RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 TNFRSF4P43489 277 aa13.92□□□□□ -0.18
PTPN7-207ENST00000468385 MAPK8P45983 427 aa13.92□□□□□ -0.18
PTPN7-207ENST00000468385 CEBPZQ03701 1054 aaKnown RBP13.92□□□□□ -0.18
PTPN7-207ENST00000468385 IFRD2Q12894 506 aaPredicted RBP13.92□□□□□ -0.18
PTPN7-207ENST00000468385 LY6G5CQ5SRR4 150 aa13.92□□□□□ -0.18
PTPN7-207ENST00000468385 KIAA1211LQ6NV74 962 aa13.92□□□□□ -0.18
PTPN7-207ENST00000468385 SLC23A3Q6PIS1 610 aa13.92□□□□□ -0.18
PTPN7-207ENST00000468385 DDX42Q86XP3 938 aaKnown RBP eCLIP13.92□□□□□ -0.18
PTPN7-207ENST00000468385 CCDC65Q8IXS2 484 aa13.92□□□□□ -0.18
PTPN7-207ENST00000468385 OR6B3Q8NGW1 331 aa13.92□□□□□ -0.18
PTPN7-207ENST00000468385 HMGB4Q8WW32 186 aa13.92□□□□□ -0.18
PTPN7-207ENST00000468385 ZFRQ96KR1 1074 aaKnown RBP13.92□□□□□ -0.18
PTPN7-207ENST00000468385 SLITRK1Q96PX8 696 aa13.92□□□□□ -0.18
PTPN7-207ENST00000468385 ELOVL4Q9GZR5 314 aa13.92□□□□□ -0.18
PTPN7-207ENST00000468385 SNX25Q9H3E2 840 aa13.92□□□□□ -0.18
PTPN7-207ENST00000468385 BCCIPQ9P287 314 aaKnown RBP eCLIP13.92□□□□□ -0.18
PTPN7-207ENST00000468385 TBC1D14Q9P2M4 693 aa13.92□□□□□ -0.18
PTPN7-207ENST00000468385 PILRBQ9UKJ0 227 aa13.92□□□□□ -0.18
PTPN7-207ENST00000468385 MORC2Q9Y6X9 1032 aaPredicted RBP13.92□□□□□ -0.18
PTPN7-207ENST00000468385 TCRBV21S2A2A0A5A6 115 aa13.91□□□□□ -0.18
PTPN7-207ENST00000468385 E2F8A0AVK6 867 aa13.91□□□□□ -0.18
PTPN7-207ENST00000468385 CLDN5O00501 218 aa13.91□□□□□ -0.18
PTPN7-207ENST00000468385 ABCB7O75027 752 aa13.91□□□□□ -0.18
PTPN7-207ENST00000468385 FAM163BP0C2L3 166 aa13.91□□□□□ -0.18
PTPN7-207ENST00000468385 GAD2Q05329 585 aa13.91□□□□□ -0.18
PTPN7-207ENST00000468385 CUL4AQ13619 759 aa13.91□□□□□ -0.18
PTPN7-207ENST00000468385 BYSLQ13895 437 aaKnown RBP13.91□□□□□ -0.18
PTPN7-207ENST00000468385 LYSMD4Q5XG99 296 aa13.91□□□□□ -0.18
PTPN7-207ENST00000468385 PIP4P1Q86T03 277 aa13.91□□□□□ -0.18
PTPN7-207ENST00000468385 ETFBKMTQ8IXQ9 262 aa13.91□□□□□ -0.18
PTPN7-207ENST00000468385 NUP93Q8N1F7 819 aa13.91□□□□□ -0.18
PTPN7-207ENST00000468385 PGBD3Q8N328 593 aa13.91□□□□□ -0.18
PTPN7-207ENST00000468385 CGRRF1Q99675 332 aa13.91□□□□□ -0.18
PTPN7-207ENST00000468385 B3GNT5Q9BYG0 378 aa13.91□□□□□ -0.18
PTPN7-207ENST00000468385 SLC32A1Q9H598 525 aa13.91□□□□□ -0.18
PTPN7-207ENST00000468385 KIAA1586Q9HCI6 787 aa13.91□□□□□ -0.18
PTPN7-207ENST00000468385 FSCN3Q9NQT6 498 aa13.91□□□□□ -0.18
PTPN7-207ENST00000468385 HCN2Q9UL51 889 aa13.91□□□□□ -0.18
PTPN7-207ENST00000468385 PLXND1Q9Y4D7 1925 aa13.91□□□□□ -0.18
PTPN7-207ENST00000468385 ASCC3Q8N3C0 2202 aaKnown RBP13.91□□□□□ -0.18
PTPN7-207ENST00000468385 MYOFQ9NZM1 2061 aa13.91□□□□□ -0.18
PTPN7-207ENST00000468385 SRRM3A6NNA2 597 aaPredicted RBP13.9□□□□□ -0.18
PTPN7-207ENST00000468385 UPK3BL1B0FP48 263 aa13.9□□□□□ -0.18
PTPN7-207ENST00000468385 UPK3BL2E5RIL1 263 aa13.9□□□□□ -0.18
PTPN7-207ENST00000468385 TGFB1I1O43294 461 aa13.9□□□□□ -0.18
PTPN7-207ENST00000468385 COCHO43405 550 aa13.9□□□□□ -0.18
PTPN7-207ENST00000468385 HYAL3O43820 417 aaPredicted RBP13.9□□□□□ -0.18
PTPN7-207ENST00000468385 DLATP10515 647 aaKnown RBP13.9□□□□□ -0.18
PTPN7-207ENST00000468385 HOXB3P14651 431 aaPredicted RBP13.9□□□□□ -0.18
PTPN7-207ENST00000468385 ITPKAP23677 461 aa13.9□□□□□ -0.18
PTPN7-207ENST00000468385 YWHAQP27348 245 aa13.9□□□□□ -0.18
PTPN7-207ENST00000468385 DPP6P42658 865 aa13.9□□□□□ -0.18
PTPN7-207ENST00000468385 TNNC1P63316 161 aa13.9□□□□□ -0.18
PTPN7-207ENST00000468385 SEMA3BQ13214 749 aa13.9□□□□□ -0.18
PTPN7-207ENST00000468385 SNRNP35Q16560 246 aaKnown RBP13.9□□□□□ -0.18
PTPN7-207ENST00000468385 WDR72Q3MJ13 1102 aa13.9□□□□□ -0.18
PTPN7-207ENST00000468385 STXBP4Q6ZWJ1 553 aa13.9□□□□□ -0.18
PTPN7-207ENST00000468385 EPM2AIP1Q7L775 607 aaPredicted RBP13.9□□□□□ -0.18
PTPN7-207ENST00000468385 PDILTQ8N807 584 aa13.9□□□□□ -0.18
PTPN7-207ENST00000468385 NAT16Q8N8M0 369 aa13.9□□□□□ -0.18
PTPN7-207ENST00000468385 RDH13Q8NBN7 331 aa13.9□□□□□ -0.18
PTPN7-207ENST00000468385 B3GALNT2Q8NCR0 500 aa13.9□□□□□ -0.18
PTPN7-207ENST00000468385 PDZD8Q8NEN9 1154 aa13.9□□□□□ -0.18
PTPN7-207ENST00000468385 OVCA2Q8WZ82 227 aa13.9□□□□□ -0.18
PTPN7-207ENST00000468385 FBXO32Q969P5 355 aa13.9□□□□□ -0.18
PTPN7-207ENST00000468385 OTUB2Q96DC9 234 aa13.9□□□□□ -0.18
PTPN7-207ENST00000468385 GZF1Q9H116 711 aaPredicted RBP13.9□□□□□ -0.18
PTPN7-207ENST00000468385 NEUROG3Q9Y4Z2 214 aa13.9□□□□□ -0.18
PTPN7-207ENST00000468385 FAM208BQ5VWN6 2430 aa13.9□□□□□ -0.18
PTPN7-207ENST00000468385 SPAARA0A1B0GVQ0 90 aa13.89□□□□□ -0.19
PTPN7-207ENST00000468385 TBC1D3BA6NDS4 549 aa13.89□□□□□ -0.19
PTPN7-207ENST00000468385 A8MXQ7 604 aa13.89□□□□□ -0.19
PTPN7-207ENST00000468385 EIF3DO15371 548 aaKnown RBP eCLIP13.89□□□□□ -0.19
PTPN7-207ENST00000468385 HOXC11O43248 304 aaPredicted RBP13.89□□□□□ -0.19
PTPN7-207ENST00000468385 TULP3O75386 442 aa13.89□□□□□ -0.19
PTPN7-207ENST00000468385 RTN3O95197 1032 aaPredicted RBP13.89□□□□□ -0.19
PTPN7-207ENST00000468385 STAU1O95793 577 aaKnown RBP13.89□□□□□ -0.19
PTPN7-207ENST00000468385 GABRG2P18507 467 aa13.89□□□□□ -0.19
PTPN7-207ENST00000468385 TNNI1P19237 187 aa13.89□□□□□ -0.19
PTPN7-207ENST00000468385 HOXD12P35452 270 aa13.89□□□□□ -0.19
PTPN7-207ENST00000468385 CYP24A1Q07973 514 aa13.89□□□□□ -0.19
PTPN7-207ENST00000468385 PSMD6Q15008 389 aa13.89□□□□□ -0.19
PTPN7-207ENST00000468385 SLC39A14Q15043 492 aa13.89□□□□□ -0.19
PTPN7-207ENST00000468385 HECTD3Q5T447 861 aa13.89□□□□□ -0.19
PTPN7-207ENST00000468385 SNX30Q5VWJ9 437 aa13.89□□□□□ -0.19
PTPN7-207ENST00000468385 BBS7Q8IWZ6 715 aa13.89□□□□□ -0.19
PTPN7-207ENST00000468385 DEFB119Q8N690 84 aa13.89□□□□□ -0.19
PTPN7-207ENST00000468385 ZNF513Q8N8E2 541 aaPredicted RBP13.89□□□□□ -0.19
PTPN7-207ENST00000468385 ZNF507Q8TCN5 953 aa13.89□□□□□ -0.19
PTPN7-207ENST00000468385 KCNV2Q8TDN2 545 aa13.89□□□□□ -0.19
PTPN7-207ENST00000468385 ZCCHC14Q8WYQ9 949 aaKnown RBP13.89□□□□□ -0.19
PTPN7-207ENST00000468385 ZNF516Q92618 1163 aa13.89□□□□□ -0.19
PTPN7-207ENST00000468385 WBP2Q969T9 261 aa13.89□□□□□ -0.19
PTPN7-207ENST00000468385 CCDC127Q96BQ5 260 aa13.89□□□□□ -0.19
PTPN7-207ENST00000468385 USP28Q96RU2 1077 aa13.89□□□□□ -0.19
PTPN7-207ENST00000468385 KCNK16Q96T55 309 aa13.89□□□□□ -0.19
PTPN7-207ENST00000468385 DUSP9Q99956 384 aaKnown RBP13.89□□□□□ -0.19
PTPN7-207ENST00000468385 XYLT2Q9H1B5 865 aa13.89□□□□□ -0.19
PTPN7-207ENST00000468385 TNMDQ9H2S6 317 aa13.89□□□□□ -0.19
PTPN7-207ENST00000468385 CAPN10Q9HC96 672 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms