RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 MAGED2Q9UNF1 606 aaPredicted RBP11.84□□□□□ -0.51
COL4A6-205ENST00000468338 MYH10P35580 1976 aa11.84□□□□□ -0.51
COL4A6-205ENST00000468338 PIEZO1Q92508 2521 aa11.84□□□□□ -0.51
COL4A6-205ENST00000468338 WDFY4Q6ZS81 3184 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 KANSL1LA0AUZ9 987 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 FAM92AA1XBS5 289 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 TNFRSF10BO14763 440 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 CILPO75339 1184 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 GLULP15104 373 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 ANXA13P27216 316 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 GDI1P31150 447 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 PPP3CCP48454 512 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 PAK1Q13153 545 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 CAMK4Q16566 473 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 KLHL10Q6JEL2 608 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 TRIM59Q8IWR1 403 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 TTC39CQ8N584 583 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 CELF5Q8N6W0 485 aaKnown RBP11.83□□□□□ -0.52
COL4A6-205ENST00000468338 MAB21L3Q8N8X9 362 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 CCDC150Q8NCX0 1101 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 ZMIZ2Q8NF64 920 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 BPIFB1Q8TDL5 484 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 USP13Q92995 863 aaPredicted RBP11.83□□□□□ -0.52
COL4A6-205ENST00000468338 SMARCD1Q96GM5 515 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 SLC22A12Q96S37 553 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 KCNK16Q96T55 309 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 HNRNPABQ99729 332 aaKnown RBP11.83□□□□□ -0.52
COL4A6-205ENST00000468338 NT5C1AQ9BXI3 368 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 CLSTN2Q9H4D0 955 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 MMRN2Q9H8L6 949 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 DNAAF2Q9NVR5 837 aaKnown RBP11.83□□□□□ -0.52
COL4A6-205ENST00000468338 TICRRQ7Z2Z1 1910 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 COL4A3Q01955 1670 aa11.83□□□□□ -0.52
COL4A6-205ENST00000468338 MIA3Q5JRA6 1907 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 ZNF840PA6NDX5 716 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 ZNF263O14978 683 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 P4HA2O15460 535 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 BEST1O76090 585 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 GNA14O95837 355 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 OLFM2O95897 454 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 TCF3P15923 654 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 PLA2G5P39877 138 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 FMO5P49326 533 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 FZD5Q13467 585 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 SWI5Q1ZZU3 235 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 ARHGAP29Q52LW3 1261 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 DCAF17Q5H9S7 520 aaPredicted RBP11.82□□□□□ -0.52
COL4A6-205ENST00000468338 TCERG1LQ5VWI1 586 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 SNX30Q5VWJ9 437 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 CCDC105Q8IYK2 499 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 NUP93Q8N1F7 819 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 C12orf29Q8N999 325 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 PJA1Q8NG27 643 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 LMO3Q8TAP4 145 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 RIN3Q8TB24 985 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 SLC2A14Q8TDB8 520 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 CLDN23Q96B33 292 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 NELL2Q99435 816 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 SMOQ99835 787 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 FAM83CQ9BQN1 747 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 FOXQ1Q9C009 403 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 KIF9Q9HAQ2 790 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 LTB4R2Q9NPC1 389 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 DMAP1Q9NPF5 467 aaPredicted RBP11.82□□□□□ -0.52
COL4A6-205ENST00000468338 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.82□□□□□ -0.52
COL4A6-205ENST00000468338 HEBP1Q9NRV9 189 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 TDP1Q9NUW8 608 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 COMMD8Q9NX08 183 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 RWDD2AQ9UIY3 292 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 CTNND2Q9UQB3 1225 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 CCL26Q9Y258 94 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 SIT1Q9Y3P8 196 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 ATP8B3O60423 1300 aa11.82□□□□□ -0.52
COL4A6-205ENST00000468338 PATJQ8NI35 1801 aa11.81□□□□□ -0.52
COL4A6-205ENST00000468338 RTN3O95197 1032 aaPredicted RBP11.81□□□□□ -0.52
COL4A6-205ENST00000468338 ZDHHC11BP0C7U3 371 aa11.81□□□□□ -0.52
COL4A6-205ENST00000468338 CCDC130P13994 396 aa11.81□□□□□ -0.52
COL4A6-205ENST00000468338 AVPR1AP37288 418 aa11.81□□□□□ -0.52
COL4A6-205ENST00000468338 RAD23BP54727 409 aa11.81□□□□□ -0.52
COL4A6-205ENST00000468338 PTPN5P54829 565 aa11.81□□□□□ -0.52
COL4A6-205ENST00000468338 STX17P56962 302 aa11.81□□□□□ -0.52
COL4A6-205ENST00000468338 TAF10Q12962 218 aa11.81□□□□□ -0.52
COL4A6-205ENST00000468338 ORC1Q13415 861 aa11.81□□□□□ -0.52
COL4A6-205ENST00000468338 WDR44Q5JSH3 913 aa11.81□□□□□ -0.52
COL4A6-205ENST00000468338 TPRG1Q6ZUI0 275 aa11.81□□□□□ -0.52
COL4A6-205ENST00000468338 UBR7Q8N806 425 aa11.81□□□□□ -0.52
COL4A6-205ENST00000468338 KIAA1958Q8N8K9 716 aa11.81□□□□□ -0.52
COL4A6-205ENST00000468338 MLKLQ8NB16 471 aa11.81□□□□□ -0.52
COL4A6-205ENST00000468338 DTWD2Q8NBA8 298 aa11.81□□□□□ -0.52
COL4A6-205ENST00000468338 OVCA2Q8WZ82 227 aa11.81□□□□□ -0.52
COL4A6-205ENST00000468338 CYFIP2Q96F07 1278 aa11.81□□□□□ -0.52
COL4A6-205ENST00000468338 IPO9Q96P70 1041 aaKnown RBP11.81□□□□□ -0.52
COL4A6-205ENST00000468338 CYP2S1Q96SQ9 504 aa11.81□□□□□ -0.52
COL4A6-205ENST00000468338 SRRTQ9BXP5 876 aaKnown RBP11.81□□□□□ -0.52
COL4A6-205ENST00000468338 SMG9Q9H0W8 520 aaKnown RBP11.81□□□□□ -0.52
COL4A6-205ENST00000468338 KRT82Q9NSB4 513 aa11.81□□□□□ -0.52
COL4A6-205ENST00000468338 CISHQ9NSE2 258 aa11.81□□□□□ -0.52
COL4A6-205ENST00000468338 TRPM5Q9NZQ8 1165 aa11.81□□□□□ -0.52
COL4A6-205ENST00000468338 DOLKQ9UPQ8 538 aa11.81□□□□□ -0.52
COL4A6-205ENST00000468338 MTF2Q9Y483 593 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms