RNA–Protein interactions for RNA: ENST00000468646.6

LINC00877-203, long intergenic non-protein coding RNA 877, humanhuman

TSL 2 BASIC

Gene LINC00877, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00877-203ENST00000468646 RAD23BP54727 409 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 BASP1P80723 227 aaKnown RBP12.28□□□□□ -0.44
LINC00877-203ENST00000468646 MRPS35P82673 323 aaKnown RBP12.28□□□□□ -0.44
LINC00877-203ENST00000468646 TNFAIP2Q03169 654 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 PTPN11Q06124 597 aaPredicted RBP12.28□□□□□ -0.44
LINC00877-203ENST00000468646 POU5F1BQ06416 359 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 ZNF394Q53GI3 561 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 ATG16L1Q676U5 607 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 ZNF449Q6P9G9 518 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 JOSD2Q8TAC2 188 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 SKA1Q96BD8 255 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 TBCBQ99426 244 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 RPF1Q9H9Y2 349 aaKnown RBP12.28□□□□□ -0.44
LINC00877-203ENST00000468646 METTL5Q9NRN9 209 aaKnown RBP12.28□□□□□ -0.44
LINC00877-203ENST00000468646 TNFSF13BQ9Y275 285 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 MGAMO43451 1857 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 TCRBV9S1A1TA0A576 114 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 CXCL11O14625 94 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 SNX16P57768 344 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 BOLA3Q53S33 107 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 DARS2Q6PI48 645 aaKnown RBP12.28□□□□□ -0.44
LINC00877-203ENST00000468646 C4orf50Q6ZRC1 276 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 UNC45BQ8IWX7 931 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 LRRC71Q8N4P6 559 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 FAM71DQ8N9W8 422 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 TEKT4Q8WW24 435 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 CNKSR2Q8WXI2 1034 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 ACSF2Q96CM8 615 aaPredicted RBP12.28□□□□□ -0.44
LINC00877-203ENST00000468646 PTCD3Q96EY7 689 aaKnown RBP12.28□□□□□ -0.44
LINC00877-203ENST00000468646 C7orf26Q96N11 449 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 SIKE1Q9BRV8 207 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 ASCC2Q9H1I8 757 aaPredicted RBP12.28□□□□□ -0.44
LINC00877-203ENST00000468646 CDT1Q9H211 546 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 IFT122Q9HBG6 1241 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 KCNK4Q9NYG8 393 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 CNTN3Q9P232 1028 aa12.28□□□□□ -0.44
LINC00877-203ENST00000468646 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.28□□□□□ -0.44
LINC00877-203ENST00000468646 NOP56O00567 594 aaKnown RBP12.27□□□□□ -0.45
LINC00877-203ENST00000468646 HGSO14964 777 aaPredicted RBP12.27□□□□□ -0.45
LINC00877-203ENST00000468646 HBP1O60381 514 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 SMNDC1O75940 238 aaKnown RBP eCLIP12.27□□□□□ -0.45
LINC00877-203ENST00000468646 STAU1O95793 577 aaKnown RBP12.27□□□□□ -0.45
LINC00877-203ENST00000468646 SNRPAP09012 282 aaKnown RBP12.27□□□□□ -0.45
LINC00877-203ENST00000468646 GPD1P21695 349 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 EPHB2P29323 1055 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 ELK3P41970 407 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 MBTD1Q05BQ5 628 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 FAM187BQ17R55 369 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 SMTNL2Q2TAL5 461 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 HSDL1Q3SXM5 330 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 SH2D5Q6ZV89 423 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 MCUQ8NE86 351 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.27□□□□□ -0.45
LINC00877-203ENST00000468646 TMEM176AQ96HP8 235 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 ADPGKQ9BRR6 497 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 WDR83Q9BRX9 315 aaKnown RBP12.27□□□□□ -0.45
LINC00877-203ENST00000468646 KLC2Q9H0B6 622 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 SMARCAD1Q9H4L7 1026 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 ASB7Q9H672 318 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 I3L4J1 428 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 COPEO14579 308 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 CILPO75339 1184 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 CBX6O95503 412 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 FGFR1P11362 822 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 CNTFP26441 200 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 ZBTB16Q05516 673 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 EEF1DP3Q658K8 133 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 LRRC6Q86X45 466 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 TRIM50Q86XT4 487 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 NT5DC4Q86YG4 428 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 IFNLR1Q8IU57 520 aaPredicted RBP12.27□□□□□ -0.45
LINC00877-203ENST00000468646 CPXM1Q96SM3 734 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 CALN1Q9BXU9 219 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.27□□□□□ -0.45
LINC00877-203ENST00000468646 HEY2Q9UBP5 337 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 CHMP2BQ9UQN3 213 aa12.27□□□□□ -0.45
LINC00877-203ENST00000468646 BCLAF3A2AJT9 711 aaKnown RBP12.26□□□□□ -0.45
LINC00877-203ENST00000468646 DPYSL4O14531 572 aa12.26□□□□□ -0.45
LINC00877-203ENST00000468646 GYG2O15488 501 aa12.26□□□□□ -0.45
LINC00877-203ENST00000468646 CAPN15O75808 1086 aa12.26□□□□□ -0.45
LINC00877-203ENST00000468646 KRT38O76015 456 aa12.26□□□□□ -0.45
LINC00877-203ENST00000468646 ERBB2P04626 1255 aa12.26□□□□□ -0.45
LINC00877-203ENST00000468646 DLDP09622 509 aaKnown RBP12.26□□□□□ -0.45
LINC00877-203ENST00000468646 NEFHP12036 1026 aa12.26□□□□□ -0.45
LINC00877-203ENST00000468646 PRKCHP24723 683 aa12.26□□□□□ -0.45
LINC00877-203ENST00000468646 CCNFP41002 786 aa12.26□□□□□ -0.45
LINC00877-203ENST00000468646 IREB2P48200 963 aaKnown RBP12.26□□□□□ -0.45
LINC00877-203ENST00000468646 SERPINB9P50453 376 aa12.26□□□□□ -0.45
LINC00877-203ENST00000468646 EFTUD2Q15029 972 aaKnown RBP eCLIP12.26□□□□□ -0.45
LINC00877-203ENST00000468646 KCNT1Q5JUK3 1230 aa12.26□□□□□ -0.45
LINC00877-203ENST00000468646 SCARA5Q6ZMJ2 495 aa12.26□□□□□ -0.45
LINC00877-203ENST00000468646 CYS1Q717R9 158 aa12.26□□□□□ -0.45
LINC00877-203ENST00000468646 ERO1BQ86YB8 467 aa12.26□□□□□ -0.45
LINC00877-203ENST00000468646 DHX37Q8IY37 1157 aaKnown RBP12.26□□□□□ -0.45
LINC00877-203ENST00000468646 MRRFQ96E11 262 aaKnown RBP12.26□□□□□ -0.45
LINC00877-203ENST00000468646 SPATA33Q96N06 139 aa12.26□□□□□ -0.45
LINC00877-203ENST00000468646 DENND2DQ9H6A0 471 aaPredicted RBP12.26□□□□□ -0.45
LINC00877-203ENST00000468646 PRMT7Q9NVM4 692 aaPredicted RBP12.26□□□□□ -0.45
LINC00877-203ENST00000468646 SORCS3Q9UPU3 1222 aa12.26□□□□□ -0.45
LINC00877-203ENST00000468646 KCNH4Q9UQ05 1017 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms