RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 MRPS21P82921 87 aaKnown RBP18.34■□□□□ 0.53
TRIM56-203ENST00000467847 SHC2P98077 582 aa18.34■□□□□ 0.53
TRIM56-203ENST00000467847 CRY1Q16526 586 aa18.34■□□□□ 0.53
TRIM56-203ENST00000467847 ZNF699Q32M78 642 aa18.34■□□□□ 0.53
TRIM56-203ENST00000467847 RHBDF2Q6PJF5 856 aa18.34■□□□□ 0.53
TRIM56-203ENST00000467847 CNOT6LQ96LI5 555 aaKnown RBP18.34■□□□□ 0.53
TRIM56-203ENST00000467847 PNKPQ96T60 521 aa18.34■□□□□ 0.53
TRIM56-203ENST00000467847 MED10Q9BTT4 135 aa18.34■□□□□ 0.53
TRIM56-203ENST00000467847 EDEM2Q9BV94 578 aa18.34■□□□□ 0.53
TRIM56-203ENST00000467847 LSM14BQ9BX40 385 aaKnown RBP18.34■□□□□ 0.53
TRIM56-203ENST00000467847 FAM13BQ9NYF5 915 aa18.34■□□□□ 0.53
TRIM56-203ENST00000467847 PVALEFA0A1B0GWK0 134 aa18.33■□□□□ 0.52
TRIM56-203ENST00000467847 ALDH1A2O94788 518 aa18.33■□□□□ 0.52
TRIM56-203ENST00000467847 KAT7O95251 611 aa18.33■□□□□ 0.52
TRIM56-203ENST00000467847 APODP05090 189 aa18.33■□□□□ 0.52
TRIM56-203ENST00000467847 ADH5P11766 374 aa18.33■□□□□ 0.52
TRIM56-203ENST00000467847 EIF2DP41214 584 aaKnown RBP18.33■□□□□ 0.52
TRIM56-203ENST00000467847 ME1P48163 572 aa18.33■□□□□ 0.52
TRIM56-203ENST00000467847 CDH8P55286 799 aa18.33■□□□□ 0.52
TRIM56-203ENST00000467847 CUL4BQ13620 913 aa18.33■□□□□ 0.52
TRIM56-203ENST00000467847 PMS2CLQ68D20 193 aa18.33■□□□□ 0.52
TRIM56-203ENST00000467847 SCARA5Q6ZMJ2 495 aa18.33■□□□□ 0.52
TRIM56-203ENST00000467847 FAM35AQ86V20 835 aa18.33■□□□□ 0.52
TRIM56-203ENST00000467847 C12orf40Q86WS4 652 aa18.33■□□□□ 0.52
TRIM56-203ENST00000467847 SFTPA1Q8IWL2 248 aa18.33■□□□□ 0.52
TRIM56-203ENST00000467847 ALLCQ8N6M5 410 aa18.33■□□□□ 0.52
TRIM56-203ENST00000467847 MDGA1Q8NFP4 955 aa18.33■□□□□ 0.52
TRIM56-203ENST00000467847 GOLGA5Q8TBA6 731 aa18.33■□□□□ 0.52
TRIM56-203ENST00000467847 OVCA2Q8WZ82 227 aa18.33■□□□□ 0.52
TRIM56-203ENST00000467847 KCNK16Q96T55 309 aa18.33■□□□□ 0.52
TRIM56-203ENST00000467847 BACH2Q9BYV9 841 aa18.33■□□□□ 0.52
TRIM56-203ENST00000467847 TBC1D14Q9P2M4 693 aa18.33■□□□□ 0.52
TRIM56-203ENST00000467847 MYO18AQ92614 2054 aaKnown RBP18.32■□□□□ 0.52
TRIM56-203ENST00000467847 E2F8A0AVK6 867 aa18.32■□□□□ 0.52
TRIM56-203ENST00000467847 COCHO43405 550 aa18.32■□□□□ 0.52
TRIM56-203ENST00000467847 KLF8O95600 359 aaPredicted RBP18.32■□□□□ 0.52
TRIM56-203ENST00000467847 PROS1P07225 676 aa18.32■□□□□ 0.52
TRIM56-203ENST00000467847 BCKDHBP21953 392 aa18.32■□□□□ 0.52
TRIM56-203ENST00000467847 AP3M2P53677 418 aa18.32■□□□□ 0.52
TRIM56-203ENST00000467847 KDSRQ06136 332 aa18.32■□□□□ 0.52
TRIM56-203ENST00000467847 MESP2Q0VG99 397 aa18.32■□□□□ 0.52
TRIM56-203ENST00000467847 ZNF667Q5HYK9 610 aa18.32■□□□□ 0.52
TRIM56-203ENST00000467847 HECTD3Q5T447 861 aa18.32■□□□□ 0.52
TRIM56-203ENST00000467847 TMEM92Q6UXU6 159 aa18.32■□□□□ 0.52
TRIM56-203ENST00000467847 GRAMD1CQ8IYS0 662 aa18.32■□□□□ 0.52
TRIM56-203ENST00000467847 TXNDC5Q8NBS9 432 aaKnown RBP18.32■□□□□ 0.52
TRIM56-203ENST00000467847 SCAMP5Q8TAC9 235 aa18.32■□□□□ 0.52
TRIM56-203ENST00000467847 PLEKHO2Q8TD55 490 aa18.32■□□□□ 0.52
TRIM56-203ENST00000467847 TNIP3Q96KP6 325 aa18.32■□□□□ 0.52
TRIM56-203ENST00000467847 VRTNQ9H8Y1 702 aa18.32■□□□□ 0.52
TRIM56-203ENST00000467847 DMAP1Q9NPF5 467 aaPredicted RBP18.32■□□□□ 0.52
TRIM56-203ENST00000467847 ARHGEF4Q9NR80 690 aa18.32■□□□□ 0.52
TRIM56-203ENST00000467847 CHORDC1Q9UHD1 332 aaPredicted RBP18.32■□□□□ 0.52
TRIM56-203ENST00000467847 PCDHA7Q9UN72 937 aa18.32■□□□□ 0.52
TRIM56-203ENST00000467847 FAM208BQ5VWN6 2430 aa18.31■□□□□ 0.52
TRIM56-203ENST00000467847 LNP1A1A4G5 178 aa18.31■□□□□ 0.52
TRIM56-203ENST00000467847 LRRIQ3A6PVS8 624 aaPredicted RBP18.31■□□□□ 0.52
TRIM56-203ENST00000467847 C4orf47A7E2U8 309 aa18.31■□□□□ 0.52
TRIM56-203ENST00000467847 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.31■□□□□ 0.52
TRIM56-203ENST00000467847 KCNK5O95279 499 aa18.31■□□□□ 0.52
TRIM56-203ENST00000467847 TIE1P35590 1138 aa18.31■□□□□ 0.52
TRIM56-203ENST00000467847 GRIA2P42262 883 aa18.31■□□□□ 0.52
TRIM56-203ENST00000467847 SLC5A3P53794 718 aa18.31■□□□□ 0.52
TRIM56-203ENST00000467847 NCOA4Q13772 614 aa18.31■□□□□ 0.52
TRIM56-203ENST00000467847 HSF5Q4G112 596 aaPredicted RBP18.31■□□□□ 0.52
TRIM56-203ENST00000467847 LY6G5CQ5SRR4 150 aa18.31■□□□□ 0.52
TRIM56-203ENST00000467847 RESP18Q5W5W9 173 aa18.31■□□□□ 0.52
TRIM56-203ENST00000467847 CYP2U1Q7Z449 544 aa18.31■□□□□ 0.52
TRIM56-203ENST00000467847 CEP57L1Q8IYX8 460 aa18.31■□□□□ 0.52
TRIM56-203ENST00000467847 IL17RCQ8NAC3 791 aa18.31■□□□□ 0.52
TRIM56-203ENST00000467847 PARD3BQ8TEW8 1205 aa18.31■□□□□ 0.52
TRIM56-203ENST00000467847 ELMO3Q96BJ8 720 aa18.31■□□□□ 0.52
TRIM56-203ENST00000467847 SMARCD1Q96GM5 515 aa18.31■□□□□ 0.52
TRIM56-203ENST00000467847 ZFRQ96KR1 1074 aaKnown RBP18.31■□□□□ 0.52
TRIM56-203ENST00000467847 CCSER2Q9H7U1 834 aa18.31■□□□□ 0.52
TRIM56-203ENST00000467847 KRT82Q9NSB4 513 aa18.31■□□□□ 0.52
TRIM56-203ENST00000467847 CIZ1Q9ULV3 898 aaPredicted RBP18.31■□□□□ 0.52
TRIM56-203ENST00000467847 SGK1O00141 431 aa18.3■□□□□ 0.52
TRIM56-203ENST00000467847 TNFRSF10BO14763 440 aa18.3■□□□□ 0.52
TRIM56-203ENST00000467847 KHNYNO15037 678 aaKnown RBP18.3■□□□□ 0.52
TRIM56-203ENST00000467847 AP1G2O75843 785 aa18.3■□□□□ 0.52
TRIM56-203ENST00000467847 F13A1P00488 732 aa18.3■□□□□ 0.52
TRIM56-203ENST00000467847 ZSCAN22P10073 491 aaPredicted RBP18.3■□□□□ 0.52
TRIM56-203ENST00000467847 HNRNPLP14866 589 aaKnown RBP eCLIP18.3■□□□□ 0.52
TRIM56-203ENST00000467847 DHPSP49366 369 aaPredicted RBP18.3■□□□□ 0.52
TRIM56-203ENST00000467847 TUBP50607 506 aa18.3■□□□□ 0.52
TRIM56-203ENST00000467847 CLDN10P78369 228 aa18.3■□□□□ 0.52
TRIM56-203ENST00000467847 EOGTQ5NDL2 527 aa18.3■□□□□ 0.52
TRIM56-203ENST00000467847 EMC10Q5UCC4 262 aa18.3■□□□□ 0.52
TRIM56-203ENST00000467847 SNX30Q5VWJ9 437 aa18.3■□□□□ 0.52
TRIM56-203ENST00000467847 PSAPL1Q6NUJ1 521 aa18.3■□□□□ 0.52
TRIM56-203ENST00000467847 PAQR9Q6ZVX9 377 aa18.3■□□□□ 0.52
TRIM56-203ENST00000467847 ACOT1Q86TX2 421 aa18.3■□□□□ 0.52
TRIM56-203ENST00000467847 WHAMMQ8TF30 809 aa18.3■□□□□ 0.52
TRIM56-203ENST00000467847 OTUB2Q96DC9 234 aa18.3■□□□□ 0.52
TRIM56-203ENST00000467847 NACA2Q9H009 215 aa18.3■□□□□ 0.52
TRIM56-203ENST00000467847 SDCBP2Q9H190 292 aa18.3■□□□□ 0.52
TRIM56-203ENST00000467847 POLMQ9NP87 494 aaPredicted RBP18.3■□□□□ 0.52
TRIM56-203ENST00000467847 GMIPQ9P107 970 aa18.3■□□□□ 0.52
TRIM56-203ENST00000467847 BCCIPQ9P287 314 aaKnown RBP eCLIP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms