RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 SIRT6Q8N6T7 355 aa4.72□□□□□ -1.65
VPS13D-203ENST00000466732 TERB1Q8NA31 727 aa4.72□□□□□ -1.65
VPS13D-203ENST00000466732 PHKBQ93100 1093 aa4.72□□□□□ -1.65
VPS13D-203ENST00000466732 DAZAP1Q96EP5 407 aaKnown RBP4.72□□□□□ -1.65
VPS13D-203ENST00000466732 SNX22Q96L94 193 aa4.72□□□□□ -1.65
VPS13D-203ENST00000466732 STRBPQ96SI9 672 aaKnown RBP4.72□□□□□ -1.65
VPS13D-203ENST00000466732 DKK4Q9UBT3 224 aa4.72□□□□□ -1.65
VPS13D-203ENST00000466732 AMFRQ9UKV5 643 aa4.72□□□□□ -1.65
VPS13D-203ENST00000466732 SNX13Q9Y5W8 968 aa4.72□□□□□ -1.65
VPS13D-203ENST00000466732 AQP7P3A6NL99 342 aa4.71□□□□□ -1.66
VPS13D-203ENST00000466732 H7C1Q1 480 aa4.71□□□□□ -1.66
VPS13D-203ENST00000466732 CES2O00748 559 aa4.71□□□□□ -1.66
VPS13D-203ENST00000466732 PQBP1O60828 265 aaKnown RBP4.71□□□□□ -1.66
VPS13D-203ENST00000466732 INMTO95050 263 aa4.71□□□□□ -1.66
VPS13D-203ENST00000466732 FGAP02671 866 aa4.71□□□□□ -1.66
VPS13D-203ENST00000466732 MT-ND5P03915 603 aa4.71□□□□□ -1.66
VPS13D-203ENST00000466732 MYCLP12524 364 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-203ENST00000466732 IL1R2P27930 398 aa4.71□□□□□ -1.66
VPS13D-203ENST00000466732 ABCG1P45844 678 aa4.71□□□□□ -1.66
VPS13D-203ENST00000466732 MTHFSP49914 203 aa4.71□□□□□ -1.66
VPS13D-203ENST00000466732 PGDP52209 483 aa4.71□□□□□ -1.66
VPS13D-203ENST00000466732 SUMO2P61956 95 aaKnown RBP4.71□□□□□ -1.66
VPS13D-203ENST00000466732 HTRA4P83105 476 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-203ENST00000466732 PSG6Q00889 435 aa4.71□□□□□ -1.66
VPS13D-203ENST00000466732 STK3Q13188 491 aa4.71□□□□□ -1.66
VPS13D-203ENST00000466732 KIAA1614Q5VZ46 1190 aa4.71□□□□□ -1.66
VPS13D-203ENST00000466732 PLAG1Q6DJT9 500 aa4.71□□□□□ -1.66
VPS13D-203ENST00000466732 ZNF66Q6ZN08 573 aa4.71□□□□□ -1.66
VPS13D-203ENST00000466732 CHSY1Q86X52 802 aa4.71□□□□□ -1.66
VPS13D-203ENST00000466732 SMCR8Q8TEV9 937 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-203ENST00000466732 IPCEF1Q8WWN9 437 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-203ENST00000466732 CTHRC1Q96CG8 243 aa4.71□□□□□ -1.66
VPS13D-203ENST00000466732 SNX18Q96RF0 628 aa4.71□□□□□ -1.66
VPS13D-203ENST00000466732 INO80BQ9C086 356 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-203ENST00000466732 UNKQ9C0B0 810 aaKnown RBP4.71□□□□□ -1.66
VPS13D-203ENST00000466732 CIPCQ9C0C6 399 aa4.71□□□□□ -1.66
VPS13D-203ENST00000466732 RHPN2P1A8MT19 583 aa4.7□□□□□ -1.66
VPS13D-203ENST00000466732 PRRT4C9JH25 899 aa4.7□□□□□ -1.66
VPS13D-203ENST00000466732 M0R3H8 397 aa4.7□□□□□ -1.66
VPS13D-203ENST00000466732 AGPSO00116 658 aa4.7□□□□□ -1.66
VPS13D-203ENST00000466732 RENBPP51606 427 aa4.7□□□□□ -1.66
VPS13D-203ENST00000466732 KCNAB1Q14722 419 aa4.7□□□□□ -1.66
VPS13D-203ENST00000466732 PTCHD4Q6ZW05 846 aa4.7□□□□□ -1.66
VPS13D-203ENST00000466732 SFTPA1Q8IWL2 248 aa4.7□□□□□ -1.66
VPS13D-203ENST00000466732 VGLL2Q8N8G2 317 aa4.7□□□□□ -1.66
VPS13D-203ENST00000466732 PNLDC1Q8NA58 520 aaKnown RBP4.7□□□□□ -1.66
VPS13D-203ENST00000466732 RITA1Q96K30 269 aa4.7□□□□□ -1.66
VPS13D-203ENST00000466732 C8orf48Q96LL4 319 aa4.7□□□□□ -1.66
VPS13D-203ENST00000466732 MMS19Q96T76 1030 aa4.7□□□□□ -1.66
VPS13D-203ENST00000466732 BRIP1Q9BX63 1249 aa4.7□□□□□ -1.66
VPS13D-203ENST00000466732 FAM83DQ9H4H8 585 aa4.7□□□□□ -1.66
VPS13D-203ENST00000466732 TRIM36Q9NQ86 728 aa4.7□□□□□ -1.66
VPS13D-203ENST00000466732 TBC1D23Q9NUY8 699 aa4.7□□□□□ -1.66
VPS13D-203ENST00000466732 LPAR3Q9UBY5 353 aa4.7□□□□□ -1.66
VPS13D-203ENST00000466732 ZNF212Q9UDV6 495 aa4.7□□□□□ -1.66
VPS13D-203ENST00000466732 CAPN11Q9UMQ6 739 aa4.7□□□□□ -1.66
VPS13D-203ENST00000466732 CORO2BQ9UQ03 480 aa4.7□□□□□ -1.66
VPS13D-203ENST00000466732 TNFRSF18Q9Y5U5 241 aa4.7□□□□□ -1.66
VPS13D-203ENST00000466732 DNAJC9-AS1A6NH13 148 aa4.69□□□□□ -1.66
VPS13D-203ENST00000466732 FOXN3O00409 490 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-203ENST00000466732 EXOC5O00471 708 aa4.69□□□□□ -1.66
VPS13D-203ENST00000466732 SPRY2O43597 315 aa4.69□□□□□ -1.66
VPS13D-203ENST00000466732 IL18RAPO95256 599 aa4.69□□□□□ -1.66
VPS13D-203ENST00000466732 A1BGP04217 495 aa4.69□□□□□ -1.66
VPS13D-203ENST00000466732 ANXA2P07355 339 aaKnown RBP4.69□□□□□ -1.66
VPS13D-203ENST00000466732 PARP1P09874 1014 aaKnown RBP4.69□□□□□ -1.66
VPS13D-203ENST00000466732 CDK4P11802 303 aa4.69□□□□□ -1.66
VPS13D-203ENST00000466732 MPGP29372 298 aa4.69□□□□□ -1.66
VPS13D-203ENST00000466732 PIK3CBP42338 1070 aa4.69□□□□□ -1.66
VPS13D-203ENST00000466732 GATMP50440 423 aa4.69□□□□□ -1.66
VPS13D-203ENST00000466732 ALDH5A1P51649 535 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-203ENST00000466732 DAG1Q14118 895 aa4.69□□□□□ -1.66
VPS13D-203ENST00000466732 SERPINA13PQ6UXR4 307 aa4.69□□□□□ -1.66
VPS13D-203ENST00000466732 SDR16C5Q8N3Y7 309 aa4.69□□□□□ -1.66
VPS13D-203ENST00000466732 WDYHV1Q96HA8 205 aa4.69□□□□□ -1.66
VPS13D-203ENST00000466732 ZNF668Q96K58 619 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-203ENST00000466732 ASB2Q96Q27 587 aa4.69□□□□□ -1.66
VPS13D-203ENST00000466732 KRTAP17-1Q9BYP8 105 aa4.69□□□□□ -1.66
VPS13D-203ENST00000466732 SEMA4CQ9C0C4 833 aa4.69□□□□□ -1.66
VPS13D-203ENST00000466732 PNPLA8Q9NP80 782 aa4.69□□□□□ -1.66
VPS13D-203ENST00000466732 TFCP2L1Q9NZI6 479 aa4.69□□□□□ -1.66
VPS13D-203ENST00000466732 RIMKLBQ9ULI2 386 aa4.69□□□□□ -1.66
VPS13D-203ENST00000466732 FAM50BQ9Y247 325 aa4.69□□□□□ -1.66
VPS13D-203ENST00000466732 FNDC1Q4ZHG4 1894 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-203ENST00000466732 COL3A1P02461 1466 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-203ENST00000466732 TCRBV5S1A1TA0A578 114 aa4.68□□□□□ -1.66
VPS13D-203ENST00000466732 POC1B-GALNT4F8VUJ3 575 aa4.68□□□□□ -1.66
VPS13D-203ENST00000466732 ADAMTS3O15072 1205 aa4.68□□□□□ -1.66
VPS13D-203ENST00000466732 CYP2D6P10635 497 aa4.68□□□□□ -1.66
VPS13D-203ENST00000466732 CREB1P16220 341 aa4.68□□□□□ -1.66
VPS13D-203ENST00000466732 CERS1P27544 350 aa4.68□□□□□ -1.66
VPS13D-203ENST00000466732 EPHB2P29323 1055 aa4.68□□□□□ -1.66
VPS13D-203ENST00000466732 NTSR1P30989 418 aa4.68□□□□□ -1.66
VPS13D-203ENST00000466732 DIO1P49895 249 aa4.68□□□□□ -1.66
VPS13D-203ENST00000466732 LMAN2Q12907 356 aa4.68□□□□□ -1.66
VPS13D-203ENST00000466732 EZH2Q15910 746 aaKnown RBP4.68□□□□□ -1.66
VPS13D-203ENST00000466732 SRSF7Q16629 238 aaKnown RBP eCLIP4.68□□□□□ -1.66
VPS13D-203ENST00000466732 CEP78Q5JTW2 689 aa4.68□□□□□ -1.66
VPS13D-203ENST00000466732 CATSPERGQ6ZRH7 1159 aa4.68□□□□□ -1.66
VPS13D-203ENST00000466732 USP49Q70CQ1 688 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms