RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 MAMLD1Q13495 774 aa14.08□□□□□ -0.15
ATF3-208ENST00000465155 FAM102AQ5T9C2 384 aaPredicted RBP14.08□□□□□ -0.15
ATF3-208ENST00000465155 OLFML1Q6UWY5 402 aa14.08□□□□□ -0.15
ATF3-208ENST00000465155 ADGRD2Q7Z7M1 963 aa14.08□□□□□ -0.15
ATF3-208ENST00000465155 RBM23Q86U06 439 aaKnown RBP14.08□□□□□ -0.15
ATF3-208ENST00000465155 ZDHHC17Q8IUH5 632 aa14.08□□□□□ -0.15
ATF3-208ENST00000465155 NUP93Q8N1F7 819 aa14.08□□□□□ -0.15
ATF3-208ENST00000465155 ZNF564Q8TBZ8 553 aaPredicted RBP14.08□□□□□ -0.15
ATF3-208ENST00000465155 GIPC2Q8TF65 315 aa14.08□□□□□ -0.15
ATF3-208ENST00000465155 NDRG1Q92597 394 aaKnown RBP14.08□□□□□ -0.15
ATF3-208ENST00000465155 PIWIL1Q96J94 861 aaKnown RBP14.08□□□□□ -0.15
ATF3-208ENST00000465155 SPATA17Q96L03 361 aa14.08□□□□□ -0.15
ATF3-208ENST00000465155 ULBP1Q9BZM6 244 aa14.08□□□□□ -0.15
ATF3-208ENST00000465155 MRPL47Q9HD33 250 aaKnown RBP14.08□□□□□ -0.15
ATF3-208ENST00000465155 METTL5Q9NRN9 209 aaKnown RBP14.08□□□□□ -0.15
ATF3-208ENST00000465155 UVRAGQ9P2Y5 699 aa14.08□□□□□ -0.15
ATF3-208ENST00000465155 FBXW11Q9UKB1 542 aa14.08□□□□□ -0.15
ATF3-208ENST00000465155 COG5Q9UP83 839 aa14.08□□□□□ -0.15
ATF3-208ENST00000465155 YIPF1Q9Y548 306 aa14.08□□□□□ -0.15
ATF3-208ENST00000465155 TRANK1O15050 2925 aa14.08□□□□□ -0.16
ATF3-208ENST00000465155 PER2O15055 1255 aa14.08□□□□□ -0.16
ATF3-208ENST00000465155 CLASP2O75122 1294 aaKnown RBP14.08□□□□□ -0.16
ATF3-208ENST00000465155 MOCS3O95396 460 aa14.08□□□□□ -0.16
ATF3-208ENST00000465155 USP17L7P0C7H9 530 aa14.08□□□□□ -0.16
ATF3-208ENST00000465155 MRPS5P82675 430 aaKnown RBP14.08□□□□□ -0.16
ATF3-208ENST00000465155 SLC6A3Q01959 620 aa14.08□□□□□ -0.16
ATF3-208ENST00000465155 PTPROQ16827 1216 aa14.08□□□□□ -0.16
ATF3-208ENST00000465155 DENND5BQ6ZUT9 1274 aa14.08□□□□□ -0.16
ATF3-208ENST00000465155 KREMEN2Q8NCW0 462 aa14.08□□□□□ -0.16
ATF3-208ENST00000465155 SLC7A14Q8TBB6 771 aa14.08□□□□□ -0.16
ATF3-208ENST00000465155 MCEEQ96PE7 176 aa14.08□□□□□ -0.16
ATF3-208ENST00000465155 CNGB3Q9NQW8 809 aa14.08□□□□□ -0.16
ATF3-208ENST00000465155 INSL5Q9Y5Q6 135 aa14.08□□□□□ -0.16
ATF3-208ENST00000465155 MYO7AQ13402 2215 aa14.07□□□□□ -0.16
ATF3-208ENST00000465155 SIGLEC16A6NMB1 481 aa14.07□□□□□ -0.16
ATF3-208ENST00000465155 GRAP2O75791 330 aa14.07□□□□□ -0.16
ATF3-208ENST00000465155 FBXO21O94952 628 aa14.07□□□□□ -0.16
ATF3-208ENST00000465155 ZBED1O96006 694 aa14.07□□□□□ -0.16
ATF3-208ENST00000465155 KRT3P12035 628 aa14.07□□□□□ -0.16
ATF3-208ENST00000465155 DAOAP59103 153 aa14.07□□□□□ -0.16
ATF3-208ENST00000465155 TWF1Q12792 350 aa14.07□□□□□ -0.16
ATF3-208ENST00000465155 MTMR3Q13615 1198 aa14.07□□□□□ -0.16
ATF3-208ENST00000465155 TAF5Q15542 800 aa14.07□□□□□ -0.16
ATF3-208ENST00000465155 PPP1R15BQ5SWA1 713 aa14.07□□□□□ -0.16
ATF3-208ENST00000465155 DCUN1D2Q6PH85 259 aa14.07□□□□□ -0.16
ATF3-208ENST00000465155 CCDC149Q6ZUS6 474 aa14.07□□□□□ -0.16
ATF3-208ENST00000465155 PLCD3Q8N3E9 789 aa14.07□□□□□ -0.16
ATF3-208ENST00000465155 FEZF2Q8TBJ5 459 aa14.07□□□□□ -0.16
ATF3-208ENST00000465155 MRPL38Q96DV4 380 aaKnown RBP14.07□□□□□ -0.16
ATF3-208ENST00000465155 IRX2Q9BZI1 471 aaPredicted RBP14.07□□□□□ -0.16
ATF3-208ENST00000465155 TLE6Q9H808 572 aa14.07□□□□□ -0.16
ATF3-208ENST00000465155 USP3Q9Y6I4 520 aa14.07□□□□□ -0.16
ATF3-208ENST00000465155 SLC38A8A6NNN8 435 aa14.06□□□□□ -0.16
ATF3-208ENST00000465155 ESPNB1AK53 854 aa14.06□□□□□ -0.16
ATF3-208ENST00000465155 RTN3O95197 1032 aaPredicted RBP14.06□□□□□ -0.16
ATF3-208ENST00000465155 C8AP07357 584 aa14.06□□□□□ -0.16
ATF3-208ENST00000465155 EPCAMP16422 314 aa14.06□□□□□ -0.16
ATF3-208ENST00000465155 RNASE9P60153 205 aaKnown RBP14.06□□□□□ -0.16
ATF3-208ENST00000465155 USP46P62068 366 aa14.06□□□□□ -0.16
ATF3-208ENST00000465155 RPL7AP62424 266 aaKnown RBP14.06□□□□□ -0.16
ATF3-208ENST00000465155 TCEAL1Q15170 157 aa14.06□□□□□ -0.16
ATF3-208ENST00000465155 PRPF38BQ5VTL8 546 aaKnown RBP14.06□□□□□ -0.16
ATF3-208ENST00000465155 PM20D1Q6GTS8 502 aa14.06□□□□□ -0.16
ATF3-208ENST00000465155 RNF10Q8N5U6 811 aaKnown RBP14.06□□□□□ -0.16
ATF3-208ENST00000465155 JOSD2Q8TAC2 188 aa14.06□□□□□ -0.16
ATF3-208ENST00000465155 FAM149B1Q96BN6 582 aa14.06□□□□□ -0.16
ATF3-208ENST00000465155 BTBD6Q96KE9 485 aa14.06□□□□□ -0.16
ATF3-208ENST00000465155 CEP295NLQ96MC4 621 aa14.06□□□□□ -0.16
ATF3-208ENST00000465155 TRIM7Q9C029 511 aa14.06□□□□□ -0.16
ATF3-208ENST00000465155 FBXO44Q9H4M3 255 aa14.06□□□□□ -0.16
ATF3-208ENST00000465155 MAN1C1Q9NR34 630 aa14.06□□□□□ -0.16
ATF3-208ENST00000465155 ANAPC7Q9UJX3 599 aa14.06□□□□□ -0.16
ATF3-208ENST00000465155 MAGED2Q9UNF1 606 aaPredicted RBP14.06□□□□□ -0.16
ATF3-208ENST00000465155 CAPN6Q9Y6Q1 641 aa14.06□□□□□ -0.16
ATF3-208ENST00000465155 YJEFN3A6XGL0 299 aa14.05□□□□□ -0.16
ATF3-208ENST00000465155 E7ENQ6 273 aa14.05□□□□□ -0.16
ATF3-208ENST00000465155 SART1O43290 800 aaKnown RBP14.05□□□□□ -0.16
ATF3-208ENST00000465155 MTA2O94776 668 aa14.05□□□□□ -0.16
ATF3-208ENST00000465155 LRG1P02750 347 aa14.05□□□□□ -0.16
ATF3-208ENST00000465155 YWHAQP27348 245 aa14.05□□□□□ -0.16
ATF3-208ENST00000465155 RFC1P35251 1148 aaPredicted RBP14.05□□□□□ -0.16
ATF3-208ENST00000465155 SCNN1AP37088 669 aa14.05□□□□□ -0.16
ATF3-208ENST00000465155 NRIP1P48552 1158 aa14.05□□□□□ -0.16
ATF3-208ENST00000465155 EPHB3P54753 998 aa14.05□□□□□ -0.16
ATF3-208ENST00000465155 HADHBP55084 474 aaKnown RBP14.05□□□□□ -0.16
ATF3-208ENST00000465155 PLD1Q13393 1074 aa14.05□□□□□ -0.16
ATF3-208ENST00000465155 VEPH1Q14D04 833 aa14.05□□□□□ -0.16
ATF3-208ENST00000465155 IFI16Q16666 785 aaKnown RBP14.05□□□□□ -0.16
ATF3-208ENST00000465155 EFHC1Q5JVL4 640 aa14.05□□□□□ -0.16
ATF3-208ENST00000465155 SLC26A9Q7LBE3 791 aa14.05□□□□□ -0.16
ATF3-208ENST00000465155 BHLHA9Q7RTU4 235 aa14.05□□□□□ -0.16
ATF3-208ENST00000465155 SCML4Q8N228 414 aa14.05□□□□□ -0.16
ATF3-208ENST00000465155 EMC1Q8N766 993 aa14.05□□□□□ -0.16
ATF3-208ENST00000465155 TPCN2Q8NHX9 752 aa14.05□□□□□ -0.16
ATF3-208ENST00000465155 SLC22A17Q8WUG5 538 aa14.05□□□□□ -0.16
ATF3-208ENST00000465155 IRGQQ8WZA9 623 aa14.05□□□□□ -0.16
ATF3-208ENST00000465155 KHSRPQ92945 711 aaKnown RBP eCLIP14.05□□□□□ -0.16
ATF3-208ENST00000465155 PLEKHA4Q9H4M7 779 aa14.05□□□□□ -0.16
ATF3-208ENST00000465155 TMEM59LQ9UK28 342 aa14.05□□□□□ -0.16
ATF3-208ENST00000465155 HCFC2Q9Y5Z7 792 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms