RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 VAV1P15498 845 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 RPL13P26373 211 aaKnown RBP9.08□□□□□ -0.96
SHQ1-203ENST00000463369 SREBF1P36956 1147 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 STAT1P42224 750 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 KCNJ1P48048 391 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 CD151P48509 253 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 SLC18A1P54219 525 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 HADHBP55084 474 aaKnown RBP9.08□□□□□ -0.96
SHQ1-203ENST00000463369 RPS6P62753 249 aaKnown RBP9.08□□□□□ -0.96
SHQ1-203ENST00000463369 SPARCL1Q14515 664 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 CALCRLQ16602 461 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 PDK4Q16654 411 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 TMEM266Q2M3C6 531 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 KRT79Q5XKE5 535 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 MZT2BQ6NZ67 158 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 RNF207Q6ZRF8 634 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 SPATA24Q86W54 205 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 ARL10Q8N8L6 244 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 ZNF398Q8TD17 642 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 SNX29Q8TEQ0 813 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 WDR60Q8WVS4 1066 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 MAML1Q92585 1016 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 KRT35Q92764 455 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 PTCD3Q96EY7 689 aaKnown RBP9.08□□□□□ -0.96
SHQ1-203ENST00000463369 RAB34Q9BZG1 259 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 BMP2KQ9NSY1 1161 aaPredicted RBP9.08□□□□□ -0.96
SHQ1-203ENST00000463369 EURLQ9NYK6 297 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 MORF4L1Q9UBU8 362 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 MTUS1Q9ULD2 1270 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 SNX5Q9Y5X3 404 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 ZNF236Q9UL36 1845 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 ADGRA2Q96PE1 1338 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 TCRBV7S2A1N4TA0A589 114 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 PRPF4O43172 522 aaKnown RBP eCLIP9.08□□□□□ -0.96
SHQ1-203ENST00000463369 THAP12O43422 761 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 CYP3A4P08684 503 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 CHRNB2P17787 502 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 NR2F2P24468 414 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 NOGQ13253 232 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 AGAP9Q5VTM2 703 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 GJB7Q6PEY0 223 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 SPATC1Q76KD6 591 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 OTOP3Q7RTS5 596 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 CCDC65Q8IXS2 484 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 ST13P4Q8IZP2 240 aaPredicted RBP9.08□□□□□ -0.96
SHQ1-203ENST00000463369 FAM169BQ8N8A8 192 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 ZNF454Q8N9F8 522 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 C12orf50Q8NA57 414 aaPredicted RBP9.08□□□□□ -0.96
SHQ1-203ENST00000463369 KCT2Q8NC54 265 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 SHCBP1Q8NEM2 672 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 GPRC5AQ8NFJ5 357 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 SYTL5Q8TDW5 730 aaPredicted RBP9.08□□□□□ -0.96
SHQ1-203ENST00000463369 IRGQQ8WZA9 623 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 SLCO2A1Q92959 643 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 NSL1Q96IY1 281 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 ZIC5Q96T25 663 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 POP1Q99575 1024 aaKnown RBP9.08□□□□□ -0.96
SHQ1-203ENST00000463369 ECSITQ9BQ95 431 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 LBHD1Q9BQE6 289 aaPredicted RBP9.08□□□□□ -0.96
SHQ1-203ENST00000463369 ZSWIM1Q9BR11 485 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 CCDC77Q9BR77 488 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 SYT11Q9BT88 431 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 THAP2Q9H0W7 228 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 NINJ2Q9NZG7 142 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 COL20A1Q9P218 1284 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 ANGPTL2Q9UKU9 493 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 GRID1Q9ULK0 1009 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 NUMBLQ9Y6R0 609 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 WASF2Q9Y6W5 498 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 FRMPD4Q14CM0 1322 aa9.07□□□□□ -0.96
SHQ1-203ENST00000463369 TMEM221A6NGB7 291 aa9.07□□□□□ -0.96
SHQ1-203ENST00000463369 POTEMA6NI47 508 aa9.07□□□□□ -0.96
SHQ1-203ENST00000463369 TOR1BO14657 336 aa9.07□□□□□ -0.96
SHQ1-203ENST00000463369 PYGMP11217 842 aa9.07□□□□□ -0.96
SHQ1-203ENST00000463369 PIM1P11309 404 aaPredicted RBP9.07□□□□□ -0.96
SHQ1-203ENST00000463369 CRABP2P29373 138 aa9.07□□□□□ -0.96
SHQ1-203ENST00000463369 SOX5P35711 763 aa9.07□□□□□ -0.96
SHQ1-203ENST00000463369 MARCKSL1P49006 195 aa9.07□□□□□ -0.96
SHQ1-203ENST00000463369 ROR1Q01973 937 aa9.07□□□□□ -0.96
SHQ1-203ENST00000463369 DSG1Q02413 1049 aa9.07□□□□□ -0.96
SHQ1-203ENST00000463369 BAATQ14032 418 aaPredicted RBP9.07□□□□□ -0.96
SHQ1-203ENST00000463369 STAT4Q14765 748 aa9.07□□□□□ -0.96
SHQ1-203ENST00000463369 CBX2Q14781 532 aaPredicted RBP9.07□□□□□ -0.96
SHQ1-203ENST00000463369 SIX1Q15475 284 aaPredicted RBP9.07□□□□□ -0.96
SHQ1-203ENST00000463369 SEL1L2Q5TEA6 688 aa9.07□□□□□ -0.96
SHQ1-203ENST00000463369 C11orf63Q6NUN7 778 aa9.07□□□□□ -0.96
SHQ1-203ENST00000463369 MOXD1Q6UVY6 613 aa9.07□□□□□ -0.96
SHQ1-203ENST00000463369 IZUMO2Q6UXV1 221 aa9.07□□□□□ -0.96
SHQ1-203ENST00000463369 NSMFQ6X4W1 530 aa9.07□□□□□ -0.96
SHQ1-203ENST00000463369 OTOAQ7RTW8 1153 aa9.07□□□□□ -0.96
SHQ1-203ENST00000463369 SLC13A5Q86YT5 568 aaPredicted RBP9.07□□□□□ -0.96
SHQ1-203ENST00000463369 RHOT2Q8IXI1 618 aa9.07□□□□□ -0.96
SHQ1-203ENST00000463369 VPS52Q8N1B4 723 aa9.07□□□□□ -0.96
SHQ1-203ENST00000463369 RIBC1Q8N443 379 aaPredicted RBP9.07□□□□□ -0.96
SHQ1-203ENST00000463369 SLAIN1Q8ND83 568 aa9.07□□□□□ -0.96
SHQ1-203ENST00000463369 NINJ1Q92982 152 aa9.07□□□□□ -0.96
SHQ1-203ENST00000463369 PPP2R3CQ969Q6 453 aa9.07□□□□□ -0.96
SHQ1-203ENST00000463369 MCUR1Q96AQ8 359 aa9.07□□□□□ -0.96
SHQ1-203ENST00000463369 DYDC2Q96IM9 177 aa9.07□□□□□ -0.96
SHQ1-203ENST00000463369 CAPNS2Q96L46 248 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms