RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 C2orf78A6NCI8 922 aa21.11■□□□□ 0.97
NPHP4-206ENST00000468253 ZNF263O14978 683 aa21.11■□□□□ 0.97
NPHP4-206ENST00000468253 OLFM2O95897 454 aa21.11■□□□□ 0.97
NPHP4-206ENST00000468253 OAS1P00973 400 aaKnown RBP21.11■□□□□ 0.97
NPHP4-206ENST00000468253 UCHL3P15374 230 aa21.11■□□□□ 0.97
NPHP4-206ENST00000468253 PLA2G4AP47712 749 aa21.11■□□□□ 0.97
NPHP4-206ENST00000468253 PLCB2Q00722 1185 aa21.11■□□□□ 0.97
NPHP4-206ENST00000468253 ARHGAP29Q52LW3 1261 aa21.11■□□□□ 0.97
NPHP4-206ENST00000468253 PM20D1Q6GTS8 502 aa21.11■□□□□ 0.97
NPHP4-206ENST00000468253 GPRIN1Q7Z2K8 1008 aa21.11■□□□□ 0.97
NPHP4-206ENST00000468253 YAF2Q8IY57 180 aa21.11■□□□□ 0.97
NPHP4-206ENST00000468253 FAM71AQ8IYT1 594 aa21.11■□□□□ 0.97
NPHP4-206ENST00000468253 ARL14EPQ8N8R7 260 aaPredicted RBP21.11■□□□□ 0.97
NPHP4-206ENST00000468253 BPIFB1Q8TDL5 484 aa21.11■□□□□ 0.97
NPHP4-206ENST00000468253 ZNF606Q8WXB4 792 aa21.11■□□□□ 0.97
NPHP4-206ENST00000468253 DNASE1L2Q92874 299 aa21.11■□□□□ 0.97
NPHP4-206ENST00000468253 HSFY1Q96LI6 401 aa21.11■□□□□ 0.97
NPHP4-206ENST00000468253 ERGIC2Q96RQ1 377 aa21.11■□□□□ 0.97
NPHP4-206ENST00000468253 TRPC7Q9HCX4 862 aa21.11■□□□□ 0.97
NPHP4-206ENST00000468253 FBXL21Q9UKT6 434 aa21.11■□□□□ 0.97
NPHP4-206ENST00000468253 PTPRDP23468 1912 aa21.11■□□□□ 0.97
NPHP4-206ENST00000468253 TECTAO75443 2155 aa21.1■□□□□ 0.97
NPHP4-206ENST00000468253 PRAMEF12O95522 483 aa21.1■□□□□ 0.97
NPHP4-206ENST00000468253 GLULP15104 373 aa21.1■□□□□ 0.97
NPHP4-206ENST00000468253 PTK2Q05397 1052 aa21.1■□□□□ 0.97
NPHP4-206ENST00000468253 SLC44A4Q53GD3 710 aa21.1■□□□□ 0.97
NPHP4-206ENST00000468253 SCML4Q8N228 414 aa21.1■□□□□ 0.97
NPHP4-206ENST00000468253 UBA3Q8TBC4 463 aa21.1■□□□□ 0.97
NPHP4-206ENST00000468253 STK32AQ8WU08 396 aa21.1■□□□□ 0.97
NPHP4-206ENST00000468253 SHDQ96IW2 340 aa21.1■□□□□ 0.97
NPHP4-206ENST00000468253 SLC22A12Q96S37 553 aa21.1■□□□□ 0.97
NPHP4-206ENST00000468253 LSM14BQ9BX40 385 aaKnown RBP21.1■□□□□ 0.97
NPHP4-206ENST00000468253 RNF38Q9H0F5 515 aa21.1■□□□□ 0.97
NPHP4-206ENST00000468253 BRD9Q9H8M2 597 aa21.1■□□□□ 0.97
NPHP4-206ENST00000468253 CLIC5Q9NZA1 410 aa21.1■□□□□ 0.97
NPHP4-206ENST00000468253 SIK3Q9Y2K2 1263 aa21.1■□□□□ 0.97
NPHP4-206ENST00000468253 ABL1P00519 1130 aa21.09■□□□□ 0.97
NPHP4-206ENST00000468253 CKMP06732 381 aa21.09■□□□□ 0.97
NPHP4-206ENST00000468253 ATP1A3P13637 1013 aa21.09■□□□□ 0.97
NPHP4-206ENST00000468253 BRD2P25440 801 aaKnown RBP21.09■□□□□ 0.97
NPHP4-206ENST00000468253 GDI1P31150 447 aa21.09■□□□□ 0.97
NPHP4-206ENST00000468253 USP8P40818 1118 aa21.09■□□□□ 0.97
NPHP4-206ENST00000468253 RPL34P49207 117 aaKnown RBP21.09■□□□□ 0.97
NPHP4-206ENST00000468253 UBXN1Q04323 297 aa21.09■□□□□ 0.97
NPHP4-206ENST00000468253 IFRD2Q12894 506 aaPredicted RBP21.09■□□□□ 0.97
NPHP4-206ENST00000468253 DRAP1Q14919 205 aaPredicted RBP21.09■□□□□ 0.97
NPHP4-206ENST00000468253 KLHDC10Q6PID8 442 aa21.09■□□□□ 0.97
NPHP4-206ENST00000468253 GPIHBP1Q8IV16 184 aa21.09■□□□□ 0.97
NPHP4-206ENST00000468253 ARHGAP18Q8N392 663 aa21.09■□□□□ 0.97
NPHP4-206ENST00000468253 PBXIP1Q96AQ6 731 aa21.09■□□□□ 0.97
NPHP4-206ENST00000468253 CBX8Q9HC52 389 aa21.09■□□□□ 0.97
NPHP4-206ENST00000468253 GMIPQ9P107 970 aa21.09■□□□□ 0.97
NPHP4-206ENST00000468253 CYP26A1O43174 497 aa21.08■□□□□ 0.97
NPHP4-206ENST00000468253 CFHP08603 1231 aa21.08■□□□□ 0.97
NPHP4-206ENST00000468253 GNA15P30679 374 aa21.08■□□□□ 0.97
NPHP4-206ENST00000468253 CLCN1P35523 988 aa21.08■□□□□ 0.97
NPHP4-206ENST00000468253 GPD2P43304 727 aa21.08■□□□□ 0.97
NPHP4-206ENST00000468253 TPM4P67936 248 aa21.08■□□□□ 0.97
NPHP4-206ENST00000468253 PRKCQQ04759 706 aa21.08■□□□□ 0.97
NPHP4-206ENST00000468253 FILIP1LQ4L180 1135 aa21.08■□□□□ 0.97
NPHP4-206ENST00000468253 CDK5RAP1Q96SZ6 601 aaKnown RBP21.08■□□□□ 0.97
NPHP4-206ENST00000468253 LRFN3Q9BTN0 628 aa21.08■□□□□ 0.97
NPHP4-206ENST00000468253 SMG9Q9H0W8 520 aaKnown RBP21.08■□□□□ 0.97
NPHP4-206ENST00000468253 LRRC4Q9HBW1 653 aa21.08■□□□□ 0.97
NPHP4-206ENST00000468253 RTN4Q9NQC3 1192 aaKnown RBP21.08■□□□□ 0.97
NPHP4-206ENST00000468253 CYLDQ9NQC7 956 aa21.08■□□□□ 0.97
NPHP4-206ENST00000468253 CCL26Q9Y258 94 aa21.08■□□□□ 0.97
NPHP4-206ENST00000468253 ARNTLO00327 626 aa21.07■□□□□ 0.96
NPHP4-206ENST00000468253 ZBED1O96006 694 aa21.07■□□□□ 0.96
NPHP4-206ENST00000468253 TKTL1P51854 596 aa21.07■□□□□ 0.96
NPHP4-206ENST00000468253 STARD6P59095 220 aa21.07■□□□□ 0.96
NPHP4-206ENST00000468253 GRM2Q14416 872 aa21.07■□□□□ 0.96
NPHP4-206ENST00000468253 SYCP1Q15431 976 aa21.07■□□□□ 0.96
NPHP4-206ENST00000468253 PMF1Q6P1K2 205 aa21.07■□□□□ 0.96
NPHP4-206ENST00000468253 SCD5Q86SK9 330 aa21.07■□□□□ 0.96
NPHP4-206ENST00000468253 TADA2BQ86TJ2 420 aa21.07■□□□□ 0.96
NPHP4-206ENST00000468253 DDX42Q86XP3 938 aaKnown RBP eCLIP21.07■□□□□ 0.96
NPHP4-206ENST00000468253 FAM83CQ9BQN1 747 aa21.07■□□□□ 0.96
NPHP4-206ENST00000468253 GANQ9H2C0 597 aa21.07■□□□□ 0.96
NPHP4-206ENST00000468253 LHX5Q9H2C1 402 aa21.07■□□□□ 0.96
NPHP4-206ENST00000468253 CNGB3Q9NQW8 809 aa21.07■□□□□ 0.96
NPHP4-206ENST00000468253 GKN1Q9NS71 199 aa21.07■□□□□ 0.96
NPHP4-206ENST00000468253 AJAP1Q9UKB5 411 aaPredicted RBP21.07■□□□□ 0.96
NPHP4-206ENST00000468253 PCDHGC3Q9UN70 934 aa21.07■□□□□ 0.96
NPHP4-206ENST00000468253 FHOD1Q9Y613 1164 aa21.07■□□□□ 0.96
NPHP4-206ENST00000468253 KRBA1A5PL33 1030 aa21.06■□□□□ 0.96
NPHP4-206ENST00000468253 TULP2O00295 520 aa21.06■□□□□ 0.96
NPHP4-206ENST00000468253 COCHO43405 550 aa21.06■□□□□ 0.96
NPHP4-206ENST00000468253 THAP12O43422 761 aa21.06■□□□□ 0.96
NPHP4-206ENST00000468253 TLR5O60602 858 aa21.06■□□□□ 0.96
NPHP4-206ENST00000468253 ATP5C1P36542 298 aaKnown RBP21.06■□□□□ 0.96
NPHP4-206ENST00000468253 ACADSBP45954 432 aa21.06■□□□□ 0.96
NPHP4-206ENST00000468253 PGFP49763 221 aa21.06■□□□□ 0.96
NPHP4-206ENST00000468253 CLCN5P51795 746 aa21.06■□□□□ 0.96
NPHP4-206ENST00000468253 ZNF77Q15935 545 aa21.06■□□□□ 0.96
NPHP4-206ENST00000468253 CC2D1AQ6P1N0 951 aaPredicted RBP21.06■□□□□ 0.96
NPHP4-206ENST00000468253 HFE2Q6ZVN8 426 aa21.06■□□□□ 0.96
NPHP4-206ENST00000468253 SIX5Q8N196 739 aa21.06■□□□□ 0.96
NPHP4-206ENST00000468253 FBXL6Q8N531 539 aa21.06■□□□□ 0.96
NPHP4-206ENST00000468253 SH3RF2Q8TEC5 729 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms