RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 ENAHQ8N8S7 591 aaPredicted RBP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 MIGA1Q8NAN2 632 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 ICA1LQ8NDH6 482 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 CDC26Q8NHZ8 85 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 C1orf216Q8TAB5 229 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 SNX29Q8TEQ0 813 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 CKAP2Q8WWK9 683 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 TMIGD2Q96BF3 282 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 CRAMP1Q96RY5 1269 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 C17orf80Q9BSJ5 609 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 SENP6Q9GZR1 1112 aaPredicted RBP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 ANKRD2Q9GZV1 360 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 PABPC3Q9H361 631 aaKnown RBP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 TP63Q9H3D4 680 aaPredicted RBP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 MCM9Q9NXL9 1143 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 RNF14Q9UBS8 474 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 BCAP29Q9UHQ4 241 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 DAPK2Q9UIK4 370 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 PHTF1Q9UMS5 762 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 SNX24Q9Y343 169 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 TACC3Q9Y6A5 838 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 MYH8P13535 1937 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 A0A0G2JND7 137 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 A0A1W2PRG0 241 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 GRID2IPA4D2P6 1211 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 LGALS16A8MUM7 142 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 TMX2-CTNND1H3BSU7 103 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 INO80B-WBP1J3KQ70 363 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 HDAC3O15379 428 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 AOC2O75106 756 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 PHF2O75151 1096 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 MYO1DO94832 1006 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 ARHGEF15O94989 841 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 SEMA3DO95025 777 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 ACSL3O95573 720 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 RBP3P10745 1247 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 SNRPBP14678 240 aaKnown RBP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 ATF4P18848 351 aaPredicted RBP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 CDH2P19022 906 aaPredicted RBP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 JAK1P23458 1154 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 EVI2BP34910 448 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 MAGEA4P43358 317 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 PIP4K2AP48426 406 aaPredicted RBP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 NCKAP1LP55160 1127 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 SEC13P55735 322 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 RPS3AP61247 264 aaKnown RBP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 PHC1P78364 1004 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 RELBQ01201 579 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 ARID5AQ03989 594 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 CETN1Q12798 172 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 AUHQ13825 339 aaKnown RBP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 RAPGEF1Q13905 1077 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 GK3PQ14409 553 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 GRM2Q14416 872 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 RPS6KA1Q15418 735 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 MEA1Q16626 185 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 MTHFSDQ2M296 383 aaKnown RBP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 SLC9C1Q4G0N8 1177 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 ANKRD20A4Q4UJ75 823 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 SNAP47Q5SQN1 464 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 PERM1Q5SV97 790 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 LCE2AQ5TA79 106 aaPredicted RBP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 NT5DC1Q5TFE4 455 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 SULT6B1Q6IMI4 303 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 NANOGP8Q6NSW7 305 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 TTI2Q6NXR4 508 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 LVRNQ6Q4G3 990 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 RIPOR1Q6ZS17 1223 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 ARHGEF18Q6ZSZ5 1173 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 UNC13DQ70J99 1090 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 C11orf96Q7Z7L8 435 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 RALYLQ86SE5 291 aaKnown RBP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 SNX32Q86XE0 403 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 ERI1Q8IV48 349 aaKnown RBP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 SRRM1Q8IYB3 904 aaKnown RBP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 TMEFF1Q8IYR6 380 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 ANKRD13AQ8IZ07 590 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 SSH3Q8TE77 659 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 GDPD5Q8WTR4 605 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 CLP1Q92989 425 aaKnown RBP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 PHKBQ93100 1093 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 BORCS5Q969J3 196 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 FBXL18Q96ME1 805 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 CITED4Q96RK1 184 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 HEMGNQ9BXL5 484 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 RBM38Q9H0Z9 239 aaKnown RBP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 NAPBQ9H115 298 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 TMEM60Q9H2L4 133 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 EPB41L1Q9H4G0 881 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 TRIM39Q9HCM9 518 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 FARSBQ9NSD9 589 aaKnown RBP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 ARL8BQ9NVJ2 186 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 ABI2Q9NYB9 513 aaPredicted RBP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 NCKIPSDQ9NZQ3 722 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 ARHGAP20Q9P2F6 1191 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 KLHL42Q9P2K6 505 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 SLC8A2Q9UPR5 921 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms