RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 C9orf57Q5W0N0 161 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 WSCD1Q658N2 575 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 USP49Q70CQ1 688 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 CHPFQ8IZ52 775 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 ADGRG2Q8IZP9 1017 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 NAT16Q8N8M0 369 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 FSIP1Q8NA03 581 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 TERB1Q8NA31 727 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 SNX21Q969T3 373 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 MED8Q96G25 268 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 MRGPRX1Q96LB2 322 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 PYM1Q9BRP8 204 aaKnown RBP13.54□□□□□ -0.24
HDAC6-217ENST00000469223 HAPLN2Q9GZV7 340 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 BHMT2Q9H2M3 363 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 KMT5AQ9NQR1 393 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 SMPD4Q9NXE4 827 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 NFE2L3Q9Y4A8 694 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 SLCO1B1Q9Y6L6 691 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 FBN2P35556 2912 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 CBX4O00257 560 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 SLC9A3R1O14745 358 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-217ENST00000469223 SLC16A4O15374 487 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 TULP3O75386 442 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 RFPL3O75679 317 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 NFICP08651 508 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 CLTAP09496 248 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 ACTN2P35609 894 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 CSNK1EP49674 416 aaKnown RBP13.53□□□□□ -0.24
HDAC6-217ENST00000469223 PDE6CP51160 858 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 RPL10AP62906 217 aaKnown RBP13.53□□□□□ -0.24
HDAC6-217ENST00000469223 TSPY1Q01534 308 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 ENOX2Q16206 610 aaKnown RBP13.53□□□□□ -0.24
HDAC6-217ENST00000469223 CCDC142Q17RM4 750 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 KIF19Q2TAC6 998 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 INAVAQ3KP66 663 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 TBC1D25Q3MII6 688 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 LY6G5CQ5SRR4 150 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 SPATA1Q5VX52 437 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 RUFY3Q7L099 469 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 DAW1Q8N136 415 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 KCNV2Q8TDN2 545 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 ZFRQ96KR1 1074 aaKnown RBP13.53□□□□□ -0.24
HDAC6-217ENST00000469223 MTMR9Q96QG7 549 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 TM6SF1Q9BZW5 370 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 ZSWIM6Q9HCJ5 1215 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 CFAP97Q9P2B7 532 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 ANKMY1Q9P2S6 941 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 EIF2B4Q9UI10 523 aaKnown RBP13.53□□□□□ -0.24
HDAC6-217ENST00000469223 HEMK1Q9Y5R4 338 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-217ENST00000469223 SNX11Q9Y5W9 270 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 CPQQ9Y646 472 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 CYP46A1Q9Y6A2 500 aa13.53□□□□□ -0.24
HDAC6-217ENST00000469223 ARID1BQ8NFD5 2236 aaPredicted RBP13.52□□□□□ -0.24
HDAC6-217ENST00000469223 TRIM24O15164 1050 aa13.52□□□□□ -0.25
HDAC6-217ENST00000469223 CLDN3O15551 220 aa13.52□□□□□ -0.25
HDAC6-217ENST00000469223 DTNBO60941 627 aa13.52□□□□□ -0.25
HDAC6-217ENST00000469223 HIP1RO75146 1068 aa13.52□□□□□ -0.25
HDAC6-217ENST00000469223 HSP90AA1P07900 732 aaKnown RBP13.52□□□□□ -0.25
HDAC6-217ENST00000469223 RPA1P27694 616 aa13.52□□□□□ -0.25
HDAC6-217ENST00000469223 MCL1Q07820 350 aa13.52□□□□□ -0.25
HDAC6-217ENST00000469223 STRN3Q13033 797 aa13.52□□□□□ -0.25
HDAC6-217ENST00000469223 DNAJC3Q13217 504 aa13.52□□□□□ -0.25
HDAC6-217ENST00000469223 NFE2Q16621 373 aaPredicted RBP13.52□□□□□ -0.25
HDAC6-217ENST00000469223 BROXQ5VW32 411 aa13.52□□□□□ -0.25
HDAC6-217ENST00000469223 JADE1Q6IE81 842 aa13.52□□□□□ -0.25
HDAC6-217ENST00000469223 LAYNQ6UX15 382 aa13.52□□□□□ -0.25
HDAC6-217ENST00000469223 ETFBKMTQ8IXQ9 262 aa13.52□□□□□ -0.25
HDAC6-217ENST00000469223 SNX19Q92543 992 aa13.52□□□□□ -0.25
HDAC6-217ENST00000469223 TMEM60Q9H2L4 133 aa13.52□□□□□ -0.25
HDAC6-217ENST00000469223 WSB2Q9NYS7 404 aaPredicted RBP13.52□□□□□ -0.25
HDAC6-217ENST00000469223 E2F8A0AVK6 867 aa13.51□□□□□ -0.25
HDAC6-217ENST00000469223 PIRO00625 290 aa13.51□□□□□ -0.25
HDAC6-217ENST00000469223 KCNK3O14649 394 aa13.51□□□□□ -0.25
HDAC6-217ENST00000469223 ENC1O14682 589 aa13.51□□□□□ -0.25
HDAC6-217ENST00000469223 UCNP55089 124 aa13.51□□□□□ -0.25
HDAC6-217ENST00000469223 STK3Q13188 491 aa13.51□□□□□ -0.25
HDAC6-217ENST00000469223 C6orf132Q5T0Z8 1188 aa13.51□□□□□ -0.25
HDAC6-217ENST00000469223 SCN4BQ8IWT1 228 aa13.51□□□□□ -0.25
HDAC6-217ENST00000469223 ZNF248Q8NDW4 579 aa13.51□□□□□ -0.25
HDAC6-217ENST00000469223 ERMNQ8TAM6 284 aa13.51□□□□□ -0.25
HDAC6-217ENST00000469223 LEO1Q8WVC0 666 aaPredicted RBP13.51□□□□□ -0.25
HDAC6-217ENST00000469223 TNFRSF25Q93038 417 aa13.51□□□□□ -0.25
HDAC6-217ENST00000469223 FAM212AQ96EL1 285 aa13.51□□□□□ -0.25
HDAC6-217ENST00000469223 GABRG3Q99928 467 aa13.51□□□□□ -0.25
HDAC6-217ENST00000469223 RPF1Q9H9Y2 349 aaKnown RBP13.51□□□□□ -0.25
HDAC6-217ENST00000469223 ABCB6Q9NP58 842 aa13.51□□□□□ -0.25
HDAC6-217ENST00000469223 DEC1Q9P2X7 70 aa13.51□□□□□ -0.25
HDAC6-217ENST00000469223 PCDHGA1Q9Y5H4 931 aa13.51□□□□□ -0.25
HDAC6-217ENST00000469223 ANO9A1A5B4 782 aa13.5□□□□□ -0.25
HDAC6-217ENST00000469223 KCNJ18B7U540 433 aa13.5□□□□□ -0.25
HDAC6-217ENST00000469223 H0Y8X5 98 aa13.5□□□□□ -0.25
HDAC6-217ENST00000469223 TERTO14746 1132 aaKnown RBP13.5□□□□□ -0.25
HDAC6-217ENST00000469223 PCDHGA12O60330 932 aa13.5□□□□□ -0.25
HDAC6-217ENST00000469223 GP1BBP13224 206 aa13.5□□□□□ -0.25
HDAC6-217ENST00000469223 XBP1P17861 261 aa13.5□□□□□ -0.25
HDAC6-217ENST00000469223 PAX3P23760 479 aa13.5□□□□□ -0.25
HDAC6-217ENST00000469223 ACAT1P24752 427 aaKnown RBP13.5□□□□□ -0.25
HDAC6-217ENST00000469223 KRT2P35908 639 aa13.5□□□□□ -0.25
HDAC6-217ENST00000469223 TAF6P49848 677 aa13.5□□□□□ -0.25
HDAC6-217ENST00000469223 AFF3P51826 1226 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms