RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 TCF3P15923 654 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 HDCP19113 662 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 SLC9A1P19634 815 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 BRD2P25440 801 aaKnown RBP13.61□□□□□ -0.23
COL5A1-206ENST00000465877 AVPR2P30518 371 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 TUBP50607 506 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 KIF11P52732 1056 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 SLC8A3P57103 927 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 SLC7A9P82251 487 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 MYL5Q02045 173 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 BST2Q10589 180 aaKnown RBP13.61□□□□□ -0.23
COL5A1-206ENST00000465877 SNX30Q5VWJ9 437 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 GJB7Q6PEY0 223 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 ENOSF1Q7L5Y1 443 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 CCDC186Q7Z3E2 898 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 PIGZQ86VD9 579 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 CCDC105Q8IYK2 499 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 ANKRD52Q8NB46 1076 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 TTC16Q8NEE8 873 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 SH3RF2Q8TEC5 729 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 MSANTD3Q96H12 275 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 CCSER2Q9H7U1 834 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 LTB4R2Q9NPC1 389 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 SIX2Q9NPC8 291 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 UBE2TQ9NPD8 197 aaPredicted RBP13.61□□□□□ -0.23
COL5A1-206ENST00000465877 TLR8Q9NR97 1041 aaKnown RBP13.61□□□□□ -0.23
COL5A1-206ENST00000465877 THG1LQ9NWX6 298 aaKnown RBP13.61□□□□□ -0.23
COL5A1-206ENST00000465877 TAB2Q9NYJ8 693 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 GTSE1Q9NYZ3 720 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 HESX1Q9UBX0 185 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 SCML2Q9UQR0 700 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 CPQQ9Y646 472 aa13.61□□□□□ -0.23
COL5A1-206ENST00000465877 F5P12259 2224 aa13.6□□□□□ -0.23
COL5A1-206ENST00000465877 USP34Q70CQ2 3546 aa13.6□□□□□ -0.23
COL5A1-206ENST00000465877 M0QYV0 167 aa13.6□□□□□ -0.23
COL5A1-206ENST00000465877 RNF225M0QZC1 329 aaPredicted RBP13.6□□□□□ -0.23
COL5A1-206ENST00000465877 TULP2O00295 520 aa13.6□□□□□ -0.23
COL5A1-206ENST00000465877 XPO1O14980 1071 aaKnown RBP13.6□□□□□ -0.23
COL5A1-206ENST00000465877 COCHO43405 550 aa13.6□□□□□ -0.23
COL5A1-206ENST00000465877 TLR5O60602 858 aa13.6□□□□□ -0.23
COL5A1-206ENST00000465877 SETSIPP0DME0 302 aa13.6□□□□□ -0.23
COL5A1-206ENST00000465877 MBL2P11226 248 aaPredicted RBP13.6□□□□□ -0.23
COL5A1-206ENST00000465877 CD72P21854 359 aa13.6□□□□□ -0.23
COL5A1-206ENST00000465877 TARSP26639 723 aaKnown RBP13.6□□□□□ -0.23
COL5A1-206ENST00000465877 PON1P27169 355 aa13.6□□□□□ -0.23
COL5A1-206ENST00000465877 SOX9P48436 509 aa13.6□□□□□ -0.23
COL5A1-206ENST00000465877 PGFP49763 221 aa13.6□□□□□ -0.23
COL5A1-206ENST00000465877 TNK2Q07912 1038 aa13.6□□□□□ -0.23
COL5A1-206ENST00000465877 PDE4CQ08493 712 aa13.6□□□□□ -0.23
COL5A1-206ENST00000465877 UBXN2BQ14CS0 331 aa13.6□□□□□ -0.23
COL5A1-206ENST00000465877 STILQ15468 1287 aa13.6□□□□□ -0.23
COL5A1-206ENST00000465877 KLHL40Q2TBA0 621 aa13.6□□□□□ -0.23
COL5A1-206ENST00000465877 HECTD3Q5T447 861 aa13.6□□□□□ -0.23
COL5A1-206ENST00000465877 TRIM68Q6AZZ1 485 aa13.6□□□□□ -0.23
COL5A1-206ENST00000465877 CC2D1AQ6P1N0 951 aaPredicted RBP13.6□□□□□ -0.23
COL5A1-206ENST00000465877 TFAP2BQ92481 460 aa13.6□□□□□ -0.23
COL5A1-206ENST00000465877 FAM81BQ96LP2 452 aa13.6□□□□□ -0.23
COL5A1-206ENST00000465877 RNF38Q9H0F5 515 aa13.6□□□□□ -0.23
COL5A1-206ENST00000465877 SMPD4Q9NXE4 827 aa13.6□□□□□ -0.23
COL5A1-206ENST00000465877 AJAP1Q9UKB5 411 aaPredicted RBP13.6□□□□□ -0.23
COL5A1-206ENST00000465877 KIAA1257Q9ULG3 409 aa13.6□□□□□ -0.23
COL5A1-206ENST00000465877 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.6□□□□□ -0.23
COL5A1-206ENST00000465877 CNTN6Q9UQ52 1028 aa13.6□□□□□ -0.23
COL5A1-206ENST00000465877 FANCMQ8IYD8 2048 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 MYOFQ9NZM1 2061 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 SHISA7A6NL88 538 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 LEFTY2O00292 366 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 PI15O43692 258 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 CALCAP01258 141 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 CTHP32929 405 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 PLA2G4AP47712 749 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 KPNA1P52294 538 aaPredicted RBP13.59□□□□□ -0.23
COL5A1-206ENST00000465877 MFAP3P55082 362 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 ZXDBP98169 803 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 ADIGQ0VDE8 80 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 KRT31Q15323 416 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 ARHGAP44Q17R89 818 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 ANO6Q4KMQ2 910 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 PKDCCQ504Y2 493 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 RAB41Q5JT25 222 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 LCLAT1Q6UWP7 414 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 ZNF852Q6ZMS4 543 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 AOPEPQ8N6M6 819 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 PRSS33Q8NF86 280 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 OSCP1Q8WVF1 389 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 SHC3Q92529 594 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 ZFRQ96KR1 1074 aaKnown RBP13.59□□□□□ -0.23
COL5A1-206ENST00000465877 FAM83CQ9BQN1 747 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 ZSWIM1Q9BR11 485 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 KCNH6Q9H252 994 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 EBF3Q9H4W6 596 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 NMUR1Q9HB89 426 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 CYLDQ9NQC7 956 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 HPS4Q9NQG7 708 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 CHORDC1Q9UHD1 332 aaPredicted RBP13.59□□□□□ -0.23
COL5A1-206ENST00000465877 WNT6Q9Y6F9 365 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 USP3Q9Y6I4 520 aa13.59□□□□□ -0.23
COL5A1-206ENST00000465877 A0A1W2PQH9 124 aa13.58□□□□□ -0.24
COL5A1-206ENST00000465877 BECN2A8MW95 431 aa13.58□□□□□ -0.24
COL5A1-206ENST00000465877 SPECC1L-ADORA2AF8WAN1 911 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms