1.8
TPR-204ENST00000469463 SOCS4Q8WXH5 440 aa3.81□□□□□ -1.8
TPR-204ENST00000469463 PHKBQ93100 1093 aa3.81□□□□□ -1.8
TPR-204ENST00000469463 STRBPQ96SI9 672 aaKnown RBP3.81□□□□□ -1.8
TPR-204ENST00000469463 DDX21Q9NR30 783 aaKnown RBP eCLIP3.81□□□□□ -1.8
TPR-204ENST00000469463 DUSP22Q9NRW4 184 aa3.81□□□□□ -1.8
TPR-204ENST00000469463 GEMIN8Q9NWZ8 242 aaKnown RBP3.81□□□□□ -1.8
TPR-204ENST00000469463 DNMT3BQ9UBC3 853 aaKnown RBP3.81□□□□□ -1.8
TPR-204ENST00000469463 ADAMTS5Q9UNA0 930 aa3.81□□□□□ -1.8
TPR-204ENST00000469463 CEP83Q9Y592 693 aa3.81□□□□□ -1.8
TPR-204ENST00000469463 MANSC4A6NHS7 340 aaPredicted RBP3.8□□□□□ -1.8
TPR-204ENST00000469463 APOL1O14791 398 aa3.8□□□□□ -1.8
TPR-204ENST00000469463 CD3EAPO15446 510 aaKnown RBP3.8□□□□□ -1.8
TPR-204ENST00000469463 SNX2O60749 519 aa3.8□□□□□ -1.8
TPR-204ENST00000469463 FAM163BP0C2L3 166 aa3.8□□□□□ -1.8
TPR-204ENST00000469463 TRIM27P14373 513 aa3.8□□□□□ -1.8
TPR-204ENST00000469463 JUPP14923 745 aa3.8□□□□□ -1.8
TPR-204ENST00000469463 NTSR1P30989 418 aa3.8□□□□□ -1.8
TPR-204ENST00000469463 CCDC181Q5TID7 509 aa3.8□□□□□ -1.8
TPR-204ENST00000469463 ANKRD16Q6P6B7 361 aa3.8□□□□□ -1.8
TPR-204ENST00000469463 Q6ZWC4 215 aa3.8□□□□□ -1.8
TPR-204ENST00000469463 WDR53Q7Z5U6 358 aaPredicted RBP3.8□□□□□ -1.8
TPR-204ENST00000469463 KRT78Q8N1N4 520 aa3.8□□□□□ -1.8
TPR-204ENST00000469463 TXLNBQ8N3L3 684 aa3.8□□□□□ -1.8
TPR-204ENST00000469463 FSTL5Q8N475 847 aaPredicted RBP3.8□□□□□ -1.8
TPR-204ENST00000469463 SIRT6Q8N6T7 355 aa3.8□□□□□ -1.8
TPR-204ENST00000469463 C11orf44Q8N8P7 122 aa3.8□□□□□ -1.8
TPR-204ENST00000469463 ABHD11Q8NFV4 315 aa3.8□□□□□ -1.8
TPR-204ENST00000469463 PJA1Q8NG27 643 aa3.8□□□□□ -1.8
TPR-204ENST00000469463 DPF1Q92782 380 aa3.8□□□□□ -1.8
TPR-204ENST00000469463 TNIP3Q96KP6 325 aa3.8□□□□□ -1.8
TPR-204ENST00000469463 HIST1H2AAQ96QV6 131 aa3.8□□□□□ -1.8
TPR-204ENST00000469463 MACROD1Q9BQ69 325 aa3.8□□□□□ -1.8
TPR-204ENST00000469463 SEMA4CQ9C0C4 833 aa3.8□□□□□ -1.8
TPR-204ENST00000469463 SERTAD4Q9NUC0 356 aa3.8□□□□□ -1.8
TPR-204ENST00000469463 DLL3Q9NYJ7 618 aa3.8□□□□□ -1.8
TPR-204ENST00000469463 SH2B3Q9UQQ2 575 aa3.8□□□□□ -1.8
TPR-204ENST00000469463 HPSEQ9Y251 543 aa3.8□□□□□ -1.8
TPR-204ENST00000469463 DRG1Q9Y295 367 aaKnown RBP3.8□□□□□ -1.8
TPR-204ENST00000469463 LINC01548A6NM66 108 aa3.79□□□□□ -1.8
TPR-204ENST00000469463 KCNAB3O43448 404 aa3.79□□□□□ -1.8
TPR-204ENST00000469463 GCATO75600 419 aa3.79□□□□□ -1.8
TPR-204ENST00000469463 PRKCBP05771 671 aa3.79□□□□□ -1.8
TPR-204ENST00000469463 IFIT2P09913 472 aaKnown RBP3.79□□□□□ -1.8
TPR-204ENST00000469463 TSHRP16473 764 aa3.79□□□□□ -1.8
TPR-204ENST00000469463 FPR3P25089 353 aa3.79□□□□□ -1.8
TPR-204ENST00000469463 ITPKBP27987 946 aa3.79□□□□□ -1.8
TPR-204ENST00000469463 UQCRC1P31930 480 aa3.79□□□□□ -1.8
TPR-204ENST00000469463 BCAT1P54687 386 aa3.79□□□□□ -1.8
TPR-204ENST00000469463 CYP4F2P78329 520 aa3.79□□□□□ -1.8
TPR-204ENST00000469463 ZNF543Q08ER8 600 aa3.79□□□□□ -1.8
TPR-204ENST00000469463 GRM1Q13255 1194 aa3.79□□□□□ -1.8
TPR-204ENST00000469463 PMS2P11Q13670 270 aa3.79□□□□□ -1.8
TPR-204ENST00000469463 HLTFQ14527 1009 aaKnown RBP eCLIP3.79□□□□□ -1.8
TPR-204ENST00000469463 ZNF750Q32MQ0 723 aa3.79□□□□□ -1.8
TPR-204ENST00000469463 AARS2Q5JTZ9 985 aaKnown RBP3.79□□□□□ -1.8
TPR-204ENST00000469463 PLAG1Q6DJT9 500 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms