RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 KCNA3P22001 575 aa6.02□□□□□ -1.45
LSM5-209ENST00000468872 RARRES1P49788 294 aa6.02□□□□□ -1.45
LSM5-209ENST00000468872 GRM1Q13255 1194 aa6.02□□□□□ -1.45
LSM5-209ENST00000468872 RAPGEF1Q13905 1077 aa6.02□□□□□ -1.45
LSM5-209ENST00000468872 KCNAB1Q14722 419 aa6.02□□□□□ -1.45
LSM5-209ENST00000468872 ZNF750Q32MQ0 723 aa6.02□□□□□ -1.45
LSM5-209ENST00000468872 COLEC12Q5KU26 742 aa6.02□□□□□ -1.45
LSM5-209ENST00000468872 CACHD1Q5VU97 1274 aa6.02□□□□□ -1.45
LSM5-209ENST00000468872 CACNA2D3Q8IZS8 1091 aa6.02□□□□□ -1.45
LSM5-209ENST00000468872 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.02□□□□□ -1.45
LSM5-209ENST00000468872 ATG16L2Q8NAA4 619 aa6.02□□□□□ -1.45
LSM5-209ENST00000468872 CCDC150Q8NCX0 1101 aa6.02□□□□□ -1.45
LSM5-209ENST00000468872 SSH3Q8TE77 659 aa6.02□□□□□ -1.45
LSM5-209ENST00000468872 CCT6BQ92526 530 aa6.02□□□□□ -1.45
LSM5-209ENST00000468872 TMEM125Q96AQ2 219 aa6.02□□□□□ -1.45
LSM5-209ENST00000468872 PDLIM2Q96JY6 352 aa6.02□□□□□ -1.45
LSM5-209ENST00000468872 NELL2Q99435 816 aa6.02□□□□□ -1.45
LSM5-209ENST00000468872 PTDSS2Q9BVG9 487 aa6.02□□□□□ -1.45
LSM5-209ENST00000468872 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.02□□□□□ -1.45
LSM5-209ENST00000468872 CXorf36Q9H7Y0 433 aa6.02□□□□□ -1.45
LSM5-209ENST00000468872 NECTIN3Q9NQS3 549 aa6.02□□□□□ -1.45
LSM5-209ENST00000468872 LMTK3Q96Q04 1460 aa6.02□□□□□ -1.45
LSM5-209ENST00000468872 SPATA31A3Q5VYP0 1347 aa6.01□□□□□ -1.45
LSM5-209ENST00000468872 TRGV11A0A075B6L2 103 aa6.01□□□□□ -1.45
LSM5-209ENST00000468872 CCDC189A1A4V9 331 aa6.01□□□□□ -1.45
LSM5-209ENST00000468872 PIAS2O75928 621 aa6.01□□□□□ -1.45
LSM5-209ENST00000468872 NPTX2P47972 431 aa6.01□□□□□ -1.45
LSM5-209ENST00000468872 RPS7P62081 194 aaKnown RBP6.01□□□□□ -1.45
LSM5-209ENST00000468872 SATB1Q01826 763 aa6.01□□□□□ -1.45
LSM5-209ENST00000468872 FPGSQ05932 587 aa6.01□□□□□ -1.45
LSM5-209ENST00000468872 SPARCL1Q14515 664 aa6.01□□□□□ -1.45
LSM5-209ENST00000468872 PTCHD3Q3KNS1 767 aa6.01□□□□□ -1.45
LSM5-209ENST00000468872 RBM20Q5T481 1227 aaKnown RBP6.01□□□□□ -1.45
LSM5-209ENST00000468872 VPS53Q5VIR6 699 aa6.01□□□□□ -1.45
LSM5-209ENST00000468872 RAP1GAP2Q684P5 730 aa6.01□□□□□ -1.45
LSM5-209ENST00000468872 SP5Q6BEB4 398 aaPredicted RBP6.01□□□□□ -1.45
LSM5-209ENST00000468872 USP17L6PQ6QN14 398 aa6.01□□□□□ -1.45
LSM5-209ENST00000468872 LDHAL6AQ6ZMR3 332 aa6.01□□□□□ -1.45
LSM5-209ENST00000468872 FAM9AQ8IZU1 332 aaPredicted RBP6.01□□□□□ -1.45
LSM5-209ENST00000468872 SPATA5Q8NB90 893 aa6.01□□□□□ -1.45
LSM5-209ENST00000468872 ACTRT2Q8TDY3 377 aa6.01□□□□□ -1.45
LSM5-209ENST00000468872 PPM1EQ8WY54 764 aa6.01□□□□□ -1.45
LSM5-209ENST00000468872 EVI5LQ96CN4 794 aa6.01□□□□□ -1.45
LSM5-209ENST00000468872 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.01□□□□□ -1.45
LSM5-209ENST00000468872 PCDHAC1Q9H158 963 aa6.01□□□□□ -1.45
LSM5-209ENST00000468872 MAGEH1Q9H213 219 aa6.01□□□□□ -1.45
LSM5-209ENST00000468872 GRHPRQ9UBQ7 328 aa6.01□□□□□ -1.45
LSM5-209ENST00000468872 NDRG4Q9ULP0 352 aaKnown RBP6.01□□□□□ -1.45
LSM5-209ENST00000468872 AQP7P3A6NL99 342 aa6□□□□□ -1.45
LSM5-209ENST00000468872 F5H697 171 aa6□□□□□ -1.45
LSM5-209ENST00000468872 SYT5O00445 386 aa6□□□□□ -1.45
LSM5-209ENST00000468872 ACKR2O00590 384 aa6□□□□□ -1.45
LSM5-209ENST00000468872 PIP5K1BO14986 540 aa6□□□□□ -1.45
LSM5-209ENST00000468872 TLR5O60602 858 aa6□□□□□ -1.45
LSM5-209ENST00000468872 RASAL1O95294 804 aa6□□□□□ -1.45
LSM5-209ENST00000468872 VEGFAP15692 232 aaPredicted RBP6□□□□□ -1.45
LSM5-209ENST00000468872 EGR1P18146 543 aa6□□□□□ -1.45
LSM5-209ENST00000468872 GATA3P23771 443 aa6□□□□□ -1.45
LSM5-209ENST00000468872 PPIFP30405 207 aaKnown RBP6□□□□□ -1.45
LSM5-209ENST00000468872 ATICP31939 592 aa6□□□□□ -1.45
LSM5-209ENST00000468872 HLXQ14774 488 aaPredicted RBP6□□□□□ -1.45
LSM5-209ENST00000468872 PREPLQ4J6C6 727 aaPredicted RBP6□□□□□ -1.45
LSM5-209ENST00000468872 ARHGAP15Q53QZ3 475 aa6□□□□□ -1.45
LSM5-209ENST00000468872 TMTC4Q5T4D3 741 aa6□□□□□ -1.45
LSM5-209ENST00000468872 ARHGAP40Q5TG30 622 aa6□□□□□ -1.45
LSM5-209ENST00000468872 MICALCLQ6ZW33 695 aa6□□□□□ -1.45
LSM5-209ENST00000468872 CCDC28AQ8IWP9 274 aa6□□□□□ -1.45
LSM5-209ENST00000468872 FAM109AQ8N4B1 249 aa6□□□□□ -1.45
LSM5-209ENST00000468872 SMCR8Q8TEV9 937 aaPredicted RBP6□□□□□ -1.45
LSM5-209ENST00000468872 STYXQ8WUJ0 223 aa6□□□□□ -1.45
LSM5-209ENST00000468872 SNX19Q92543 992 aa6□□□□□ -1.45
LSM5-209ENST00000468872 PPP2R3CQ969Q6 453 aa6□□□□□ -1.45
LSM5-209ENST00000468872 MYLK2Q9H1R3 596 aa6□□□□□ -1.45
LSM5-209ENST00000468872 FAM83DQ9H4H8 585 aa6□□□□□ -1.45
LSM5-209ENST00000468872 DACT1Q9NYF0 836 aa6□□□□□ -1.45
LSM5-209ENST00000468872 ZMYND8Q9ULU4 1186 aaPredicted RBP6□□□□□ -1.45
LSM5-209ENST00000468872 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6□□□□□ -1.45
LSM5-209ENST00000468872 A0A0B4J269 797 aa5.99□□□□□ -1.45
LSM5-209ENST00000468872 PEX1O43933 1283 aa5.99□□□□□ -1.45
LSM5-209ENST00000468872 SRGAP2O75044 1071 aa5.99□□□□□ -1.45
LSM5-209ENST00000468872 IGLV2-14P01704 120 aa5.99□□□□□ -1.45
LSM5-209ENST00000468872 FGAP02671 866 aa5.99□□□□□ -1.45
LSM5-209ENST00000468872 CSF1RP07333 972 aa5.99□□□□□ -1.45
LSM5-209ENST00000468872 IDEP14735 1019 aa5.99□□□□□ -1.45
LSM5-209ENST00000468872 PECAM1P16284 738 aaPredicted RBP5.99□□□□□ -1.45
LSM5-209ENST00000468872 CD6P30203 668 aa5.99□□□□□ -1.45
LSM5-209ENST00000468872 SERPINF1P36955 418 aa5.99□□□□□ -1.45
LSM5-209ENST00000468872 CACNA2D1P54289 1103 aa5.99□□□□□ -1.45
LSM5-209ENST00000468872 PRKAG1P54619 331 aa5.99□□□□□ -1.45
LSM5-209ENST00000468872 TUBB3Q13509 450 aa5.99□□□□□ -1.45
LSM5-209ENST00000468872 PTK2BQ14289 1009 aa5.99□□□□□ -1.45
LSM5-209ENST00000468872 SF3B3Q15393 1217 aaKnown RBP5.99□□□□□ -1.45
LSM5-209ENST00000468872 MAPKAPK3Q16644 382 aa5.99□□□□□ -1.45
LSM5-209ENST00000468872 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.99□□□□□ -1.45
LSM5-209ENST00000468872 MANEALQ5VSG8 457 aa5.99□□□□□ -1.45
LSM5-209ENST00000468872 RGS7BPQ6MZT1 257 aaPredicted RBP5.99□□□□□ -1.45
LSM5-209ENST00000468872 DNAJB14Q8TBM8 379 aa5.99□□□□□ -1.45
LSM5-209ENST00000468872 FAM71BQ8TC56 605 aa5.99□□□□□ -1.45
LSM5-209ENST00000468872 SCLT1Q96NL6 688 aa5.99□□□□□ -1.45
LSM5-209ENST00000468872 OSBPL9Q96SU4 736 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms