RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 ADIGQ0VDE8 80 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 H2AFVQ71UI9 128 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 PHLDB2Q86SQ0 1253 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 KIAA1328Q86T90 577 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 TMEM110Q86TL2 294 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 GPR152Q8TDT2 470 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 STK32AQ8WU08 396 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 C18orf8Q96DM3 657 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 HSFY1Q96LI6 401 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 SLC4A5Q9BY07 1137 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 LACRTQ9GZZ8 138 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 LMAN2LQ9H0V9 348 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 TTYH1Q9H313 450 aaPredicted RBP7.22□□□□□ -1.25
SCAF4-204ENST00000467731 LUC7LQ9NQ29 371 aaKnown RBP7.22□□□□□ -1.25
SCAF4-204ENST00000467731 USP27XA6NNY8 438 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 SOX1O00570 391 aaPredicted RBP7.22□□□□□ -1.25
SCAF4-204ENST00000467731 PRRG1O14668 218 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 ABL1P00519 1130 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 CALB1P05937 261 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 RRM1P23921 792 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 ELF1P32519 619 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 GABRB2P47870 512 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 RPL34P49207 117 aaKnown RBP7.22□□□□□ -1.25
SCAF4-204ENST00000467731 SLC5A3P53794 718 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 IFRD2Q12894 506 aaPredicted RBP7.22□□□□□ -1.25
SCAF4-204ENST00000467731 RAB41Q5JT25 222 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 PPP1R2P3Q6NXS1 205 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 LILRA6Q6PI73 481 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 SCUBE3Q8IX30 993 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 KRT222Q8N1A0 295 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 MSANTD4Q8NCY6 345 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 SCAMP5Q8TAC9 235 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 CTNNBL1Q8WYA6 563 aaPredicted RBP7.22□□□□□ -1.25
SCAF4-204ENST00000467731 KCTD13Q8WZ19 329 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 ZNF653Q96CK0 615 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 ARHGEF26Q96DR7 871 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 PIWIL1Q96J94 861 aaKnown RBP7.22□□□□□ -1.25
SCAF4-204ENST00000467731 VCPIP1Q96JH7 1222 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 C8orf48Q96LL4 319 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 SUDS3Q9H7L9 328 aaPredicted RBP7.22□□□□□ -1.25
SCAF4-204ENST00000467731 LRRC4Q9HBW1 653 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 PNPLA8Q9NP80 782 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 TRMT1Q9NXH9 659 aaKnown RBP7.22□□□□□ -1.25
SCAF4-204ENST00000467731 FBXW11Q9UKB1 542 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 DUSP10Q9Y6W6 482 aa7.22□□□□□ -1.25
SCAF4-204ENST00000467731 TNFRSF10BO14763 440 aa7.21□□□□□ -1.25
SCAF4-204ENST00000467731 PAPSS1O43252 624 aaPredicted RBP7.21□□□□□ -1.25
SCAF4-204ENST00000467731 ACADSBP45954 432 aa7.21□□□□□ -1.25
SCAF4-204ENST00000467731 TUFMP49411 452 aaKnown RBP7.21□□□□□ -1.25
SCAF4-204ENST00000467731 TKTL1P51854 596 aa7.21□□□□□ -1.25
SCAF4-204ENST00000467731 MAP9Q49MG5 647 aa7.21□□□□□ -1.25
SCAF4-204ENST00000467731 FAM183BPQ6ZVS7 135 aa7.21□□□□□ -1.25
SCAF4-204ENST00000467731 XYLT1Q86Y38 959 aa7.21□□□□□ -1.25
SCAF4-204ENST00000467731 TCEAL8Q8IYN2 117 aa7.21□□□□□ -1.25
SCAF4-204ENST00000467731 C17orf53Q8N3J3 647 aaPredicted RBP7.21□□□□□ -1.25
SCAF4-204ENST00000467731 KREMEN2Q8NCW0 462 aa7.21□□□□□ -1.25
SCAF4-204ENST00000467731 SLC7A14Q8TBB6 771 aa7.21□□□□□ -1.25
SCAF4-204ENST00000467731 KIAA1524Q8TCG1 905 aa7.21□□□□□ -1.25
SCAF4-204ENST00000467731 CLEC4CQ8WTT0 213 aa7.21□□□□□ -1.25
SCAF4-204ENST00000467731 MRPL38Q96DV4 380 aaKnown RBP7.21□□□□□ -1.25
SCAF4-204ENST00000467731 CCDC97Q96F63 343 aaPredicted RBP7.21□□□□□ -1.25
SCAF4-204ENST00000467731 LRCH3Q96II8 777 aa7.21□□□□□ -1.25
SCAF4-204ENST00000467731 UBXN6Q9BZV1 441 aa7.21□□□□□ -1.25
SCAF4-204ENST00000467731 MIS12Q9H081 205 aa7.21□□□□□ -1.25
SCAF4-204ENST00000467731 PRDM12Q9H4Q4 367 aa7.21□□□□□ -1.25
SCAF4-204ENST00000467731 CYLDQ9NQC7 956 aa7.21□□□□□ -1.25
SCAF4-204ENST00000467731 MYO1AQ9UBC5 1043 aa7.21□□□□□ -1.25
SCAF4-204ENST00000467731 HSFX1Q9UBD0 423 aa7.21□□□□□ -1.25
SCAF4-204ENST00000467731 TRIM10Q9UDY6 481 aa7.21□□□□□ -1.25
SCAF4-204ENST00000467731 CNOT8Q9UFF9 292 aaKnown RBP7.21□□□□□ -1.25
SCAF4-204ENST00000467731 STRIP2Q9ULQ0 834 aa7.21□□□□□ -1.25
SCAF4-204ENST00000467731 YIPF1Q9Y548 306 aa7.21□□□□□ -1.25
SCAF4-204ENST00000467731 ANAPC1Q9H1A4 1944 aa7.21□□□□□ -1.26
SCAF4-204ENST00000467731 PJA2O43164 708 aa7.21□□□□□ -1.26
SCAF4-204ENST00000467731 CLASP2O75122 1294 aaKnown RBP7.21□□□□□ -1.26
SCAF4-204ENST00000467731 TMEM253P0C7T8 217 aa7.21□□□□□ -1.26
SCAF4-204ENST00000467731 NEFHP12036 1026 aa7.21□□□□□ -1.26
SCAF4-204ENST00000467731 EPCAMP16422 314 aa7.21□□□□□ -1.26
SCAF4-204ENST00000467731 PAX7P23759 505 aa7.21□□□□□ -1.26
SCAF4-204ENST00000467731 GYS2P54840 703 aa7.21□□□□□ -1.26
SCAF4-204ENST00000467731 USP46P62068 366 aa7.21□□□□□ -1.26
SCAF4-204ENST00000467731 GPC5P78333 572 aa7.21□□□□□ -1.26
SCAF4-204ENST00000467731 KIF5AQ12840 1032 aa7.21□□□□□ -1.26
SCAF4-204ENST00000467731 MTMR3Q13615 1198 aa7.21□□□□□ -1.26
SCAF4-204ENST00000467731 PTPROQ16827 1216 aa7.21□□□□□ -1.26
SCAF4-204ENST00000467731 DENND5BQ6ZUT9 1274 aa7.21□□□□□ -1.26
SCAF4-204ENST00000467731 NUP93Q8N1F7 819 aa7.21□□□□□ -1.26
SCAF4-204ENST00000467731 SIX6OS1Q8N1H7 587 aa7.21□□□□□ -1.26
SCAF4-204ENST00000467731 GIPC2Q8TF65 315 aa7.21□□□□□ -1.26
SCAF4-204ENST00000467731 NDRG1Q92597 394 aaKnown RBP7.21□□□□□ -1.26
SCAF4-204ENST00000467731 LZTFL1Q9NQ48 299 aa7.21□□□□□ -1.26
SCAF4-204ENST00000467731 SALL4Q9UJQ4 1053 aa7.21□□□□□ -1.26
SCAF4-204ENST00000467731 INTUQ9ULD6 942 aa7.21□□□□□ -1.26
SCAF4-204ENST00000467731 INSL5Q9Y5Q6 135 aa7.21□□□□□ -1.26
SCAF4-204ENST00000467731 HCFC2Q9Y5Z7 792 aa7.21□□□□□ -1.26
SCAF4-204ENST00000467731 DENND4CQ5VZ89 1909 aa7.21□□□□□ -1.26
SCAF4-204ENST00000467731 OBSL1O75147 1896 aa7.21□□□□□ -1.26
SCAF4-204ENST00000467731 TMEM265A0A087WTH1 108 aa7.2□□□□□ -1.26
SCAF4-204ENST00000467731 GOLGA8SH3BPF8 625 aa7.2□□□□□ -1.26
SCAF4-204ENST00000467731 ZSCAN12O43309 604 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms